mRNA_H-elongata_contig8740.16276.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE) HSP 1 Score: 1781 bits (4614), Expect = 0.000e+0 Identity = 1155/2077 (55.61%), Postives = 1329/2077 (63.99%), Query Frame = 1
Query: 19 KILWVFAVASPDGRAFLQLFLDLDTLVFCLRGSFIRGEIRFSTPTHLVCGGSLAWHHVVLTHAKPKSRLLANRDKISLWVDGEFVDTIK-----------------------AFLDTSVGATIAPLWHLGPCLLLTEVVDIAPAMFALGPEYTGNWSAENPLAAVSSANATRVLRHLQTLGGAAGFEAIGGDVPHALVRRGLRELDRSFNVTERAYYLRRADWAGMTESFYVLLAPEQINFAYNTRHMERPGGPPAAAAAGGVGRFQIPTDSGGRGRDSTVGRRDGESGSSLDAVDDSCWPSQVPATAKRAAISSSLVSGWLFNASRETAPPSVGPGPVACAYGSGVGVTPSGLPRELSGVGGPATLFPLLQRAQTEAALCWTLRLIRGVVRGGGMPSLAYMQTGGGYIILAGLLRSRRALLGREAMRVCFEMAVDRPPDGGAPVDGRRVEREAASDA---------------GAGRDDQPWHGADKGFVD-PEVLKADERRACAWEWERDLVFPPHEEIDALLRTTGAAGECVAAATETTKADAPEWYGEGGRC----CPFVLLTDPYALKHLVMNHQVWGLEDRELMLDMLQMVHSLVSPHNSKSNCRFNARVLHRIGVFRTGLHFLLEASEPLPPPPTTSSRVPAAS------------------------LAVAGLTAITPKSPFSRRHAVAIAAFGGRPRPTAAVAAAGLDTRDAFMASCALLLQRVMATCAIQRDFDRVVGATLSTLADGDVA-VRETRSSGSEPAFSPAKAALRRAGLLGSED-----SSAVDRVLSGQAIVRLYLLRMLLEVVSRPVALASQGEMNAAEGLYVAGVGSPCAREAQRVLE-------ASWPGRGREAADSVGSSDCRVKTRLERWVGGLPPVVDVAE-DGSGLPSPLYIGRQKVLGAVCSRALRPDWFISLLETCREEAGMAWTFRLLAAMLQASEEFVSTFQEAGGYGAMAACLPRHSVSLPVLLPALALALGVPVAALPATAEGMDAVSILSLLRRNAGTV----QFSNGRKAGSGGGGWGSRAYVRVCVARVILPSLRDNIVLIRRAEASGSVTLQARSPXXXXXRTSARPGLGNENDLSSGESSPKASKGVSGSRPVAGPGETVVIACEWQRAKRVNAVISAALWEALMNDPSFRFTCRSPGVVAALVDVLGGTWDEPEEVL------DVAGGEELESQESGSKCGGGGRTLTSGESN---GVPLLASPHPPAEILRIVIADIVAYGGAEVFPSLLRVFASGAAVMGPMLNHSS-----AAGPGSPDSTTRARDLSPLGREVGSASAGIFQRAMLRHLEACSRDAIALALGVGAGGGHLPAQYWRTR------KPSSTATNAAXXXXXXXXXXXXXXXXXXXXXXXLPGVETGHLAAGLVLSVLRQISTVSAEDLGGSADGVKAAARGACQIATVVALRRTVHRESG-----GGSSRISAAGGGRNSAGRGMVDSLMNKSTGGVVLDAEKRRLTVNEDGSDLLQECLLMIAHNFDTLLGGERRSSPATGGGFTGLSAGGPPAPSLRSRPSPLSTKSPIRSQFRSPVPSSRTPSDGKAGRDGY-----AAGVPSPLDLYNVGQDHTMNTPLTVGGLFADTPQPRKWTSRFNFPDDVIAGAGTASAAAAAVDEATRLNLTFSALELNNIGGGGGVSS------------RRLPLSTPGYSGTPSS---ANDSPSSAKSLWESAAAGAAGFVAAADRGGKGGNTGGSXXVGNDFSSXXXXXXXXXXXXXXXXXXXXXASASHGMRESLVSRLRGSA-ERAFVAGFVAELRGLLLSDSDRVRKLATRLAGALLSRRRAAVQELLGEEII-TGFSMLDH------------LSFDPAPEDEITDTTCAQALSLWLTDIGQEAALREGFGRASDRANALIPHVSSAEGLMAALTRADLVAANGSG---NVGGG-GYSTLSRLGSGMGGALGALG-GPNRRIITVDRSIQRADMIARTYERVATSHGRWVWSGADDLAWASKCWRIQLNGLRGKISLWEGGLFGRLMRSPEAIVALGPGAEGVGGGLEEVRHE 5802
++LWVF VASPDGRAFLQLFLDLD LVFC RGS I+GE+RF TP HL CGG+ WHHV+L H++ KSRLLA +DK+ LWVDGE VDT+K AFLD SVGAT+AP+WHLGPC L+TE VD+AP MFALGPEYTG W+AE+PL A+SSANA LR LQ LGGAAGF A+GGDVPHAL RRGLRELDR FNVTERAYY R+D AG+T+SFY+LLAPE + FAYNTRHMERPGGP A AA + G LDA D PSQVPA+AKRAA S+SLVSGWLFNA+RETA PS GPGPV CAYG + V PS LPREL+GVGGPA LFPLLQRAQTEAALCWTLRLI VVRGGG S+ YMQ GGGY+ILAGLLRSRRALLG + +R CFEMAVDR +GG G+ E DA G G +D PW G D G D P D A W WE D+ F P +E+ AL R G E + G+ G PFVLLT+PYALK +V+NHQ+WGLEDR LMLD+LQ+VHSLVSPHNSK CRFNARVLHR+G+FR GLH+LLEASEP P TT +AS + A P + A+ IA FGG RPTAA+AAAGLDTRD FM SC LLLQRV+A C IQRDFDRVVGATLSTLADGD RE+R +GSEP+F+PA+A LRR GLLG E+ SS D+VLSGQA+VRLYL+RMLLE+V+ PVA AS+GE+++ EG+YV GVGSPCAREAQR E S +E + GS TRLERWV G+PPVVDV E DGSGLPSPLY GR + VCSRALR DWFISLLETC+EEAG+AWTFRLLAAMLQ+SEEF S+F++A G+ AMA CLPR++ SLPVLLPALALALGVPVAALPATAEGMDA+SILSLLRRNAGT + + G A GGG R +VRVC+ARVILP LR N L+RRAEA+G V A +P XXX + +W+RAKRVN ++SAA+WEALMNDPSFR TCRSPG+VAALVDVLGGTWDEPEE L A GE TSG S+ G P ASPH PAE+LRIVIADI+A G + VF S+ RVF SGAAVMGPML S AA +P S RDLSPLGRE GSASAGIFQRA+LRHLE CSR+AI LA R R KP A N A XXXXXXXXXXXXXX A GAC + T+VALRR + RESG GG +R GGG AGR +V+S G + D DLL+E LLMI HNFD LLG ERRSS G G G S GGPP P P+P S +SP+ + RSP S+ T G DG A VPSPLDL + Q+ + + PLT G+FADTP PRKW+SRF+FP D A G A+AAA AV+EA RL +TFSALEL +IG ++ + L L++ G+P+ SP + SLWESAA GAAG VAAADRG K XXXXXXXXXXXXXXXXXXXXX G+ ESLV RLRG+A +RAFVAGFVAELR LLLSDS+ VRKL+TRLAG LL+RRRA +QELLGEE++ TGFSML+H + T AQA +LWLT GQE A++EGF RA++R+ L+PHVSS EGL AAL+RA+L AANG G + G G G S LSRLGSG+GGALGAL GPNR+ ITVDR+IQRADMIARTYERVATSHGRWVW+GADDLAWAS+ WR+QL+GLRGK+SLWEGGLFGRLM SPEAI AL PG EG G++ R++
Sbjct: 1921 RVLWVFVVASPDGRAFLQLFLDLDLLVFCARGSSIQGELRFRTPEHLSCGGARVWHHVLLAHSRAKSRLLATKDKLHLWVDGELVDTVKVESTSFTTPEGPPCAYLGCPHPQAFLDASVGATVAPVWHLGPCALVTEFVDVAPLMFALGPEYTGVWTAESPLEAISSANAAGTLRRLQALGGAAGFGALGGDVPHALQRRGLRELDRCFNVTERAYYWHRSDRAGVTDSFYLLLAPELVTFAYNTRHMERPGGPTPADAAXXXXXXXXXXXXXXXXXXXXXXXXXDDDGIDLDA-DALDRPSQVPASAKRAATSASLVSGWLFNAARETAMPSAGPGPVGCAYGDDIAVAPSSLPRELAGVGGPAVLFPLLQRAQTEAALCWTLRLIARVVRGGGPSSVGYMQVGGGYLILAGLLRSRRALLGSDTVRACFEMAVDRAYNGGGEDGGKAGSEEXXXDAVDGXXXXXXXXXXXSGNGNEDLPWGGTDTGLGDDPSKAVEDSHMANGWGWEEDMAFMPRDEMSALFRQAGMEEE-----------EGGHKAGQEGAARRSLSPFVLLTEPYALKLVVLNHQIWGLEDRGLMLDVLQLVHSLVSPHNSKPYCRFNARVLHRLGIFRAGLHYLLEASEP---PATTPLPSSSASDXXXXXXXXXXXXXXXXXXXXXXXXXXXNVKASPLGRPSTAPAALPIAGFGGVRRPTAALAAAGLDTRDGFMVSCTLLLQRVLAMCTIQRDFDRVVGATLSTLADGDATGARESRPAGSEPSFAPAEAVLRRIGLLGDEEDGGGGSSPADKVLSGQALVRLYLVRMLLEIVTLPVAAASKGELSSTEGVYVGGVGSPCAREAQRAAEEAAAASAVSGAKTPKEGGEKGGSG-----TRLERWVDGVPPVVDVVEADGSGLPSPLYAGRHRQFKTVCSRALRADWFISLLETCQEEAGVAWTFRLLAAMLQSSEEFGSSFRDADGFRAMAVCLPRYAASLPVLLPALALALGVPVAALPATAEGMDAISILSLLRRNAGTAHGPGRCAGGGMAPRGGGDTEPRPFVRVCLARVILPCLRVNAALLRRAEAAGVVPTTAAAPPSXXXXXXXXXXXXXXXXXXXXXAD----------------------VSDWRRAKRVNELMSAAMWEALMNDPSFRLTCRSPGIVAALVDVLGGTWDEPEEGLLGGSKGTAATGEAEXXXXXXXXXXXXXXXTTSGGSSSTEGFPPQASPHSPAELLRIVIADIIATGSSVVFRSVFRVFTSGAAVMGPMLKGPSPRGEDAAVEAAPSSRRMPRDLSPLGREAGSASAGIFQRAILRHLETCSREAINLAAAXXXXXXXXX-XXXRNRAGKSPPKPRVVALNRAVGSVAAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT---ALGACHVTTIVALRRAIQRESGREGWLGGRAR--GDGGGSAKAGRDLVESWSKGGAG-----------AAHGDDGDLLEESLLMIEHNFDALLGEERRSS-TPGPGMGGTSVGGPPFPP----PAPTS-RSPVNPKPRSPQSSASTTPRGGPESDGXXXXGRCAKVPSPLDLSGLDQEASADAPLTTAGVFADTPAPRKWSSRFDFPLDNTA-TGAATAAAVAVEEANRLAMTFSALELASIGSSDRSTTDGSXXXXXXQGPKSLQLTSGSLIGSPAGIGGGGGSPKAGNSLWESAAKGAAGLVAAADRGSK-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVAESLVYRLRGAASDRAFVAGFVAELRALLLSDSESVRKLSTRLAGTLLARRRATMQELLGEELLSTGFSMLEHPXXXXXXXXXXXXXXXXXXXXAAAEGTRAQAFALWLTGGGQEVAMKEGFERATERSYTLVPHVSSVEGLTAALSRAEL-AANGGGYGYSAGAGPGSSALSRLGSGVGGALGALAAGPNRKTITVDRAIQRADMIARTYERVATSHGRWVWTGADDLAWASRTWRVQLSGLRGKVSLWEGGLFGRLMCSPEAIAALRPGTEGGQDGVDGERYK 3919
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI) HSP 1 Score: 1376 bits (3562), Expect = 0.000e+0 Identity = 937/1816 (51.60%), Postives = 1075/1816 (59.20%), Query Frame = 1
Query: 22 ILWVFAVASPDGRAFLQLFLDLDTLVFCLRGSFIRGEIRFSTPTHLVCGGSLAWHHVVLTHAKPKSRLLANRDKISLWVDGEFVDTIKAFLDTSVGATIAPLWHLGPCLLLTEVVDIAPAMFALGPEYTGNWSAENPLAAVSSANATRVLRHLQTLGGAAGFEAIGGDVPHALVRRGLRELDRSFNVTERAYYLRRADWAGMTESFYVLLAPEQINFAYNTRHMERPGGPPAAAAAGGVGRFQIPTDSGGRGRDSTVGRRDGESGSSLD--AVDDSCWPSQVPATAKRAAISSSLVSGWLFNASRETAPPSVGPGPVACAYGSGVGVTPSGLPRELSGVGGPATLFPLLQRAQTEAALCWTLRLIRGVVRGGGMPSLAYMQTGGGYIILAGLLRSRRALLGREAMRVCFEMAVDRPPDGGAPVDGRRVEREAASD---------------AGAGRDDQPWHGADKGFVD-PEVLKADERRACAWEWERDLVFPPHEEIDALLRTTGAAGECVAAATETTKADAPEWYGEGGRCCPFVLLTDPYALKHLVMNHQVWGLEDRELMLDMLQMVHSLVSPHNSKSNCRFNARVLHRIGVFRTGLHFLLEASEPLPPPPTTSSRVPAASLAVAGLTAITPKSPFSRRHAVAIAAFGGRPRPTAAVAAAGLDTRDAFMASCALLLQRVMATCAIQRDFDRVVGATLSTLADGDVA-VRETRSSGSEPAFSPAKAALRRAGLLGSED---------SSAVDRVLSGQAIVRLYLLRMLLEVVSRPVALASQGEMNAAEGLYVAGVGSPCAREAQRVLE------------ASWPGRGREAADSVGSSDCRVKTRLERWVGGLPPVVDVAE-DGSGLPSPLYIGRQKVLGAVCSRALRPDWFISLLETCREEAGMAWTFRLLAAMLQASEEFVSTFQEAGGYGAMAACLPRHSVSLPVLLPALALALGVPVAALPATAEGMDAVSILSLLRRNAGTV----QFSNGRKAGSGGGGWGSRAYVRVCVARVILPSLRDNIVLIRRAEASGSVTLQARSPXXXXXRTSARPGLGNENDLSSGESSPKASKGVSGSRPVAGPGETVVIACEWQRAKRVNAVISAALWEALMNDPSFRFTCRSPGVVAALVDVLGGTWDEPEEVL------DVAGGEELESQESGSKCGGGGRTLTSGESN--GVPLLASPHPPAEILRIVIADIVAYGGAEVFPSLLRVFASGAAVMGPMLNHSS-----AAGPGSPDSTTRARDLSPLGREVGSASAGIFQRAMLRHLEACSRDAIALALGVGAGGGHLPAQYWRT--RKPSSTATNAAXXXXXXXXXXXXXXXXXXXXXXXLPGVETGHLAAGLVLSVLRQISTVSAEDLGGSADGVKAAARGACQIATVVALRRTVHRESG-----GGSSRISAAGGGRNSAGRGMVDSLMNKSTGGVVLDAEKRRLTVNEDGSDLLQECLLMIAHNFDTLLGGERRSSPATGGGFTGLSAGGPPAPSLRSRPSPLSTKSPIRSQFRSPVPS-SRTPSDG-KAGRDGYAAGVPSPLDLYNVGQDHTMNTPLTVGGLFADTPQPRKWTSRFNFPDDVIAGAGTASAAAAAVDEATRLNLTFSALELNNIG-------GGG------GVSSRRLPLSTPGYSGTPSSAND---SPSSAKSLWESAAAGAAGFVAAADRGGKGGNTGGSXXVGNDFSSXXXXXXXXXXXXXXXXXXXXXASASHGMRESLVSRLRGSA-ERAFVAGFVAELRGLLLSDSDRVRKLATRLAGALLSRRRAAVQELLGEEII-TGFSMLD 5214
+LWVF VASPDGRAFLQLFLDLD LVFC RGS IRGEIRF+TP HL CGG+ WHHV+L H++ KSRLL +DK+ LWVDGE DT+KAFLD SVGAT+AP+WHLGPC L+TE VD+AP MFALGPEYTG W+AE+PL A+SSANA LR LQ LGGAAGF A+GGDVPHAL RR LRELDR FNVTERAYY R+D AG+T+SFY+LLAPE + FAYNTRHMERPGGP G LD A+D PSQVPA+AKRAA S+SLVSGWLFNA+RETA PS GPGPV CAYG + V PS LPREL+G GGPA LFPLLQRAQTEAALCWTLRLI VVRGGG S+ YMQ GGGY++LAGLLRSRR LLG +R CFEMAVDR GG +G +D PW G D G D P D RA W WE D+ F P +EI WGLEDR LMLD+LQ+VHSLVSPHNSK RV+A C IQRDFDRVVGATLSTLADGD RE+R +GSEP+F+PA+A LRR GLLG E SS D+VLSGQA+VRLYL+RMLLE+V+ PVA AS+GE+++ EG+YV GVGSPCAREAQR S +E A G TRLERWV G+PPVVDV E DGSGLPSPLY GR + VCSRALR DWFISLLETC+EEAG+AWTFRLLAAMLQ+SEEF S+F+EA G+ AMA CLPR++ SLPVLLPALALALGVPVAALPATAEGMD +SILSLLRRNAGT + + G A GGG R +VRVC+ARVILP LR N L+RRAEA+G V A + + P SG+ + K S GV A +W+RAKRVN ++SAA+WEALMNDPSFR TCRSPG+VAALVDVLGGTWDEPE L A G +E G T + G S+ G P ASPHPPA++LRIVIADI+A G A VF S+LRVF+SGAAVMGPML S AA +P ST RDLSPLGRE GSASAGIFQRA+LRHLE CSR+AI LA + P + A XXXXXXXXXXX A GAC + T+VALRR + RESG GG +R GGG AGR +V+S S GGV LL+E LLMIAHNFD LLG ERRSS G S G PP P P+P+S KSP+ + RSP S S TP G ++G G A VPSPLDL+ + Q+ + PLT G+FADTP P+KW+SRF+FP D A G A+AAA AV+EA RL +TFSALEL++IG GG G + L L++ G+P+ SP ++ SLWESAA GAAG VAAADRG SXX XXXXXXXXXXXXXXXXXXXXX A G+ ESLV RLRG+A +RAFVAGFVAELR LLLSDS+ VRKL+TRLAG LL+RRRA +QELLGEE++ TGFSML+
Sbjct: 1817 VLWVFVVASPDGRAFLQLFLDLDLLVFCARGSSIRGEIRFNTPEHLSCGGARVWHHVLLAHSRAKSRLLGTKDKLHLWVDGELADTVKAFLDASVGATVAPVWHLGPCALVTEFVDVAPLMFALGPEYTGVWTAESPLEAISSANAAGALRRLQALGGAAGFGALGGDVPHALHRRVLRELDRCFNVTERAYYWNRSDRAGVTDSFYLLLAPELVTFAYNTRHMERPGGPTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGIDLDGDALD---RPSQVPASAKRAATSASLVSGWLFNAARETATPSAGPGPVGCAYGDDIAVAPSSLPRELAGAGGPAVLFPLLQRAQTEAALCWTLRLIPRVVRGGGASSVGYMQIGGGYLVLAGLLRSRRTLLGPHTVRACFEMAVDRAYTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTSNEDLPWGGTDTGLGDDPSKAVEDSHRADGWGWEEDIAFMPRDEI--------------------------------------------------------WGLEDRGLMLDVLQLVHSLVSPHNSK----------------------------------------------------------------------------------------------------RVLAMCTIQRDFDRVVGATLSTLADGDATGARESRPAGSEPSFAPAEAVLRRVGLLGEEXXXXXXXXXXSSPADKVLSGQALVRLYLVRMLLEIVTLPVAAASKGELSSTEGVYVGGVGSPCAREAQRAAXXXXXXXXXXXXXVSGAKAPKEGARKGGGG-----TRLERWVDGVPPVVDVVEADGSGLPSPLYAGRHRQFKTVCSRALRADWFISLLETCQEEAGVAWTFRLLAAMLQSSEEFGSSFREADGFRAMAVCLPRYAASLPVLLPALALALGVPVAALPATAEGMDVISILSLLRRNAGTAHGPGRCAGGGMAPRGGGDTEPRPFVRVCLARVILPCLRVNAALLRRAEAAGVVPTTAAAAESSPSQAPPSP---------SGDGAEKTSPGV------AATASATADVSDWRRAKRVNELMSAAMWEALMNDPSFRLTCRSPGIVAALVDVLGGTWDEPEGGLLGGSKGTAATGGAGREEEVGXXXXXXXXTTSGGSSSTEGFPPQASPHPPAKLLRIVIADIIAVGSAVVFRSVLRVFSSGAAVMGPMLKGPSPRGEDAAVEAAPSSTRMPRDLSPLGREAGSASAGIFQRAILRHLETCSREAINLAAAXXXXXXXXXXXRRNRAGKSPPNPRVVALNRAVGSVAAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALGACHVTTIVALRRAIQRESGREGWLGGRAR--GDGGGSAKAGRDLVESW---SKGGV---GXXXXXXXXXXXXXLLEESLLMIAHNFDALLGEERRSSTPGPGVAGTASVGSPPFPP----PAPIS-KSPVNPKPRSPQSSASTTPRGGLESGGGGRRANVPSPLDLFGLDQEASAEAPLTTAGVFADTPAPQKWSSRFDFPLDNTA-TGAATAAAVAVEEANRLAMTFSALELSSIGSSDRSTTGGSXXXXXRGQGPKSLQLASGSLIGSPAGVGXXXXSPKASNSLWESAAKGAAGLVAAADRG--------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--GVAESLVYRLRGAASDRAFVAGFVAELRALLLSDSESVRKLSTRLAGTLLARRRATMQELLGEELLSTGFSMLE 3429
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: D8LI41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI41_ECTSI) HSP 1 Score: 237 bits (604), Expect = 3.240e-59 Identity = 130/187 (69.52%), Postives = 151/187 (80.75%), Query Frame = 1
Query: 5260 TCAQALSLWLTDIGQEAALREGFGRASDRANALIPHVSSAEGLMAALTRADLVAANGSGN-----VGGGGYSTLSRLGSGMGGALGALG-GPNRRIITVDRSIQRADMIARTYERVATSHGRWVWSGADDLAWASKCWRIQLNGLRGKISLWEGGLFGRLMRSPEAIVALGPGAEGVGGGLEEVRHE 5802
T AQA +LWLT GQE A++EGF RA++R+ LIPHVSS EGL AAL+RA+L AANG G G G S LSRLGSG+GGALGAL GPNR+ ITVDR+IQRADMIARTYERVATSHGRWVW+GADDLAWAS+ WR+QL+GLRGK+SLWEGGLFGRLM SPEAI AL PG +G G++ R++
Sbjct: 40 TRAQAFALWLTGGGQEVAMKEGFERATERSYTLIPHVSSVEGLTAALSRAEL-AANGGGYGYGAAASGPGSSALSRLGSGVGGALGALAAGPNRKTITVDRAIQRADMIARTYERVATSHGRWVWTGADDLAWASRRWRVQLSGLRGKVSLWEGGLFGRLMCSPEAITALRPGTDGGQDGVDGERYK 225
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: W7TSW7_9STRA (Wd repeat and fyve domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSW7_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.400e-27 Identity = 165/638 (25.86%), Postives = 268/638 (42.01%), Query Frame = 1
Query: 976 YGSGVGVTPSGLPRELSGVGGPATLFPLLQRAQTEAALCWTLRLIRGVVRGGGMPSLAYMQTGGGYIILAGLLRSRRALLGREAMRVCFEMAVDRPPDGGAPVDGRRVEREAASDAGAGRDDQPWHGADKGFVDPEVLKADERRACAWEWERDLVFPPHEEIDALLRTTGAAGECVAAATETTKADAPEWYGEGGRCCPFVLLTDPYALKHLVMNHQVWGL-EDRELMLDMLQMVHSLVSPHNSKSNCRFNARVLHRIGVFRTGLHFLLEASEPLPPPPTTSSRVPAASLAVAGLTAITPKSPFSRRHAVAIAAFGGRPRPTAAVAAAGLDTRDAFMASCALLLQRVMATCAIQRDFDRVVGATLSTLAD-----GDVA-----VRETRSSGSEPAFSPAKAALRRAGL-LGSEDSSAVDRVLSGQAIVRLYLLRMLLEVVSRPVALASQGEMNAAEGLYVAGVGSPCAREAQRVLEASWPGRGREA--ADSVGSSDCRVKTRLERWVGGLPPVVDVAEDGSGLPSPLYIGRQKVLGAVCSRALRPDWFISLLETCREEAGMAWTFRLLAAMLQASEEFVSTFQEAG-GYGAMAACLPRHSVSLPVLLPALALALGVPVAALPATAEGMDAVSILSLL 2844
+G G + P + + G+ GP LFPLL+ A + ALC L L+R RG +L YMQ G Y ++ LL ++ L + +R C +AVD + E E+AS+ G E L AL + T + + + T+ +P C +L D ALKHLV+N ++WG +D E+++ +L +H L+SP N N FNA LH +G+ R L +++A V +S+ G + P+ + H A + D + C LL++++ T + D + + LST+A GD+ + + S+ +F PA + + L GS+D VLS Q+IVR+YLL +L++V++R Q +G+ V V + E +R G G A + +S+ R V G P + + L+ + SR + PDWF ++L +CR+ ++ T R L + Q ++FV F E G+ + + LP S S VL+P LA+ LGVP+ LP+ ++ + + LL
Sbjct: 1575 FGDGALMNPLSISDSIFGIAGPQVLFPLLEVADSCMALCVVLELVRVFCRGHA-ANLEYMQETG-YRVMVFLLARKKDLFTPDVLRACLALAVD------TNATAKNTEGESASEEG------------------EPL-----------------------APALAQRTPYSSDKRDNSPHTSLNPSPH--------CMSGVLVDAAALKHLVLNWELWGSNQDHEIVIALLAELHGLLSPENP--NAVFNAYRLHYLGLVRWTLSVMMQA-------------VKLSSVGQEGGW-VLPRITYEDAH----------------WAQTSVALPDKLLMLCGNLLEQLLLTRMAENDVNDIASVLLSTVAQPSSSRGDLGETIEGITGSNSTNGSMSFRPAAQVVNISALKFGSKD------VLSAQSIVRIYLLNILIKVLAREHESRHQTRTTGGQGV-VRKVMDFFSLETERKTGKIGVGGGISGNLAPAAAASNASTFQRGGS-VTGRGPNASATQVKN-----LFREDDHEISKALSRCMSPDWFHAVLASCRDALSISLTLRALFILFQERDDFVVAFSEYDTGFVTLGSFLPSISASPVVLMPLLAVILGVPMVQLPSLTN-LEEIHLYELL 2109
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: A0A7S2Y6C9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6C9_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.540e-18 Identity = 113/410 (27.56%), Postives = 172/410 (41.95%), Query Frame = 1
Query: 1579 LLTDPYALKHLVMNHQVWGLEDR--ELMLDMLQMVHSLVSPHNSKSNCRFNARVLHRIGVFRTGLHFLLEASEPLPPPPTTSSRVPAASLAVAGLTAITPKSPFSRRHAVAIAAFGGRPRPTAAVAAAGLDTRDAFMASCALLLQRVMATCAIQRDFDRVVGATLSTLA-----DGDVAVRETRSSGSEPAFSPAKAALRRAGLLGSEDSSAVDRVLSGQAIVRLYLLRMLLEVVSRPVALASQGEMNAAEGLYVAGVGSPCAREAQRVLEASWPGRGREAADSVGSSDCRVKTRLERWVGGLPPVVDVAEDGSGLPSPLYIGRQKVLGAVCSRALRPDWFISLLETCREEAGMAWTFRLLAAMLQASEEFVSTFQEAGGYGAMAACLPRHSVSLPVLLPALALALGVPV 2787
+LTD A+KH+++NHQVW L L L +L +++ LV H S FNAR LH +G+ R GLH +LEASE L G A+ + + P + + G D + F+ +C LL+RV+ D + + A + T++ +G+ ++R EP PA + RLYL+R+L E++ +G+ + A EA +G A +V V + + ++ P + A+ GL P +I Q L A L P WF +LLE CREEA + RL+ MLQAS F STF+E G +G +PR S +++ L+ GVP+
Sbjct: 218 VLTDLEAMKHILLNHQVWDLRKYGPALPLRLLNVLNRLVD-HKSLHKA-FNARRLHMVGIVRWGLHLMLEASE----------------LYGNGEHAVKAGENTADAEGARASNAWVCEAPLVSDVSVGGDPGNPFLQACKNLLRRVLTFMLTPGDLESLSEALIYTVSTPPGQNGNSSIRAMSEHEGEPRMLPA-------------------------STTRLYLVRLLEELI--------------VDGVNEIVAAASTAHEA----------KGGMAEHTVQPHAGGVASPNQPYLA--TPALQ-AKTADGLFHPKHIQAQAFLSAFAG-FLNPIWFATLLEGCREEASASAVIRLMVLMLQASSTFESTFRETGEFGPFIMSIPRFSTCASIIISLLSHHFGVPI 556
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: A0A7S1CSU6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CSU6_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.640e-8 Identity = 108/449 (24.05%), Postives = 175/449 (38.98%), Query Frame = 1
Query: 25 LWVFAVASP----------------DGRAFLQLFLDLDTLVFC-LRGSFIRGEIRFSTPTHLVCGGSLAWHHVVLTHAKPKSRLLANRDKISLWVDGEFVDT---IKAF-----------------LDTSVGATIAPLWHLGPCLLLTEVVDI--APAMFALGPEYTGNWSAENPLAAVSSANATRVLRHLQTLGGAAGFEAIGGDVPHALVRRGLRELDRSFNVTERAYYLRRADWAGMTESFYVLLAPEQINFAYNTRHMERPGGPPAAAAAGGVGRFQIPTDSGGRGRDSTVGRRDGESGSSLDAVDDSCWPSQVPATAKRAAISSSLVSGWLFNASRETAPPSVGPGPVACAYGSGVGVTPSGLPRELSGVGGPATLFPLLQRAQTEAALCWTLRLIRGVVRGGGMPSLAYMQTGGGYIILAGLLRSRRALLGREAMRVCFEMAV 1254
L+VF ++SP G F + D+ FC L S RG+ + L G WHHV L++ PK +L + ++L++DG V++ + AF + + PLW LGP LL++ V+ + A AM+ GP++ G + + P +A AT L G G V AL RR + ++ +V +R ++G + PE + + A G + ++ I + G R SS R ++ S ++ N S T A YG ++P+ + +GGP L P++ Q+ ++L +LR+IR VR P+L +Q GGGY +LA LLR +R ++ + CF AV
Sbjct: 79 LFVFDISSPPVKKSTDGSGSFPYGSSGHDFFSFWYDVTNQRFCVLTSSNSRGDPTCFPISPLPAG---VWHHVQLSYQAPKRSMLGRKAVLTLFIDGRPVESEAKVDAFNLPPTARVHIGVPNPVLASSGIVRGNLPLWDLGPALLVSTVLGLRDATAMYTAGPDFPGLFWGDRPQRLSLAAAATAAFVMLAENGEK-------GSVAGALRRRKIPSMEAVGHV------MRERGFSGGP-----IAGPESDSLS----------------AVGLLCKYPI--------ENVVFGFR----ASSXXXXXXXXXXXXXXRHFSRRLVNISRINS---NTSVSTD---------AIVYGYSSIISPNCFAENVQWIGGPNILMPIVNATQSASSLALSLRMIRESVRRH-PPNLEMLQAGGGYRMLALLLRQKR-IMDASVLDQCFAFAV 464
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Match: A0A7S3YM81_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM81_HETAK) HSP 1 Score: 61.6 bits (148), Expect = 1.350e-6 Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 1
Query: 2563 LRPDWFISLLETCREEAGMAWTFRLLAAMLQASEEFVSTFQEAGGYGAMAACLPRHSVSLPVLLPALALALGVP 2784
L P+WF+ +LE +EEA A RLLA MLQ + F F AGG+ A +PRHS P LL LA G P
Sbjct: 128 LTPNWFMCMLEGVQEEASAAVLLRLLAVMLQGTPGFDEAFFAAGGFSLCAMAVPRHSACAPALLTLLAALFGAP 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8740.16276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8740.16276.1 >prot_H-elongata_contig8740.16276.1 ID=prot_H-elongata_contig8740.16276.1|Name=mRNA_H-elongata_contig8740.16276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1934bp PPXXXXKILWVFAVASPDGRAFLQLFLDLDTLVFCLRGSFIRGEIRFSTPback to top mRNA from alignment at H-elongata_contig8740:434..9343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8740.16276.1 ID=mRNA_H-elongata_contig8740.16276.1|Name=mRNA_H-elongata_contig8740.16276.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8910bp|location=Sequence derived from alignment at H-elongata_contig8740:434..9343+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8740:434..9343+ >mRNA_H-elongata_contig8740.16276.1 ID=mRNA_H-elongata_contig8740.16276.1|Name=mRNA_H-elongata_contig8740.16276.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=11604bp|location=Sequence derived from alignment at H-elongata_contig8740:434..9343+ (Himanthalia elongata Himel1 dioecious)back to top |