prot_H-elongata_contig8701.16250.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8701.16250.1
Unique Nameprot_H-elongata_contig8701.16250.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length362
Homology
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A6H5L3J4_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3J4_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 3.900e-51
Identity = 174/380 (45.79%), Postives = 192/380 (50.53%), Query Frame = 0
Query:    1 TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELRDMARRLLLRYFFQA---------------------------------PASARG------SCVVANHP-PGYRAGSSLYSLHFLIFXXXXXXXXXXSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAGAGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQALDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTK------------NASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYGVIAPGGAVGG 328
            TLV A+AEA+GAR  A  ELLGHF+RAGGG+V KAASLY  +ADEFVELR+MARR                                          PA+            +A+ P PG           F   XXXXXXXXXX                                             AGE    ++                 P       +   +Q  P     Q LD DFP FEADP D+  GR EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGV TGSLLVALDGQSTK            N+SHFEVIELLR+ANRPLTLRLRRV RERLL RR EMRALTRP+GV   GGA+ G
Sbjct:  681 TLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYTTMADEFVELREMARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPAAEVAIEEGALEAALADAPRPGGSEEEQDRGEKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNVAGEIGSESSXXXXXXXXXXXXXXXXXPPPAEVVEAQQDDQLLP-----QELDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKVPNGGGRSIERWNSSHFEVIELLRVANRPLTLRLRRVGRERLLRRRAEMRALTRPHGVF--GGALNG 1053          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: D7FMR1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.930e-45
Identity = 143/296 (48.31%), Postives = 157/296 (53.04%), Query Frame = 0
Query:    1 TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELRDMARRLLLRYFFQAPASARGSCVVANHPPGYRAGSSLYSLHFLIFXXXXXXXXXXSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAGAGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQALDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLR 296
            TLV A+AEA+GAR  A  ELLGHF+RAGGG+V KAASLY  +ADEFVELR+MARR  +R    AP                              XXXXXXXXXX                                                                              +     Q+  +  PQ+ LD DFP FEADP D+  GR EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGV TGSLLVALDGQSTKN+SHFEVIELLR+ANRPLTLRLR
Sbjct:  610 TLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYATMADEFVELREMARRRHIR----APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------XXXXXXXXXXXXXXXXAQEVEGQQDDQLLPQE-LDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKNSSHFEVIELLRVANRPLTLRLR 866          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S1UDB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.390e-17
Identity = 58/99 (58.59%), Postives = 65/99 (65.66%), Query Frame = 0
Query:  215 IEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRAL 313
            I  G  EY V + S KLGMTVENVLERTVVR+    G A AAG+  GSLLV L  QST   SHFE IE L+   RPL LRLR++   RL  RR+EM AL
Sbjct:  204 IPAGPGEYDVVLHSDKLGMTVENVLERTVVRSVIQDGAAHAAGILEGSLLVRLGSQSTAAMSHFETIEHLKQVKRPLQLRLRKMPNHRLERRRSEMSAL 302          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A1Z5K9H7_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9H7_FISSO)

HSP 1 Score: 85.1 bits (209), Expect = 3.200e-14
Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 0
Query:  222 YSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            Y V I  + LG+TVENVLERTVVR  APGG A+ AG   GSL+V +    TKN +HFE I+ LR +NRPLTL LR VA + L   R EM  L +  G
Sbjct:  443 YEVKIEREMLGLTVENVLERTVVRTVAPGGPAKKAGAKVGSLIVKVGNVDTKNLTHFETIDELRQSNRPLTLILRPVADDALRLAREEMGRLIKGSG 539          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7R9WDN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDN4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-14
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  221 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            +Y V+I  + LG+TVENVLERTVVR   PGG A  AG   GSL+V +    T N +HFE I+ LR + RPL L LRR+ ++ L   R EM  L R  G
Sbjct:   73 DYLVSIEREMLGLTVENVLERTVVRTVLPGGAAGRAGARVGSLIVKVGTVDTSNLTHFETIDELRQSQRPLRLVLRRIGKDALRGAREEMGRLIRGGG 170          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A1Z5JV25_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV25_FISSO)

HSP 1 Score: 84.7 bits (208), Expect = 4.050e-14
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0
Query:  222 YSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            Y V I  + LG+TVENVLERTVVR  APGG A+ AG   GSL+V +    TKN +HFE I+ LR +NRPLTL LR +A + L   R EM  L +  G
Sbjct:  440 YEVKIEREMLGLTVENVLERTVVRTVAPGGPAKKAGAKVGSLIVKVGNVDTKNLTHFETIDELRQSNRPLTLILRPIADDALRLAREEMGRLIKGSG 536          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S1VWL7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWL7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.760e-13
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 0
Query:  221 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            +Y VTI  + LG+TVENVLERTVVR   PGG A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L LR ++ + L + R EM  L R  G
Sbjct:  169 DYVVTIDREMLGLTVENVLERTVVRTVLPGGAAKKAGAKVGSLIVKVGNVETKNLTHFETIDELRQSQRPLKLALRPISADSLRAAREEMGRLIRGGG 266          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S2RKP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKP5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.990e-13
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0
Query:  218 GRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTR 315
            G  +Y V I+  KLGMTVENVLERTVV      G A + GV  GSLLV + G++T N +H +VI  LR+  RPL LRLR +    L  +R  M AL R
Sbjct:    3 GEEDYEVCITGAKLGMTVENVLERTVVHEVERDGPAASCGVTKGSLLVTVLGEATANLTHDDVIARLRLPQRPLVLRLRCLDGRALQEQRARMNALVR 100          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S3PAB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAB4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.870e-13
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 0
Query:  214 DIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            D+     EY V I  + LG+TVENVLERTVVR    GG A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L L++++ + L S R EM  L R  G
Sbjct:  518 DLSTKPGEYVVQIEREMLGLTVENVLERTVVRTVLAGGPAKKAGARVGSLIVKVGNVETKNLTHFETIDELRQSQRPLVLVLKQISEDALRSAREEMGRLIRGSG 622          
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S0ULC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULC4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.400e-12
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0
Query:  221 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 318
            EY V I  + LG+TVENVLERTVVR     G A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L LR++  E L + R EM  L R  G
Sbjct:   26 EYCVIIEREMLGLTVENVLERTVVRTVLEAGPAKKAGAKVGSLIVKVGNIETKNLTHFETIDELRQSQRPLVLVLRQIPEESLKAAREEMGRLIRGSG 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3J4_9PHAE3.900e-5145.79PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMR1_ECTSI2.930e-4548.31PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1UDB0_9STRA1.390e-1758.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1Z5K9H7_FISSO3.200e-1454.64PDZ domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7R9WDN4_9STRA3.910e-1450.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A1Z5JV25_FISSO4.050e-1453.61PDZ domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S1VWL7_9STRA1.760e-1351.02Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2RKP5_9STRA6.990e-1350.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3PAB4_9STRA7.870e-1347.62Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S0ULC4_9STRA2.400e-1250.00Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 229..299
e-value: 3.1E-7
score: 40.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 221..299
score: 11.28
NoneNo IPR availableGENE3D2.30.42.10coord: 210..311
e-value: 1.6E-9
score: 39.5
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 228..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8701contigH-elongata_contig8701:1873..4222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8701.16250.1mRNA_H-elongata_contig8701.16250.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8701 1872..4222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8701.16250.1 ID=prot_H-elongata_contig8701.16250.1|Name=mRNA_H-elongata_contig8701.16250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELR
DMARRLLLRYFFQAPASARGSCVVANHPPGYRAGSSLYSLHFLIFFDDSN
NNNNSSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAG
AGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQA
LDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPG
GGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVAR
ERLLSRRTEMRALTRPYGVIAPGGAVGGTMTHDQATAAAERSSHPKARHL
SPPPPPPPRGLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf