prot_H-elongata_contig875.16285.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig875.16285.1 vs. uniprot
Match: A0A6H5JGQ1_9PHAE (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ1_9PHAE) HSP 1 Score: 607 bits (1566), Expect = 5.340e-209 Identity = 333/526 (63.31%), Postives = 387/526 (73.57%), Query Frame = 0
Query: 3 ATVMARRTELKIQVSPMCRKVPEHPPALPISAPPAARARREETVRLIEKSREAMEKRRDAKRLQGVKPRTNGIQASRAVPDISR-SPAHPSHSSLANGFGAAVGMKRNLYEDDTGEAGEAGEATTEAERQLQREENARVLCVEVEWLLEHPRSGIVFKRATLEDQFSASHAYTTYSNAPIDFDGPRCWFPCLDHPSLLIAYDVEVVVSSPKIIAVFNGKLLEKTSTDDEEG--------GGI-----------SIVYRFATETLTTARALGLAVGRFGEWDVPQSPRVKGVFLRAANAGVPSAIAKNVEGMKSRDRRAADKSTSAALANLLAHVPLAVSFLEDWLKAEYPFKRCTYVFVEGLSELFSPFGSLCLVKAELLVRAQDRIPEGDLPGDAKLSVVEVLLYGWVSTALRLEGGKHRWLLHGIAGYLLTQFAAEFRGEEEKQHRLWRAMQRVVALDCDLGCPSMCPPTPDLYIPDVIDPATAYYTRLKAALILHMIEVKLQPTDLQDALGQLMVPIALHVRD 508
A+ + ELKIQV +K+P+ PP +AP AARARR+ET RLI KSR+ +E+RR+ KR QG + +G P+IS SPAHPS S AN + M DD G AT EA RQ +REE+A+V+CVEVEW L HPRSG+VFK A + FSA+H YTTYS+AP+D DGPRCWFPC+DH S+LI+YDV V V+SPKI A FNG+LLE T+ DD++G GG S YRF+TETLT ARA+GLAVGRF WDVP SPRVKG+ L+AA+AG MKS RRA D S AA +LLAHVP AVSFLEDWLKA+YPFKRCT VFVEGL ++F+PFGSLCL+KAELL DRIP+GDLPGDA+LS VEVLLYGWVSTALRLEGGKHRWL+HGIAG+LLT+FAAE RGEEEKQHRLWRA+Q+ VALDCDLGCPS+ PPTPDLYIPD IDPATAYY RLKA LILHM EVK+QP D+QDALG +M PIALHVRD
Sbjct: 102 ASSQSNNGELKIQVPANSQKIPQLPPE---TAPSAARARRDETARLIHKSRQ-VEERRETKRKQGSR---SGFAPQ--SPEISMMSPAHPSPGSNAN-MDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAA--REGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESTTLDDDDGXXXXXXANGGTDGMAVRKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPHSPRVKGLVLKAASAGGGGRAGT----MKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWRAVQKAVALDCDLGCPSISPPTPDLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVRD 611
BLAST of mRNA_H-elongata_contig875.16285.1 vs. uniprot
Match: D7G4X2_ECTSI (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X2_ECTSI) HSP 1 Score: 622 bits (1603), Expect = 3.300e-204 Identity = 350/562 (62.28%), Postives = 404/562 (71.89%), Query Frame = 0
Query: 3 ATVMARRTELKIQVSPMCRKVPEHPPALPISAPPAARARREETVRLIEKSREAMEKRRDAKRLQGVKPRTNGIQASRAVPDISR-SPAHPSHSSLANGFGAAVGMKRNLYEDDTGEAGEAGEATTEAERQLQREENARVLCVEVEWLLEHPRSGIVFKRATLEDQFSASHAYTTYSNAPIDFDGPRCWFPCLDHPSLLIAYDVEVVVSSPKIIAVFNGKLLEKTSTDDE---------EGG----------GISIVYRFATETLTTARALGLAVGRFGEWDVPQSPRVKGVFLRAANAGVPSAIAKNVEGMKSRDRRAADKSTSAALANLLAHVPLAVSFLEDWLKAEYPFKRCTYVFVEGLSELFSPFGSLCLVKAELLVRAQDRIPEGDLPGDAKLSVVEVLLYGWVSTALRLEGGKHRWLLHGIAGYLLTQFAAEFRGEEEKQHRLWRAMQRVVALDCDLGCPSMCPPTPDLYIPDVIDPATAYYTRLKAALILHMIEVKLQPTDLQDALGQLMVPIALHVRDE--DPFLRRQ----------SSFSQGQLMRQASASA 532
A+ + ELKIQV +K+P+ PP LP +AP AARARR+ET RLI KSR+ +E+RR+AKR QG + +G P+IS SPAHPS S AN + M DD G AT EA RQ +REE+A+V+CVEVEW L HPRSG+VFK A + FSA+H YTTYS+AP+D DGPRCWFPC+DH S+LI+YDV V V+SPKI A FNG+LLE + DD+ GG S YRF+TETLT ARA+GLAVGRF WDVPQSPRVKG+ LRAA+AG MKS RRA D S A +LLAHVP AVSFLEDWLKA+YPFKRCT VFVEGL ++F+PFGSLCL+KAELL DRIP+GDLPGDA+LS VEVLLYGWVSTALRLEGGKHRWL+HGIAG+LLT+FAAE RGEEEKQHRLW A+Q+ VALDCDLGCPS+ PPT DLYIPD IDPATAYY RLKA LILHM EVK+QP D+QDALG +M PIALHVR+E D LRRQ SS SQGQL RQASA +
Sbjct: 102 ASSQSNNGELKIQVPANSKKIPQLPPDLPETAPSAARARRDETARLIHKSRQ-VEERREAKRKQGSR---SGFAPQ--SPEISMMSPAHPSPGSNAN-MDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAA--REGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESITLDDDXXXXGDVGVNGGTDGMAVGKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASAGGGGRSGT----MKSERRRAVDNSLIAGAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALRRQTSTFSLSRQPSSLSQGQLSRQASADS 650
BLAST of mRNA_H-elongata_contig875.16285.1 vs. uniprot
Match: A0A836CI26_9STRA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI26_9STRA) HSP 1 Score: 152 bits (385), Expect = 8.110e-35 Identity = 120/429 (27.97%), Postives = 166/429 (38.69%), Query Frame = 0
Query: 170 SHAYTTYSNAPIDFDGPRCWFPCLDHPSLLIAYDVEVVVSSPKIIAVFNGKLLEKTSTDDEEGGGISIVY--------------------------------RFATETLTTARALGLAVGRFGEWDVPQSPRVKGVFL-------RAANAGVPSAIAKNVEGMKSRDRRAADKSTSAALANLLAHVPLAVSFLEDWLKAEYPFKRCTYVFVEGLSELFSPFGSLCLVKAELLVRAQD-------RIPEGDLPGDAKLSVVEVLLY----------------------------------------GWVSTALRLEGGKHRWLLHGIAGYLLTQFAAEFRGEEEKQ---------HRLWRAMQRVVALDCDLGCPSMCPPTPDLYIPDVIDPATAYYTRLKAALILHMIEVKLQPTDLQDALGQLMVPIA 503
+H TTY++ +D DGPRCWFPC+D P+ + E+V+ P FAT+T TTAR +GLAVG F W P +PR+ G +L + + +A LA + V+F ++WL +YPF+ T+VFV GL +PFG L L++ ELL R+P+ + GD +V E LL GW TALRL RWL H AGY+L + RG + Q RLWR M+ V+A D +LG S+ PP LY P+ ++ A TR KAAL+L M+ ++ LQ AL M +A
Sbjct: 185 AHCRTTYAHGAVDVDGPRCWFPCVDAPAQSCVF--ELVLDLPSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXPLPRARRLHFATDTCTTARGVGLAVGPFQHWVDPLAPRLHGYYLVPDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRAEQVARTLAALRSVVTFAQEWLNVDYPFQTATHVFVGGLEGRHAPFGGLVLLRDELLCPIDPCAHAPPPRLPDDNAHGDTHAAVAEGLLLDKLLSPPSRPPLCXXXXXXXXXXXXXXXXXXXXXXXXXXLGWAQTALRLAHSFERWLHHAFAGYMLELYIEAKRGRDVAQVTARSDAQYARLWRLMEAVIARDAELGGASIRPPDAALYAPEALERGVARLTRAKAALLLLMLRARIGRDALQRALRARMDALA 611
BLAST of mRNA_H-elongata_contig875.16285.1 vs. uniprot
Match: A0A183IML7_9BILA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IML7_9BILA) HSP 1 Score: 57.8 bits (138), Expect = 5.580e-5 Identity = 90/406 (22.17%), Postives = 150/406 (36.95%), Query Frame = 0
Query: 139 RVLCVEVEWLLEHPRSGIVF----------KRATLEDQFSASHAYTTYSNAPIDFDGPRCWFPCLDHPSLLIAYDVEVVVSSPKIIAVFNGKLLEKTSTDDEEGGGISIVYRFATETLTTARALGLAVGRFGEWDVPQSPRVKGVFLRAANAGVPSAIAKNVEGMKSRDRRAADKSTSAALANLLAHVPLAVSFLEDWLKAEYPFKRCTYVFVEGLSELFSPFGSLCLVKAELLVRAQDRIPEGDLPGDAKLSVVEVLLYGWVS--TALRLEGG--------------KHRWLLHGIAGYLLTQFAAEFRGEEEKQHRLWRAMQRVVALDCDLGCPSMCPP----TPDLYIPDVIDPATA---YYTRL--KAALILHMIEVKLQPTDLQDALGQLMVPIALHVRDE 509
+V+ V +++ LE+P G F ++ D + SH Y+ + A + R WFPC+D PS L + +EV IAV +G L+ +T+ + Y + T A +G AVG F + P+ + +N P + L++ + A F E+ L YP+ VFV + E + SL L+ L + I + + V +G V ++ +G K RWL G A Y+ + F G E + ++ + V + G + P T + D ++P T Y L KA+L+ M+E KL L +L+ + HV +
Sbjct: 131 KVIRVGIDFRLENPTVGCNFVCPVLPSDMPSTSSSSDGLANSHVYS-WKRAEYE---ARAWFPCIDVPSELCTWKIEVTCDR-SFIAVCSGDLMGVGNTNGRD------TYSYQVTIPTPACNIGFAVGHFKLFVHPEMNEL-------SNFCPPDLL--------------------PLLSHTCKKLHKAFEFFEELLSFRYPYSSYKLVFVNDIPEDMISYLSLTLMDVRFL-HHKTIIEQEPVVRSLMARAVAQQFFGIVCFYCIVKHDGDVCTVAGCYVMPYNWKDRWLAWGAADYISRLYVQRFFGNNEYLYTIYELLNDVTHYEKKFGGIVLSGPKGQRTASGFYFDPLNPFTCSPLYVEMLVKKASLVFRMLEKKLGKELFFQVLNKLLT-VGAHVTQQ 496 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig875.16285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig875.16285.1 ID=prot_H-elongata_contig875.16285.1|Name=mRNA_H-elongata_contig875.16285.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=651bpback to top |