mRNA_H-elongata_contig87379.16275.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig87379.16275.1
Unique NamemRNA_H-elongata_contig87379.16275.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 4.560e-118
Identity = 185/303 (61.06%), Postives = 219/303 (72.28%), Query Frame = 1
Query:    7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVS---TENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            KNFT+P +RT YE++CI  SELPA +E+H IGFE I+Q STS+YVHHL L A+TGT +CGQDC ++   +  D +  S+ S  S   T N   IP FC   FA I AW PG AD QLP +VGFRFG+ S  YTSL ++THYNN DGD G  DSSGVRVYYT+ +R MDMGV+ LGDP V L G  + EGKSS+ F+CPG+CTE  FE E+VTV+SHFLHMHENGQRM TRQYR +  GNE LV + EVEYYSFLQAGG+V   N    IQKGDRFE  C YDT+LSS+   +V FG GSE EM
Sbjct:  218 KNFTVPTNRTHYENSCIPRSELPA-EEFHAIGFEGIIQTSTSKYVHHLTLTAFTGTHDCGQDCIDWVLANLPDDDEPSSQSAYSDPYTFNNMTIPDFCYQQFANIFAWAPGSADVQLPGNVGFRFGNDS--YTSLRVETHYNNPDGDAGEVDSSGVRVYYTEDIREMDMGVITLGDPSVDLIGTKLPEGKSSVEFDCPGACTETYFEAESVTVYSHFLHMHENGQRMETRQYRNDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQKGDRFETTCYYDTSLSSVDSTNVTFGEGSEQEM 517          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G217_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G217_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 8.560e-112
Identity = 178/337 (52.82%), Postives = 217/337 (64.39%), Query Frame = 1
Query:    7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSY---------------------------------YDTNSSSAPSYVST-ENGG-EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            KNF+IP  RTWYEDTCI+ASELP LDEYHVI FE +LQ  T+EYVHHLVL  + G  +CG  C E+  + +                                 Y ++ SS+ S+    EN    +PSFC    DFA I  W PG ++ +LP+DVGF FG+ SGG+ SL +QTHYNN DG  G  DSSGVRVYYT+ LR + MGVL LGDP V L  + + EGKSS SF CPG+C+E NFE E VT+F+H LHMHENGQRM+T QYR +  GNE L+H+ EV YYSFLQAG +V   N   TI+KGD F   C+YDT+LSS+ P +V FG GSE EM
Sbjct:   31 KNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGNACNEWLDEMFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSFTEYFENLNITVPSFCSNYGDFADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFVALYDQPLPEGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVGYYSFLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVDPANVTFGEGSEQEM 367          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G337_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G337_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 1.240e-111
Identity = 180/335 (53.73%), Postives = 223/335 (66.57%), Query Frame = 1
Query:    7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSY-------------------------------YDTNSSSAPSYVST-ENGG-EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            KNF+IP  RTWYEDTCI+ASELP LDEYHVI FE +LQ  T+EYVHHLVL  + G  +CG  C E+  + +                               Y ++ SS+ S+    EN    +P+FC    + A I  W PG ++ +LP+DVGF FG+ SGG+ SL +QTHYNN DG  G  DSSGVRVYYT+ LR + MG++ LGDP V L  + + EGKSS SF CPGSC+E NFE E VTVF H LHMHENGQRM+TRQYR +  GNEVL+H+AEVEYYS LQAGG++   N  +TI+KGDRF  +C+YDT+LSS+S  +V FGLGSE EM
Sbjct:  187 KNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGHACNEWLDEIFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSFTEYFENLNITVPTFCSNYGEQADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGLMKLGDPFVALYDQPLPEGKSSFSFGCPGSCSETNFEEEEVTVFIHMLHMHENGQRMVTRQYRNDSDGNEVLIHTAEVEYYSVLQAGGHLVTNNETITIRKGDRFTTECMYDTSLSSVSSANVTFGLGSEQEM 521          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 3.100e-108
Identity = 170/302 (56.29%), Postives = 211/302 (69.87%), Query Frame = 1
Query:    7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCD--YDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            KNF+IP  RTWYE+TCI ASELP LDEYH IGFE +LQ+ T+E+VHHLVL  + G  +CG  C E+  + + D  SS + S ++      +P FC+   D A I  W PG+    LP+DVGF FG+ SGG  SL +Q HYNN DG  G  DSSGVRVYYT+ LR M+MG++ LGDP   L  + + +GKS  SF CPG+CTE  FE E VTVFSH LHMHENGQR+ TRQYR +  GNEVL+H+AEVEYYSFLQAG +V   N+  TI+KGD F  +C YDT+ SS+   +V +GLGSE+EM
Sbjct:  210 KNFSIPTVRTWYENTCIPASELPKLDEYHAIGFEGVLQDDTAEFVHHLVLTGFYGPPDCGNACFEWMDEMFGDGGSSYSSSDMTNIT---LPWFCNDLEDAADIFIWAPGMQSLDLPDDVGFLFGNESGGLNSLRVQVHYNNADGVSGKNDSSGVRVYYTEELRPMNMGLVKLGDPQGALHPQPLPDGKSVYSFGCPGTCTETYFEEEEVTVFSHLLHMHENGQRISTRQYRNDGDGNEVLIHTAEVEYYSFLQAGVHVVTVNDSTTIKKGDVFTTECYYDTSYSSVGSPNVTWGLGSENEM 508          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G216_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G216_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 5.450e-105
Identity = 171/332 (51.51%), Postives = 215/332 (64.76%), Query Frame = 1
Query:    7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAE-----FFSDSYYDTNSS-------------SAPSYVSTENGG------------EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            KNF+IP  RTWYE+TCI+ASELP LDEYH I FE +LQ  T+EYVHHL+L  + G  +CG+ C+E     F S+   D++S+             S  SY S ++               +PSFC    + A I  W PG ++ +LP DVGF  G+ SGG+ SL +QTHYNN DG  G  DSSGVRVYYT+ LR + MGVL LGDP + L  + + +GKSS SF CPG+C+E NFE E VT+F+H LHMHENGQRM+T QYR +  GNE L+H+ EV YYS LQAG +V   N   TI+KGD F   C+YDT+LSS+   +V FGLGSE EM
Sbjct:  208 KNFSIPTVRTWYENTCITASELPDLDEYHAIAFEGLLQADTAEYVHHLILTGFYGASDCGKACSEWLDEMFASEDGSDSSSTVEGGXXXXXXXXXSGSSYPSDDSSSVSFTEYFENLNITVPSFCSNYGEQADIFVWAPGTSNLELPGDVGFLLGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFIALSDQPLPDGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVWYYSSLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVGSANVTFGLGSEQEM 539          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A6H5K5A3_9PHAE (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A3_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 6.810e-65
Identity = 117/208 (56.25%), Postives = 136/208 (65.38%), Query Frame = 1
Query:  358 VGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTI-------------------------QKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            VGFRFG+ S  YTSL ++TH NN DGD G  DSS VRVYYT+ +R MDMGV+ LGDP V L G  + EGKSS+ F+CPG CTE   E E+VTV+SHFLHMH NGQRM TRQYR +  GNE LV + EVEYYSFLQAGG+V  A+NG  I                         QKGD FE  C YDT+LSS+   +V FG GSE+ M
Sbjct:   19 VGFRFGNDS--YTSLRVETHNNNPDGDAGEVDSSSVRVYYTEGIREMDMGVITLGDPNVDLTGTKLPEGKSSVEFDCPGVCTETYLEAESVTVYSHFLHMHGNGQRMETRQYRSDSDGNEQLVDATEVEYYSFLQAGGHV-TAHNGSDIIQYIHYLLPPNAFVLPCLAFVSVFLQKGDSFETTCYYDTSLSSVDSTNVTFGEGSEEGM 223          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7FP36_ECTSI (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP36_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 4.510e-52
Identity = 84/135 (62.22%), Postives = 105/135 (77.78%), Query Frame = 1
Query:  502 MGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            MGV+ LGDP V LE +++ +GKS+ SF CP +CTE +FE E VTVFSH LHMHENGQRM+TRQYR +  GNEVL+H+A+VEYYSFLQAG +V   N+  TI+KGD F  +C YDT+ SS+   +V FGLGSE+EM
Sbjct:    1 MGVIKLGDPYVALESQTLPDGKSTFSFGCPSTCTETHFEEEEVTVFSHLLHMHENGQRMLTRQYRTDSDGNEVLLHTADVEYYSFLQAGAHVVSVNDSTTIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEM 135          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A6U4MP62_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4MP62_HEMAN)

HSP 1 Score: 156 bits (394), Expect = 4.780e-40
Identity = 104/312 (33.33%), Postives = 153/312 (49.04%), Query Frame = 1
Query:    1 MQKNFTIPADR-TWYEDTCISASEL-PA---LDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISE----GKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANN-GMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            +Q +  IP DR T Y + C    ++ PA     E+H++GFE  L   T +++HH V+ A       G DC                      EN   +          +  W PGI     P + G R    +GG+ ++ +Q HY+N     G+ DSSG  ++YT+ LR  D G+L LGDP + L  + I E    G S ++   P       +EV+ VTVF  F+HMH+ G+RM+TRQYR  E     LV +   +YY F Q+GG+  ++   G  I+KGD F+++C Y +    I     +FGL S+DEM
Sbjct:  207 LQSDHPIPDDRSTQYHEECYILKDIMPAGSEAGEFHIVGFEPFLDPRTKKHIHHYVVSA-------GNDC----------------------ENSEGM--------TVVWLWGPGIPGYVFPPEAGVRI--MTGGFQAIHIQIHYDNPTLISGLVDSSGFSIFYTNQLRQFDAGILQLGDPNILLFKQPIKEKDGSGYSHLTLTNPARDCTGKWEVDEVTVFERFMHMHKAGERMVTRQYRDGE-----LVRTDFCDYYDFFQSGGFSPRSTAAGFKIKKGDTFDVECFYYSNDKMI-----RFGLASDDEM 469          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A7S0ASV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASV8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.270e-38
Identity = 104/305 (34.10%), Postives = 144/305 (47.21%), Query Frame = 1
Query:   10 NFTIPADRTWYEDTCISASEL-----PALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNG-MTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            N  I  D T Y D C S  +L     PA    H+IGFE ++ ++  +++HHLV+   +G D               D  + S        +GG          A    + PG    ++P++ G   G     Y    L  HY+N   D G+TDSSGVR+YYT   R  D G+L LGDP V L G+ I +G     F CP SCT  NF  E VTV+   LHMHE G+ M     R  E     ++  A V+Y+ F QAG  +++   G  TI+ GD     C ++T  S      +++G GS+DEM
Sbjct:  229 NHPISLDETEYVDLCFSHEDLINLGMPADVPLHIIGFEPLIDSA--KHLHHLVMFG-SGFDG--------------DLTNGSCDQTAVAMSGG---------LALTWGYAPGGVPWEMPDEAGVPLGPGEDSYKMFYLNYHYDNRWQDTGITDSSGVRIYYTSRKRQYDAGILQLGDPIVQLAGEPIGQGLVRHDFNCPSSCTSFNFR-EEVTVYKEVLHMHEKGEFMFNEIIRDGE-----VMRRASVDYFDFEQAG--LHEVQQGTFTIKPGDSIRTSCSFNTTSSKKG---IEYGYGSQDEM 496          
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A1Z5JSD8_FISSO (DOMON domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSD8_FISSO)

HSP 1 Score: 136 bits (342), Expect = 1.400e-32
Identity = 100/303 (33.00%), Postives = 142/303 (46.86%), Query Frame = 1
Query:   10 NFTIPADRTWYEDTCISASELPA----LDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
            N  IP   T Y D C S  +L A     +++ V+GFE IL     E++HH  L                              SY    NG    ++ D+    I+ W  G     LP DVG   G   G Y S  L+ HY+N    EGV DSSGVR YY++ +R +++G+L LGDP + LEG+ + +G +   F+CP +CTE   + E VTV   +LHMH  G  M     R  E     ++H+  V+Y+ F Q G  + K     T++KGD +   C YD    + +     FG  S++EM
Sbjct:  228 NHPIPNVDTEYFDYCYSWDDLLAQGVPAEKFSVVGFEPILD--AIEHLHHFTLFG----------------------------SYEPM-NGEPCSAYADH-LDLIYGWAKGEDPAALPLDVGLYIGP--GTYQSFRLEIHYDNPQLKEGVLDSSGVRFYYSEKMRPVELGLLRLGDPIISLEGQPVGDGLTQHIFDCPSTCTETMLKQE-VTVLREYLHMHYAGATMQNELIRDGE-----VIHTGTVDYFRFDQQGNQLVK-QMPYTVKKGDAYRTICNYDDKGRNAT-----FGFSSQEEM 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD47_ECTSI4.560e-11861.06DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G217_ECTSI8.560e-11252.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G337_ECTSI1.240e-11153.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FP38_ECTSI3.100e-10856.29DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D7G216_ECTSI5.450e-10551.51DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K5A3_9PHAE6.810e-6556.25Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
D7FP36_ECTSI4.510e-5262.22Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
A0A6U4MP62_HEMAN4.780e-4033.33Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0ASV8_9STRA3.270e-3834.10Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1Z5JSD8_FISSO1.400e-3233.00DOMON domain-containing protein n=2 Tax=Fistulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87379contigH-elongata_contig87379:229..2363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.0
Seed ortholog evalue6.8e-98
Seed eggNOG ortholog2880.D8LD47
EggNOG free text desc.octopamine biosynthetic process
EggNOG OGsKOG3568@1,KOG3568@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size909
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87379.16275.1prot_H-elongata_contig87379.16275.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig87379 229..2363 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931274.2856324-CDS-H-elongata_contig87379:228..3151622931274.2856324-CDS-H-elongata_contig87379:228..315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 229..315 +
1691679769.025418-CDS-H-elongata_contig87379:228..3151691679769.025418-CDS-H-elongata_contig87379:228..315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 229..315 +
1622931274.3087857-CDS-H-elongata_contig87379:813..13441622931274.3087857-CDS-H-elongata_contig87379:813..1344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 814..1344 +
1691679769.0362093-CDS-H-elongata_contig87379:813..13441691679769.0362093-CDS-H-elongata_contig87379:813..1344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 814..1344 +
1622931274.3264382-CDS-H-elongata_contig87379:1854..20431622931274.3264382-CDS-H-elongata_contig87379:1854..2043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 1855..2043 +
1691679769.0460389-CDS-H-elongata_contig87379:1854..20431691679769.0460389-CDS-H-elongata_contig87379:1854..2043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 1855..2043 +
1622931274.3481166-CDS-H-elongata_contig87379:2261..23631622931274.3481166-CDS-H-elongata_contig87379:2261..2363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 2262..2363 +
1691679769.0581708-CDS-H-elongata_contig87379:2261..23631691679769.0581708-CDS-H-elongata_contig87379:2261..2363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87379 2262..2363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig87379.16275.1

>prot_H-elongata_contig87379.16275.1 ID=prot_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp
MQKNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHL
VLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYD
FAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVT
DSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSC
TEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYY
SFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSED
EM*
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mRNA from alignment at H-elongata_contig87379:229..2363+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig87379.16275.1 ID=mRNA_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2135bp|location=Sequence derived from alignment at H-elongata_contig87379:229..2363+ (Himanthalia elongata Himel1 dioecious)
ATGCAGAAAAACTTTACAATTCCGGCGGACCGAACCTGGTACGAAGACAC TTGCATCTCAGCTTCTGAATTACCTGCCCTTGACGAGGTACGGTAATCAC AGTTGCTTGTAGTTGACTCGTGATATGAAAGGTGTCAGACGTCCCGAATT TGCTTGTAATAGTAAATTACACGTGATTTGAGTCATGCTTGCTCCCAACG CCGCATCACCTAATATTCTCCTTACAACAATCAGGAGTGATGAGCCGGTA TTATCCGATGTTTACTATGAACAAAGCGCATTGGGAGGTATGTGAGGCCA TTCCGCTGATGTGTGCTGATTTTTGTGGATCACCTTACACGGAAATCTAC AAGACACAGCGCAAAAGATTCAATACTAGAGTTGGGAGTTGTAATATATC AGTTAATTATGGGTATGTGTTACATACCTCTTCAAAACACGAATTAATAT GGACACGAAATTTCACATTGACATCGGGGACGCTTGCTTTGTGATTTCCT CTAAGCGCTAGCGTTATGCACTCGATCTCTCGTGCGTTCTCCCACCTTCA CAAAAAAATCAAACTCGGACGGTACATGGTATTAGTACCACGTCATTGGC TTCGAAGCCATCCTTCAGAACAGCACGTCCGAGTATGTGCACCACCTCGT GCTAATAGCTTACACCGGCACCGACAACTGCGGCCAGGATTGCGCGGAAT TCTTCTCCGATAGCTACTACGACACGAACTCTTCATCTGCACCCTCATAC GTTAGTACGGAAAATGGGGGGGAGATCCCTTCCTTCTGTGATTATGACTT CGCGTACATCCATGCATGGACGCCCGGAATAGCTGACGAACAACTTCCCG AAGATGTCGGCTTCAGGTTTGGCTCAGCTTCCGGCGGGTATACATCTTTG GTGCTCCAGACACACTACAACAACATCGATGGAGATGAAGGCGTGACAGA CAGCTCTGGAGTGCGGGTGTATTACACGGACACCTTGCGCTCTATGGATA TGGGAGTTTTGGCTCTCGGGGATCCCGGCGTATACCTCGAAGGCAAATCT ATTTCGGAGGGGAAATCTTCGATATCGTTTGAATGTCCTGGGTCTTGCAC CGAGGCGAACTTCGAGGTACGTCTGTTGACGCTTGCATGGCACTGGAAGG CGACGGGTAACATATTCATGCTTAAATGAACGAAAGCGCGCTCGTCGGAT TGCGCCTGTCTCTGATTGTAGTGTTTAATCGTGCATTATTATCGTGTCGA GTTGGCCTGTCGTTTTGATGCCATTGATCCTGCAGTTTTATGAAAGCGTC TGTCATTCTCAATGCAACCACACGAGTTCACCGCCAGCTTGAGCCCTACC GTTGTTGTTCAGGGGAGCATACCCGTTGGTTGCCTAAATACGTTCCACGG TGCTTAATGCTTATGACTAGGGAAAGGGGATTTAGGCTTCGTGTAGCCCT CGACATTACAAACGCCTCGGTTCTAAGGTTCGCGCGGCAACGTGGTCGAC GAAGAGCGCTTGGTTCTTCCGGGGGTCAACCCTCCGTACGTTTGATTACG TTTGGTTTATTATTTTGACAGCTACGATGTCTCAACCTGATCAGTCGGGC TTCAACCTGAATGCATCTTACGGTAGGTCGAGAACGTCACGGTCTTCTCT CACTTTCTCCATATGCATGAGAATGGACAGCGGATGATAACCCGGCAGTA CCGCAAAAATGAAAGCGGTAACGAGGTGCTGGTACACTCCGCGGAGGTCG AATACTATTCCTTCTTGCAGGCTGGTGGTTACGTGTACAAGGCCAATAAT GGCATGACCATTCAGGTAAAAGCATGGGGACACCATCGAGCGAACCCGAT AGTCTTGTCTGGTGTTTTGATCGAGAGAGAAAGAAGAGCTCATTCCTCGA GATTTTGGTTCGTGGCATGAGAAAAATATTATTACAGGCCGTGGTCCTTT CTCCGCAGCACCCCCGCGTCATGTGCCAGCCAATGCATCTACAATTGCTG ACCAAATCTCCCATCAATCTCGCTGTTATACAGAAAGGGGATCGATTTGA GATAGATTGTCTCTATGACACGGCACTCTCTTCCATTAGTCCGGATGACG TCAAGTTCGGTCTAGGATCTGAAGACGAAATGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig87379:229..2363+

>mRNA_H-elongata_contig87379.16275.1 ID=mRNA_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig87379:229..2363+ (Himanthalia elongata Himel1 dioecious)
ATGCAGAAAAACTTTACAATTCCGGCGGACCGAACCTGGTACGAAGACAC
TTGCATCTCAGCTTCTGAATTACCTGCCCTTGACGAGATGCAGAAAAACT
TTACAATTCCGGCGGACCGAACCTGGTACGAAGACACTTGCATCTCAGCT
TCTGAATTACCTGCCCTTGACGAGTACCACGTCATTGGCTTCGAAGCCAT
CCTTCAGAACAGCACGTCCGAGTATGTGCACCACCTCGTGCTAATAGCTT
ACACCGGCACCGACAACTGCGGCCAGGATTGCGCGGAATTCTTCTCCGAT
AGCTACTACGACACGAACTCTTCATCTGCACCCTCATACGTTAGTACGGA
AAATGGGGGGGAGATCCCTTCCTTCTGTGATTATGACTTCGCGTACATCC
ATGCATGGACGCCCGGAATAGCTGACGAACAACTTCCCGAAGATGTCGGC
TTCAGGTTTGGCTCAGCTTCCGGCGGGTATACATCTTTGGTGCTCCAGAC
ACACTACAACAACATCGATGGAGATGAAGGCGTGACAGACAGCTCTGGAG
TGCGGGTGTATTACACGGACACCTTGCGCTCTATGGATATGGGAGTTTTG
GCTCTCGGGGATCCCGGCGTATACCTCGAAGGCAAATCTATTTCGGAGGG
GAAATCTTCGATATCGTTTGAATGTCCTGGGTCTTGCACCGAGGCGAACT
TCGAGTACCACGTCATTGGCTTCGAAGCCATCCTTCAGAACAGCACGTCC
GAGTATGTGCACCACCTCGTGCTAATAGCTTACACCGGCACCGACAACTG
CGGCCAGGATTGCGCGGAATTCTTCTCCGATAGCTACTACGACACGAACT
CTTCATCTGCACCCTCATACGTTAGTACGGAAAATGGGGGGGAGATCCCT
TCCTTCTGTGATTATGACTTCGCGTACATCCATGCATGGACGCCCGGAAT
AGCTGACGAACAACTTCCCGAAGATGTCGGCTTCAGGTTTGGCTCAGCTT
CCGGCGGGTATACATCTTTGGTGCTCCAGACACACTACAACAACATCGAT
GGAGATGAAGGCGTGACAGACAGCTCTGGAGTGCGGGTGTATTACACGGA
CACCTTGCGCTCTATGGATATGGGAGTTTTGGCTCTCGGGGATCCCGGCG
TATACCTCGAAGGCAAATCTATTTCGGAGGGGAAATCTTCGATATCGTTT
GAATGTCCTGGGTCTTGCACCGAGGCGAACTTCGAGGTCGAGAACGTCAC
GGTCTTCTCTCACTTTCTCCATATGCATGAGAATGGACAGCGGATGATAA
CCCGGCAGTACCGCAAAAATGAAAGCGGTAACGAGGTGCTGGTACACTCC
GCGGAGGTCGAATACTATTCCTTCTTGCAGGCTGGTGGTTACGTGTACAA
GGCCAATAATGGCATGACCATTCAGGTCGAGAACGTCACGGTCTTCTCTC
ACTTTCTCCATATGCATGAGAATGGACAGCGGATGATAACCCGGCAGTAC
CGCAAAAATGAAAGCGGTAACGAGGTGCTGGTACACTCCGCGGAGGTCGA
ATACTATTCCTTCTTGCAGGCTGGTGGTTACGTGTACAAGGCCAATAATG
GCATGACCATTCAGAAAGGGGATCGATTTGAGATAGATTGTCTCTATGAC
ACGGCACTCTCTTCCATTAGTCCGGATGACGTCAAGTTCGGTCTAGGATC
TGAAGACGAAATGTGAAAAGGGGATCGATTTGAGATAGATTGTCTCTATG
ACACGGCACTCTCTTCCATTAGTCCGGATGACGTCAAGTTCGGTCTAGGA
TCTGAAGACGAAATGTGA
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