mRNA_H-elongata_contig87451.16279.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig87451.16279.1
Unique NamemRNA_H-elongata_contig87451.16279.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 7.340e-84
Identity = 119/162 (73.46%), Postives = 148/162 (91.36%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V +WD S +GPD +E DGRSY+SAVSEVI + S+TC+GRAK++MGEARMDIEDSEMGYLGY+ S+SYGLTWKVRGFC++K+N ++F++V+VYGNIY+SDIHHN+FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VY+N YHGIIAS+RCN
Sbjct:  153 KVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCN 314          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.160e-83
Identity = 118/162 (72.84%), Postives = 143/162 (88.27%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V SWD ST+ PD +ETDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE SE+GYLGY+ S+SYGLTWKVRGFC +K+N E+FD+V+VYGN+Y+SDIHH +FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VYNN YHGIIAS+RCN
Sbjct:  156 KVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCN 317          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 2.080e-82
Identity = 118/162 (72.84%), Postives = 143/162 (88.27%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V SWD ST+ PD +ETDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE SE+GYLGY+ S+SYGLTWKVRGFC +K+N E+FD+V+VYGN+Y+SDIHH +FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VYNN YHGIIAS+RCN
Sbjct:  156 KVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCN 317          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.630e-81
Identity = 116/162 (71.60%), Postives = 145/162 (89.51%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V +WD S + PD +E+DGRSYISAVSEVI +  +TC+GRAK++MGEARMDIE+SEM YLGY+ +++YGLTWKVRGFC++K N E+FD+V+VYGNIY+SDIHHN+FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN V+NN YHGIIAS+RCN
Sbjct:  127 KVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCN 288          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 3.650e-81
Identity = 118/162 (72.84%), Postives = 142/162 (87.65%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V SWD ST+ PD +ETDGRSYISAVSE++ +  ETC+G AK+ MGEARMDIE+SE+GYLG+  S+SYGLTWKVRGFC +K+N EIFD+V+VYGN+Y+SDIHH  FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VYNN YHGIIAS+RCN
Sbjct:  160 KVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCN 321          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 9.380e-81
Identity = 115/164 (70.12%), Postives = 140/164 (85.37%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHG--IIASRRCN 510
            +V SWD ST+ PD +ETDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE SE+GYLGY+ S+SYGLTWKVRGFC +K+N E+FD+V+VYGN+Y+SDIHH +FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VYNN YHG   + SRR N
Sbjct:   50 KVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGEAAVRSRRTN 213          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 7.870e-76
Identity = 110/154 (71.43%), Postives = 132/154 (85.71%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHG 486
            +V SWD ST+ PD +ETDGRSYISA+SE+I +  ETC+G AK+ MGEARMDIE+SE+GYLG+  S+SYGLTWKVRGFC +K+N  IFDEV+VYGN+Y+SDIHH  FG+YTYGHQQGDWR + M DN+GYGFDPHDDSD++TIHDN VYNN  HG
Sbjct:  159 KVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.640e-74
Identity = 106/162 (65.43%), Postives = 144/162 (88.89%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V  WD + +  D++ETDGRSYISAVSE++++ ++TC+G AK+ MGEARMDI +SEMGY+G++ S+SYGLTWKVRGFC +K+N E+FD+V+VYGNIY+S++HH +F +YTYGHQQGDWR +T+  N+GYG+DPHDDSD++TIHDNVVY+N++HGIIAS+RCN
Sbjct:  245 KVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCN 406          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 239 bits (611), Expect = 2.860e-74
Identity = 111/162 (68.52%), Postives = 135/162 (83.33%), Query Frame = 1
Query:   25 QVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            +V +WD S +    +++ GRSYISAVSEVI ++ + CDGRAK +MGEARMDIEDSEM YLGY+ S+SYGLTWKVRG C + +N E+FD V+VYGNIY+SDIHHN+FG+YTYGH+QGDWR + M  NT YGFDPHDDSD++TIHDN VYNN  HGIIAS+RCN
Sbjct:  153 KVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCN 314          
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 9.760e-68
Identity = 98/135 (72.59%), Postives = 115/135 (85.19%), Query Frame = 1
Query:  106 EVIVNASETCDGRAKSDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDVYGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITIHDNVVYNNSYHGIIASRRCN 510
            E+I ++ E C+G+AK  MGEARMDIEDSEM YLGY  S+SYGLTWKVRGFC + +N E+FDEV+VYGNIY+SDIHHNHFG+YTYGH+QGDWR + M  N  YGFDPHDDSD++TIHDN VYNN  HGIIAS+RCN
Sbjct:    6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCN 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87451.16279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XAJ7_9PHAE7.340e-8473.46Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE5_ECTSI1.160e-8372.84Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.080e-8272.84Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE2.630e-8171.60Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI3.650e-8172.84Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KES9_9PHAE9.380e-8170.12MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A6H5JU98_9PHAE7.870e-7671.43MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LD45_ECTSI1.640e-7465.43Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA2.860e-7468.52Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAJ9_9PHAE9.760e-6872.59Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87451contigH-elongata_contig87451:915..2346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.9
Seed ortholog evalue3.2e-44
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons3
Model size510
Cds size510
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87451.16279.1prot_H-elongata_contig87451.16279.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig87451 915..2346 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931274.750525-CDS-H-elongata_contig87451:914..11571622931274.750525-CDS-H-elongata_contig87451:914..1157Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 915..1157 +
1691679769.1816664-CDS-H-elongata_contig87451:914..11571691679769.1816664-CDS-H-elongata_contig87451:914..1157Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 915..1157 +
1622931274.768975-CDS-H-elongata_contig87451:1585..16211622931274.768975-CDS-H-elongata_contig87451:1585..1621Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 1586..1621 +
1691679769.1923292-CDS-H-elongata_contig87451:1585..16211691679769.1923292-CDS-H-elongata_contig87451:1585..1621Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 1586..1621 +
1622931274.7810144-CDS-H-elongata_contig87451:2115..23461622931274.7810144-CDS-H-elongata_contig87451:2115..2346Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 2116..2346 +
1691679769.2012436-CDS-H-elongata_contig87451:2115..23461691679769.2012436-CDS-H-elongata_contig87451:2115..2346Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87451 2116..2346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig87451.16279.1

>prot_H-elongata_contig87451.16279.1 ID=prot_H-elongata_contig87451.16279.1|Name=mRNA_H-elongata_contig87451.16279.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
MVVSQSTNQVISWDNSTSGPDVNETDGRSYISAVSEVIVNASETCDGRAK
SDMGEARMDIEDSEMGYLGYYASKSYGLTWKVRGFCLNKTNTEIFDEVDV
YGNIYNSDIHHNHFGIYTYGHQQGDWRNSTMRDNTGYGFDPHDDSDYITI
HDNVVYNNSYHGIIASRRCN
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mRNA from alignment at H-elongata_contig87451:915..2346+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig87451.16279.1 ID=mRNA_H-elongata_contig87451.16279.1|Name=mRNA_H-elongata_contig87451.16279.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1432bp|location=Sequence derived from alignment at H-elongata_contig87451:915..2346+ (Himanthalia elongata Himel1 dioecious)
ATGGTCGTGTCGCAATCAACCAATCAGGTAATCTCGTGGGACAACTCTAC CAGTGGCCCGGACGTGAATGAGACTGATGGGCGGTCGTACATCAGCGCCG TCTCGGAGGTGATCGTGAACGCCAGCGAGACCTGCGACGGCAGAGCCAAG TCCGATATGGGCGAGGCGCGAATGGACATCGAGGACAGCGAGATGGGCTA CCTCGGCTACTATGCCAGCAAGAGCTACGGCCTAACATGGAAGGTGCGCG GCGCAAGCCACTGTAATTATCGACCGCGGGGCTCCGAGTAGGGAAAGTTT AAGCTCGCAATAATGTTTCGGTACTATATTACATTATTTTGTTCGTAGCG GTGGACCCCGCCTGTTTTTCTCGTTGTTGTTTGATTTTCCTCACGAAAAA GTGATTTCTTCACCACCAATACTACACTGAGTCCTATTTTAACCATCATA TTTATGCAGAAGGAATGGGCACACGAGTCGGCACCTGCTCTAGTGTACAG CTGTGCTTTTAATCCCCTAGTTTACTATTTAATAGGTTGTTTGGGTTGAC CCCACCCCCCCAAGTCTAATGTCCGCTTCTGATCTCGCTTTTGACGAGAA ACGCTCACGATAATACGAAATCAAAACACTAAAATTGGCCCCCGTATCCG CGTCTCATCTCGTGTCATCAGGTCCGAGGATTCTGCTTGAATAAGACTAA CACCGAGGTAAAAAGAAAAGCACACGATTGAGTGGAATATTATTTTGACC AGACATGCCCTTATACCAGCAGAAAGGGAGAATGGCTGGCTTCTATGTAG GCAGAAGGTACATTTCGGAGAATTGGAAAGGGTAAGGGAGGCGACGGCGA TTGGAGACACGTCGTGCGCAGAGAAATACAATCATAATCTGAAAGCGCGA AGCTCGAGTACGGTTATACGAAACGCCCGTCCTTGTAGCCCTACCTGTTT ACGTCAGACACCGCATGGAGCATATATATCTCGGAACTTGTTGACTATTC TTAGTATCATGGATCCACTCCGTGCCGCGGTTTGCCCTCTCTGTCTGTTT TATTTTTCATCTTCTCTTCACCACGCGCGAAAAAATGCTTTAAAATACAC TGACCTATCCACCTAACCCCACCTTTTTCGAATTGTTCAGCTTCACAGGT TTTCCCCTCTCTCTTTATTATATATGTATGTATATATGCATCTTTGAATA GATCTTCGATGAGGTGGACGTGTACGGCAACATCTACAACAGTGACATCC ACCACAACCACTTCGGAATATACACGTACGGCCACCAGCAAGGAGACTGG AGGAACAGCACAATGCGTGACAACACGGGCTACGGCTTCGACCCGCACGA CGATAGCGACTACATCACCATCCACGATAATGTCGTCTACAACAACAGCT ACCACGGAATTATTGCGTCCAGGCGCTGCAAC
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Coding sequence (CDS) from alignment at H-elongata_contig87451:915..2346+

>mRNA_H-elongata_contig87451.16279.1 ID=mRNA_H-elongata_contig87451.16279.1|Name=mRNA_H-elongata_contig87451.16279.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig87451:915..2346+ (Himanthalia elongata Himel1 dioecious)
ATGGTCGTGTCGCAATCAACCAATCAGGTAATCTCGTGGGACAACTCTAC
CAGTGGCCCGGACGTGAATGAGACTGATGGGCGGTCGTACATCAGCGCCG
TCTCGGAGGTGATCGTGAACGCCAGCGAGACCTGCGACGGCAGAGCCAAG
TCCGATATGGGCGAGGCGCGAATGGACATCGAGGACAGCGAGATGGGCTA
CCTCGGCTACTATGCCAGCAAGAGCTACGGCCTAACATGGAAGATGGTCG
TGTCGCAATCAACCAATCAGGTAATCTCGTGGGACAACTCTACCAGTGGC
CCGGACGTGAATGAGACTGATGGGCGGTCGTACATCAGCGCCGTCTCGGA
GGTGATCGTGAACGCCAGCGAGACCTGCGACGGCAGAGCCAAGTCCGATA
TGGGCGAGGCGCGAATGGACATCGAGGACAGCGAGATGGGCTACCTCGGC
TACTATGCCAGCAAGAGCTACGGCCTAACATGGAAGGTCCGAGGATTCTG
CTTGAATAAGACTAACACCGAGGTCCGAGGATTCTGCTTGAATAAGACTA
ACACCGAGATCTTCGATGAGGTGGACGTGTACGGCAACATCTACAACAGT
GACATCCACCACAACCACTTCGGAATATACACGTACGGCCACCAGCAAGG
AGACTGGAGGAACAGCACAATGCGTGACAACACGGGCTACGGCTTCGACC
CGCACGACGATAGCGACTACATCACCATCCACGATAATGTCGTCTACAAC
AACAGCTACCACGGAATTATTGCGTCCAGGCGCTGCAACATCTTCGATGA
GGTGGACGTGTACGGCAACATCTACAACAGTGACATCCACCACAACCACT
TCGGAATATACACGTACGGCCACCAGCAAGGAGACTGGAGGAACAGCACA
ATGCGTGACAACACGGGCTACGGCTTCGACCCGCACGACGATAGCGACTA
CATCACCATCCACGATAATGTCGTCTACAACAACAGCTACCACGGAATTA
TTGCGTCCAGGCGCTGCAAC
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