mRNA_H-elongata_contig87015.16252.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig87015.16252.1
Unique NamemRNA_H-elongata_contig87015.16252.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 8.340e-105
Identity = 180/262 (68.70%), Postives = 209/262 (79.77%), Query Frame = 1
Query:   91 SPAAARQAFAILEGAQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENMGGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE 876
            S +A+R+A+A+LE AQ +AA++I++  DVVVCSCIGAGNDAF+RAIGG Q+ GFSS+RFSTV+IDEATQATEAAALVPII GCQQLVLVGDQNQLPPTVI PEA+DGGLGTSLFSRLMHAGIKPILL+RQYRMHPAIS+FPS HFY+GQV++GIR +DRPTP GFPWP  + PVAFVRV++ G    +G            RRGQLESRGG E       GG ++S      +ALGTSYCN REA AVA ALEL +  GDVE
Sbjct:  403 SQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVG--------GARRGQLESRGGTEAAV---QGGSFAS------AALGTSYCNVREAEAVAFALELLLREGDVE 647          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.050e-75
Identity = 159/294 (54.08%), Postives = 188/294 (63.95%), Query Frame = 1
Query:   64 SSPSSSKGSSPA--AARQAFAILEGAQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQ---------------------LPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENMGGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE 876
            S P +S  ++P+  A+R+A+A+LE AQ +AA++I++  DVVVCSCIGAGNDAF+RAIGG Q+ GFSS+RFSTV+IDEATQATEAAALVPII GCQQLVLVGDQNQ                     LPPTVI PEA+DGGLGTSLFSRLMHAGIKPILL+R                                P GFPWP  + PVAFVRV++ G   E  + +   GG    +RGQLESRGG E       GG ++S      +ALGTSYCN REA AVA ALEL +  GDVE
Sbjct:  376 SKPRNSSATTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRLI------------------------------PAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGG---AKRGQLESRGGTEAAV---QGGSFAS------AALGTSYCNLREAEAVAFALELLLREGDVE 627          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.510e-56
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 1
Query:  172 DVVVCSCIGAGNDAFIRAIGGGQDSGFSS-VRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGG 678
            DVVVCSCIGAG +    A    +++G ++ + FSTVLIDEATQATE A+LVP+  GC+QL+LVGDQNQLPPT++S  A  GGL TSLF+RLM AG+ P++L RQYRMHP I+ FP   FY G+++S  R  DRPTPRGFPWP    PVAFV V D  +G    +  G GG
Sbjct:    2 DVVVCSCIGAGGEQLAAASEQCEETGAAAGLTFSTVLIDEATQATEPASLVPLTRGCEQLILVGDQNQLPPTILSRGAAAGGLATSLFARLMLAGVAPVVLARQYRMHPRIAAFPGARFYGGRLASAPRAVDRPTPRGFPWPNAAVPVAFVAVRDDSDGARGLEARGSGG 171          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE)

HSP 1 Score: 168 bits (426), Expect = 2.210e-43
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query:  133 AQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIG-GGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLE 711
            A+++A   I+   DVVV SC+GAG   F+ A+   G D   S + FSTVL+DEA+Q TE AALVP++ G +Q++LVGDQNQLPPTV +    +  L  SLF RL+ AG+KP +L RQYRMHP I+ FPS  FY G++ S  +  DRP PRG  WP   APV    V D    H   + D KGGG+    + + E
Sbjct: 1695 AEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPERSPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE-TLHLESRADWKGGGDTTSYQNKRE 1887          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A2V3I143_9EURY (Helicase ATP-binding domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A2V3I143_9EURY)

HSP 1 Score: 166 bits (419), Expect = 3.290e-43
Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 1
Query:  136 QEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRV 627
            + Q   +IL    V+ C+CIG+G++                 RFS VLIDEATQATE AALVP++ G +Q+VL+GD  QLPPTVIS  A++GGL  SLF RL+  GI+P+LL  QYRMHPAIS FP+GHFY+  +  G+   DRPTP G  WP    P+AF+ V
Sbjct:  341 ESQMRDDILNRSQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLVEMGIEPLLLRTQYRMHPAISAFPNGHFYDDLLEDGVTSEDRPTPAGLLWPDWDMPIAFLPV 492          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A7R9VZS5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZS5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.830e-43
Identity = 83/160 (51.88%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  160 LEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHG 639
            L+   V+ C+CIG+G+D               ++ F  VL+DEATQATE A LVP+  GC+QLVLVGD  QLPPTV+S  A++ GLG  LFSRL+  G+ P +LD QYRMHPAI+ FPS  FY G++ +G+ P +R    GFPWP +  PVAFV VN HG
Sbjct:   14 LKAAQVICCTCIGSGSDML------------DNMTFDRVLVDEATQATEPAVLVPLTRGCRQLVLVGDHCQLPPTVLSTIAEEEGLGVPLFSRLVACGVPPFMLDTQYRMHPAIAMFPSDLFYGGKLCNGVSPPERRPLAGFPWPREEFPVAFVPVN-HG 160          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 167 bits (422), Expect = 7.250e-43
Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 1
Query:  133 AQEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQ-DSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVNDHGNGHES 654
            A+++A  +I+ + DVVV S I AG           + D+    V+FSTVLIDEA+Q TE AA VP++ GC+QL+LVGDQNQLP TV+S +A   GL  SLFSRL+ AG+ P++L  QYRMHPAI+ FPS  FY+ ++ S  +P +RPTP GFPWP D  PVAFV V +     ES
Sbjct:  827 AEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEPAGYSES 1001          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A2E0PQ68_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQ68_9EURY)

HSP 1 Score: 164 bits (416), Expect = 8.790e-43
Identity = 81/164 (49.39%), Postives = 107/164 (65.24%), Query Frame = 1
Query:  136 QEQAAKEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRV 627
            + Q   EIL+   V+ C+CIG+G++                 RFS VLIDEATQATE A LVP++ G +Q+V+VGD  QLPPTV+S  A++GGL  SLF RL+  G+  ILLD QYRMHP+IS FP+ HFY+G++  GI  ++RPTP G  WP    PV F+ +
Sbjct:  342 ERQIRDEILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPATLVPLVRGARQVVMVGDHKQLPPTVVSRRAENGGLTRSLFERLVDMGVSTILLDTQYRMHPSISEFPNSHFYDGELMDGIEASERPTPSGLLWPDWDIPVCFIPI 493          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A7S0MPY6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPY6_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 1.510e-42
Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = 1
Query:  160 LEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPV 612
            + E DVVV S +GAG++    A+    D+    +R+ TV++DEA+QATE A LVP+  GC++LVLVGD  QLPPTV SP A   GLG SL +RL+ AG++P +L+ QYRMHPA+++FPS  FY G++ S   PADRP P GF WP    PV
Sbjct:    3 VREADVVVASLVGAGHEGLDDALALLPDAP-GGLRYGTVVVDEASQATEPATLVPLTRGCRRLVLVGDHCQLPPTVASPHALRAGLGVSLLARLVAAGVRPQVLEDQYRMHPALADFPSAAFYAGRLRSVPAPADRPLPPGFDWPRPDTPV 152          
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Match: A0A1Z9IVA1_9EURY (AAA domain-containing protein n=5 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A1Z9IVA1_9EURY)

HSP 1 Score: 163 bits (413), Expect = 2.320e-42
Identity = 83/159 (52.20%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  154 EILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQATEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHAGIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTDTAPVAFVRVN 630
            +IL+   V+ C+CIG+G+D                 RFS VLIDEATQATE A+LVP++ G +Q+VL+GD  QLPPTVIS  A+DGGL  SLF RL+  GI+P LL  QYRMHP+IS FP+ HFY G +  G+ P +R  P G  WP   AP+AFV V+
Sbjct:  348 DILDRCQVLCCTCIGSGHDLL------------DGRRFSRVLIDEATQATEPASLVPLVRGSRQIVLIGDHKQLPPTVISRRAEDGGLSRSLFERLIDMGIEPKLLTTQYRMHPSISEFPNVHFYEGMLEDGVSPEERTAPVGMLWPDWDAPMAFVPVD 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87015.16252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI8.340e-10568.70tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5L473_9PHAE1.050e-7554.08AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7U9_9STRA1.510e-5658.24AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A0G4HN17_9ALVE2.210e-4347.94Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A2V3I143_9EURY3.290e-4351.22Helicase ATP-binding domain-containing protein n=8... [more]
A0A7R9VZS5_9STRA4.830e-4351.88Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A0G4FCG3_VITBC7.250e-4352.00SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
A0A2E0PQ68_9EURY8.790e-4349.39AAA domain-containing protein n=1 Tax=Euryarchaeot... [more]
A0A7S0MPY6_9CRYP1.510e-4252.32Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1Z9IVA1_9EURY2.320e-4252.20AAA domain-containing protein n=5 Tax=unclassified... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87015contigH-elongata_contig87015:149..2461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue3.3e-89
Seed eggNOG ortholog2880.D7FK70
KEGG koko:K14326
KEGG Pathwayko03013,ko03015,map03013,map03015
KEGG ModuleM00430
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
EggNOG OGsCOG1112@1,KOG1802@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Exons4
Model size877
Cds size876
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87015.16252.1prot_H-elongata_contig87015.16252.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig87015 149..2461 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931271.1383853-CDS-H-elongata_contig87015:148..5481622931271.1383853-CDS-H-elongata_contig87015:148..548Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 149..548 -
1691679767.7751465-CDS-H-elongata_contig87015:148..5481691679767.7751465-CDS-H-elongata_contig87015:148..548Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 149..548 -
1622931271.1550999-CDS-H-elongata_contig87015:1073..11771622931271.1550999-CDS-H-elongata_contig87015:1073..1177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 1074..1177 -
1691679767.7878578-CDS-H-elongata_contig87015:1073..11771691679767.7878578-CDS-H-elongata_contig87015:1073..1177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 1074..1177 -
1622931271.172122-CDS-H-elongata_contig87015:1673..18001622931271.172122-CDS-H-elongata_contig87015:1673..1800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 1674..1800 -
1691679767.8022301-CDS-H-elongata_contig87015:1673..18001691679767.8022301-CDS-H-elongata_contig87015:1673..1800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 1674..1800 -
1622931271.1855326-CDS-H-elongata_contig87015:2216..24611622931271.1855326-CDS-H-elongata_contig87015:2216..2461Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 2217..2461 -
1691679767.813852-CDS-H-elongata_contig87015:2216..24611691679767.813852-CDS-H-elongata_contig87015:2216..2461Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87015 2217..2461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig87015.16252.1

>prot_H-elongata_contig87015.16252.1 ID=prot_H-elongata_contig87015.16252.1|Name=mRNA_H-elongata_contig87015.16252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
GLIKRGTAEDAEPEGAEAGVPSSPSSSKGSSPAAARQAFAILEGAQEQAA
KEILEEVDVVVCSCIGAGNDAFIRAIGGGQDSGFSSVRFSTVLIDEATQA
TEAAALVPIICGCQQLVLVGDQNQLPPTVISPEADDGGLGTSLFSRLMHA
GIKPILLDRQYRMHPAISNFPSGHFYNGQVSSGIRPADRPTPRGFPWPTD
TAPVAFVRVNDHGNGHESGQKDGKGGGEVAKRRGQLESRGGIETGQGENM
GGVWSSQSPISSSALGTSYCNNREARAVAIALELFVGGGDVE
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mRNA from alignment at H-elongata_contig87015:149..2461-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig87015.16252.1 ID=mRNA_H-elongata_contig87015.16252.1|Name=mRNA_H-elongata_contig87015.16252.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2313bp|location=Sequence derived from alignment at H-elongata_contig87015:149..2461- (Himanthalia elongata Himel1 dioecious)
GGACTGATAAAGAGGGGAACGGCGGAAGACGCGGAGCCGGAGGGGGCAGA GGCAGGGGTGCCATCGTCGCCGTCCTCATCGAAAGGGTCGTCGCCGGCTG CGGCCAGGCAGGCGTTCGCGATTCTCGAAGGCGCGCAAGAGCAGGCGGCT AAGGAGATCCTCGAGGAGGTGGACGTGGTGGTGTGCAGCTGCATCGGCGC TGGCAACGACGCCTTCATTCGGGCAATCGGGGGCGGCCAAGATAGGCAAG TCTTGAGCGCGTACGTTTTCATTTACGTAACAGTATCGACGAGTTTACGC GATCGGCAGGAAGACCTGTTGCTTTTAAGATAATCAGTAGAAAAGAAAAA AATGCTAGAGGTGAGGCGGGGACAGGGATCTTTGGAGTGAAGACCGGTAC CGCCGGGTGATGCCGAACGGTGAGTTCCTTCGCTCTCTCATGAAGTTTCG CCGCGGAATCGCGTCCAGTCCAGTCTAGTCCAGTCGCGTCGTACGCGCAA ATGTAACTGGCCGGCCTGCATCAAGTGTCGTTTGGACTCTCGCCCATTAC CATCGCATCGACCCCACAAGTTAACCGCGGTGTGTTATTTTTATGTTTGT AGTTTGCACCTCCTTATGGGCTAGGGTTTTGTTCTTTCTGGCGTCGCTCT GCCATTTACAGCGGGTTCAGCTCAGTCCGCTTCTCCACGGTTCTCATCGA TGAGGCCACCCAGGCCACCGAGGCGGCCGCCCTCGTGCCCATCATCTGCG GCTGTCAGCAGCTTGTCCTGGTGGGCGATCAGAACCAGGTCGGTCGTCGT CGTGCCGCTGCGACTGTCGCTACCGCTGGGCGCCGTTTTGTCAACACGTC TTAGAGGGCACCGCCCCTCGGCAGTGGAAAACAAAGCGCGTTCAGGGGTG GAAAAAGCCGAGCCATTCGTGGCTTTGGAGTGCATGCGACACGCCTCAAA AATTAGGTCGAAACCTAATGAGTCGGGGATAACCTTTTTCGCTCCCTCCC TCTTTGCCTTTGGCACGCCGCCCCTACTGAAAATCCTTCCTCGTGCAGCG TTCCTGAGTCAGGACGGACGTGGAAGACACCCATCTTGTTGCCGCAAAGA TATTATAGTGCTTGGGGGGGGGGGGGGGGGAATTTGTGCGTCGGTCCCAA GCAAATGATTTTTCGAACCGCTGAAGACCTCAAAGGTTTGCGCCTTTCTC GCGTTTGAAGATATTCGTCTACGATACGTATGTATGTGGTCCCCCGCGTC CCCCGCGTTACCATCTTGTTGCCGGATTTGGCAGCTGCCGCCAACGGTCA TAAGCCCGGAGGCTGATGATGGTGGTCTCGGTACGAGCCTTTTCTCCCGC CTAATGCACGCGGGTATCAAGCCCATCCTCCTCGACAGGTGCGCGTAATA ATAACAACACCTGGTAGATCCCACCCCACACTGGGTTTTTGTGACGAGGC GTTTGGAGAACGGGGGTTGCCCCTAACTTCCAAGCACAAGGTTGCATAAG TTCTGCACTTTATTGCACTATACTTTACTCTATTATACTATATACGATAC TGTTCTATGCTACGTTAGGCTCTATATATCGTGCTGTTATGTTATGTGCT ATACTAAACTATGCTTCGTACTATACTTTACTGCGCTGTGCTCGGAGGTC TGACCTCGTATCCGTAGGGCCGCAAGTCTCCTCGCCTGTCGTTAGCGTTG GTTGAACTCGTGTGATCGATCCAACGATCGAAGCTAGACATAATTTTCGG ATCGCCGACACCGCTGCCGCTGCTGCTGCTGCGAGTTGGTCATTTTCATC TTCTCCTTCCATCGCTCATTCCTTCACCCCGCACTCGAAACGTCTTTTTA TTTTTTCACCTGCAACTCCCCCCTCCCCGCCCCCCGATGTAACGCTACCG CCGCCCGTGGCAGGCAATATCGGATGCACCCGGCCATCTCGAACTTCCCC TCCGGGCACTTCTACAATGGCCAGGTCAGCTCGGGGATCCGTCCCGCCGA TCGCCCGACCCCGCGCGGCTTTCCGTGGCCGACAGACACGGCTCCCGTCG CTTTCGTCCGGGTCAACGACCATGGGAACGGTCATGAAAGCGGCCAGAAA GACGGCAAGGGGGGTGGAGAGGTGGCGAAGAGAAGGGGACAGCTGGAGAG CAGGGGTGGCATCGAGACGGGGCAGGGTGAGAACATGGGTGGGGTTTGGT CGTCGCAGTCCCCTATATCCTCTTCCGCTCTTGGGACTTCCTACTGCAAC AACAGGGAGGCGCGAGCCGTCGCAATCGCGCTGGAGCTCTTTGTCGGCGG CGGTGACGTTGAG
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Coding sequence (CDS) from alignment at H-elongata_contig87015:149..2461-

>mRNA_H-elongata_contig87015.16252.1 ID=mRNA_H-elongata_contig87015.16252.1|Name=mRNA_H-elongata_contig87015.16252.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1752bp|location=Sequence derived from alignment at H-elongata_contig87015:149..2461- (Himanthalia elongata Himel1 dioecious)
GGACTGATAAAGAGGGGAACGGCGGAAGACGCGGAGCCGGAGGGGGCAGA
GGCAGGGGTGCCATCGTCGCCGTCCTCATCGAAAGGGTCGTCGCCGGCTG
CGGCCAGGCAGGCGTTCGCGATTCTCGAAGGCGCGCAAGAGCAGGCGGCT
AAGGAGATCCTCGAGGAGGTGGACGTGGTGGTGTGCAGCTGCATCGGCGC
TGGCAACGACGCCTTCATTCGGGCAATCGGGGGCGGCCAAGATAGGGACT
GATAAAGAGGGGAACGGCGGAAGACGCGGAGCCGGAGGGGGCAGAGGCAG
GGGTGCCATCGTCGCCGTCCTCATCGAAAGGGTCGTCGCCGGCTGCGGCC
AGGCAGGCGTTCGCGATTCTCGAAGGCGCGCAAGAGCAGGCGGCTAAGGA
GATCCTCGAGGAGGTGGACGTGGTGGTGTGCAGCTGCATCGGCGCTGGCA
ACGACGCCTTCATTCGGGCAATCGGGGGCGGCCAAGATAGCGGGTTCAGC
TCAGTCCGCTTCTCCACGGTTCTCATCGATGAGGCCACCCAGGCCACCGA
GGCGGCCGCCCTCGTGCCCATCATCTGCGGCTGTCAGCAGCTTGTCCTGG
TGGGCGATCAGAACCAGCGGGTTCAGCTCAGTCCGCTTCTCCACGGTTCT
CATCGATGAGGCCACCCAGGCCACCGAGGCGGCCGCCCTCGTGCCCATCA
TCTGCGGCTGTCAGCAGCTTGTCCTGGTGGGCGATCAGAACCAGCTGCCG
CCAACGGTCATAAGCCCGGAGGCTGATGATGGTGGTCTCGGTACGAGCCT
TTTCTCCCGCCTAATGCACGCGGGTATCAAGCCCATCCTCCTCGACAGCT
GCCGCCAACGGTCATAAGCCCGGAGGCTGATGATGGTGGTCTCGGTACGA
GCCTTTTCTCCCGCCTAATGCACGCGGGTATCAAGCCCATCCTCCTCGAC
AGGCAATATCGGATGCACCCGGCCATCTCGAACTTCCCCTCCGGGCACTT
CTACAATGGCCAGGTCAGCTCGGGGATCCGTCCCGCCGATCGCCCGACCC
CGCGCGGCTTTCCGTGGCCGACAGACACGGCTCCCGTCGCTTTCGTCCGG
GTCAACGACCATGGGAACGGTCATGAAAGCGGCCAGAAAGACGGCAAGGG
GGGTGGAGAGGTGGCGAAGAGAAGGGGACAGCTGGAGAGCAGGGGTGGCA
TCGAGACGGGGCAGGGTGAGAACATGGGTGGGGTTTGGTCGTCGCAGTCC
CCTATATCCTCTTCCGCTCTTGGGACTTCCTACTGCAACAACAGGGAGGC
GCGAGCCGTCGCAATCGCGCTGGAGCTCTTTGTCGGCGGCGGTGACGTTG
AGGCAATATCGGATGCACCCGGCCATCTCGAACTTCCCCTCCGGGCACTT
CTACAATGGCCAGGTCAGCTCGGGGATCCGTCCCGCCGATCGCCCGACCC
CGCGCGGCTTTCCGTGGCCGACAGACACGGCTCCCGTCGCTTTCGTCCGG
GTCAACGACCATGGGAACGGTCATGAAAGCGGCCAGAAAGACGGCAAGGG
GGGTGGAGAGGTGGCGAAGAGAAGGGGACAGCTGGAGAGCAGGGGTGGCA
TCGAGACGGGGCAGGGTGAGAACATGGGTGGGGTTTGGTCGTCGCAGTCC
CCTATATCCTCTTCCGCTCTTGGGACTTCCTACTGCAACAACAGGGAGGC
GCGAGCCGTCGCAATCGCGCTGGAGCTCTTTGTCGGCGGCGGTGACGTTG
AG
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