prot_H-elongata_contig12126.1628.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12126.1628.1
Unique Nameprot_H-elongata_contig12126.1628.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A6H5JF01_9PHAE (Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF01_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.040e-46
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWRRVL 83
            M+D+MC FALETSQEAFQLTITKGQVFTTIAS IR+AFEK++GRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVL+WR VL
Sbjct:   13 MSDEMCHFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVL 95          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: D7FQ30_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ30_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.080e-46
Identity = 74/83 (89.16%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWRRVL 83
            M+D+MCQFALETSQEAFQLTITKGQVFTTIAS IR+AFEK++GRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVL+WR V+
Sbjct:   13 MSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVV 95          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A836CC04_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC04_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.120e-43
Identity = 66/80 (82.50%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            MTDDMCQFAL+TS+EAF LTI KGQVFT IAS+IR+ FEK +GRGWNVVVGR+FGAYVTHEIKTYMYFTV+PGVYVL+W+
Sbjct:   13 MTDDMCQFALKTSEEAFHLTINKGQVFTAIASYIRRTFEKTYGRGWNVVVGRAFGAYVTHEIKTYMYFTVIPGVYVLIWK 92          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A482S6R4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6R4_9ARCH)

HSP 1 Score: 106 bits (264), Expect = 1.100e-27
Identity = 47/80 (58.75%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            M+++  + A++ +++AF LTI  G V +TIA FIR+ F++ H RGWN +VGRSFGAYVTHEIKTY+YFTV PG YVL+W+
Sbjct:   49 MSEEWSKDAIKAARDAFALTIASGDVHSTIADFIRKKFDRDHERGWNCIVGRSFGAYVTHEIKTYIYFTVQPGTYVLLWK 128          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A485KYL8_9STRA (Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KYL8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.840e-27
Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            MTD M +  + T+++AFQL +  G+ F+TIA F+R+  EK +GRGWN +VG SFGAYVTHEIKTY+YF+V  GV VLVWR
Sbjct:   18 MTDVMLEKVVATAKDAFQLQVASGKTFSTIAEFVRRNMEKEYGRGWNCIVGLSFGAYVTHEIKTYVYFSVASGVSVLVWR 97          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A0P1AY91_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY91_PLAHL)

HSP 1 Score: 103 bits (257), Expect = 5.420e-27
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            MTD M    L T+++AFQL +T  + F+TIA F+R+  EK +GRGWN VVG SFGAYVTHEIKTY+YF+V  GV VLVW+
Sbjct:   19 MTDAMLDKVLSTAKDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAIGVSVLVWK 98          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A225VFG7_9STRA (Dynein light chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VFG7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 9.030e-26
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWRRVL 83
            MTD M + AL T+++AFQL +T  + F+TIA F+R+  EK +GRGWN VVG SFGAYVTHEIKTY+YF+V  GV VLVW+  L
Sbjct:   19 MTDVMLEKALSTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVLVWKTYL 101          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: H3HCG0_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3HCG0_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 2.290e-25
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVL 77
            MTD M + AL T+++AFQL +T  + F+TIA F+R+  EK +GRGWN VVG SFGAYVTHEIKTY+YF+V  GV VL
Sbjct:   19 MTDAMLEKALGTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVL 95          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A7S4E7C9_9STRA (Dynein light chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7C9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.910e-25
Identity = 45/80 (56.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            M+++   F LE + +AF     +G+V++ +A+FIR A EK +G+GWNVVVG+SFGA+VTHEIKTY Y +VVPGV VL+WR
Sbjct:   13 MSEEKVDFCLEIATDAFNQASFQGKVYSYVANFIRAALEKQYGKGWNVVVGKSFGAFVTHEIKTYFYGSVVPGVCVLIWR 92          
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Match: A0A7S3H299_9STRA (Dynein light chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H299_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.210e-24
Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    1 MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLVWR 80
            M+++  + A + +++AF +TI+ G   +TIA FIR+ F+  H  GWN +VGRSFGAYVTHEIKTY YF+V PG YVL+WR
Sbjct:   37 MSEEWARDAQKIARDAFAITISSGDAHSTIADFIRKKFDVGHMAGWNCIVGRSFGAYVTHEIKTYTYFSVQPGTYVLLWR 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12126.1628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF01_9PHAE2.040e-4689.16Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7FQ30_ECTSI3.080e-4689.16Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CC04_9STRA1.120e-4382.50Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A482S6R4_9ARCH1.100e-2758.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A485KYL8_9STRA1.840e-2760.00Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4... [more]
A0A0P1AY91_PLAHL5.420e-2761.25Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]
A0A225VFG7_9STRA9.030e-2661.45Dynein light chain n=1 Tax=Phytophthora megakarya ... [more]
H3HCG0_PHYRM2.290e-2562.34Dynein light chain n=21 Tax=Oomycota TaxID=4762 Re... [more]
A0A7S4E7C9_9STRA3.910e-2556.25Dynein light chain n=1 Tax=Pelagomonas calceolata ... [more]
A0A7S3H299_9STRA1.210e-2455.00Dynein light chain n=1 Tax=Spumella elongata TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..81
e-value: 1.9E-17
score: 74.0
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 1..80
e-value: 2.7E-21
score: 75.7
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..80
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..81
e-value: 8.7E-22
score: 79.1
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 1..80
NoneNo IPR availablePANTHERPTHR11886:SF64coord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12126contigH-elongata_contig12126:3075..3831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12126.1628.1mRNA_H-elongata_contig12126.1628.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12126 3075..3846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12126.1628.1 ID=prot_H-elongata_contig12126.1628.1|Name=mRNA_H-elongata_contig12126.1628.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MTDDMCQFALETSQEAFQLTITKGQVFTTIASFIRQAFEKAHGRGWNVVV
GRSFGAYVTHEIKTYMYFTVVPGVYVLVWRRVLFPTFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf