mRNA_H-elongata_contig8701.16250.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8701.16250.1
Unique NamemRNA_H-elongata_contig8701.16250.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A6H5L3J4_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3J4_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 3.900e-51
Identity = 174/380 (45.79%), Postives = 192/380 (50.53%), Query Frame = 1 
Query:    1 TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELRDMARRLLLRYFFQA---------------------------------PASARG------SCVVANHP-PGYRAGSSLYSLHFLIFXXXXXXXXXXSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAGAGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQALDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTK------------NASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYGVIAPGGAVGG 984
            TLV A+AEA+GAR  A  ELLGHF+RAGGG+V KAASLY  +ADEFVELR+MARR                                          PA+            +A+ P PG           F   XXXXXXXXXX                                             AGE    ++                 P       +   +Q  P     Q LD DFP FEADP D+  GR EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGV TGSLLVALDGQSTK            N+SHFEVIELLR+ANRPLTLRLRRV RERLL RR EMRALTRP+GV   GGA+ G
Sbjct:  681 TLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYTTMADEFVELREMARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPAAEVAIEEGALEAALADAPRPGGSEEEQDRGEKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNVAGEIGSESSXXXXXXXXXXXXXXXXXPPPAEVVEAQQDDQLLP-----QELDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKVPNGGGRSIERWNSSHFEVIELLRVANRPLTLRLRRVGRERLLRRRAEMRALTRPHGVF--GGALNG 1053
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: D7FMR1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 2.930e-45
Identity = 143/296 (48.31%), Postives = 157/296 (53.04%), Query Frame = 1 
Query:    1 TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELRDMARRLLLRYFFQAPASARGSCVVANHPPGYRAGSSLYSLHFLIFXXXXXXXXXXSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAGAGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQALDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLR 888
            TLV A+AEA+GAR  A  ELLGHF+RAGGG+V KAASLY  +ADEFVELR+MARR  +R    AP                              XXXXXXXXXX                                                                              +     Q+  +  PQ+ LD DFP FEADP D+  GR EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGV TGSLLVALDGQSTKN+SHFEVIELLR+ANRPLTLRLR
Sbjct:  610 TLVGAMAEAIGARRGASLELLGHFLRAGGGDVEKAASLYATMADEFVELREMARRRHIR----APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------XXXXXXXXXXXXXXXXAQEVEGQQDDQLLPQE-LDVDFPSFEADPTDLATGRDEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVETGSLLVALDGQSTKNSSHFEVIELLRVANRPLTLRLR 866
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S1UDB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.390e-17
Identity = 58/99 (58.59%), Postives = 65/99 (65.66%), Query Frame = 1 
Query:  643 IEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRAL 939
            I  G  EY V + S KLGMTVENVLERTVVR+    G A AAG+  GSLLV L  QST   SHFE IE L+   RPL LRLR++   RL  RR+EM AL
Sbjct:  204 IPAGPGEYDVVLHSDKLGMTVENVLERTVVRSVIQDGAAHAAGILEGSLLVRLGSQSTAAMSHFETIEHLKQVKRPLQLRLRKMPNHRLERRRSEMSAL 302
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A1Z5K9H7_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9H7_FISSO)

HSP 1 Score: 85.1 bits (209), Expect = 3.200e-14
Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 1 
Query:  664 YSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            Y V I  + LG+TVENVLERTVVR  APGG A+ AG   GSL+V +    TKN +HFE I+ LR +NRPLTL LR VA + L   R EM  L +  G
Sbjct:  443 YEVKIEREMLGLTVENVLERTVVRTVAPGGPAKKAGAKVGSLIVKVGNVDTKNLTHFETIDELRQSNRPLTLILRPVADDALRLAREEMGRLIKGSG 539
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7R9WDN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDN4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-14
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1 
Query:  661 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            +Y V+I  + LG+TVENVLERTVVR   PGG A  AG   GSL+V +    T N +HFE I+ LR + RPL L LRR+ ++ L   R EM  L R  G
Sbjct:   73 DYLVSIEREMLGLTVENVLERTVVRTVLPGGAAGRAGARVGSLIVKVGTVDTSNLTHFETIDELRQSQRPLRLVLRRIGKDALRGAREEMGRLIRGGG 170
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A1Z5JV25_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV25_FISSO)

HSP 1 Score: 84.7 bits (208), Expect = 4.050e-14
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 1 
Query:  664 YSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            Y V I  + LG+TVENVLERTVVR  APGG A+ AG   GSL+V +    TKN +HFE I+ LR +NRPLTL LR +A + L   R EM  L +  G
Sbjct:  440 YEVKIEREMLGLTVENVLERTVVRTVAPGGPAKKAGAKVGSLIVKVGNVDTKNLTHFETIDELRQSNRPLTLILRPIADDALRLAREEMGRLIKGSG 536
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S1VWL7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWL7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.760e-13
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:  661 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            +Y VTI  + LG+TVENVLERTVVR   PGG A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L LR ++ + L + R EM  L R  G
Sbjct:  169 DYVVTIDREMLGLTVENVLERTVVRTVLPGGAAKKAGAKVGSLIVKVGNVETKNLTHFETIDELRQSQRPLKLALRPISADSLRAAREEMGRLIRGGG 266
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S2RKP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKP5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.990e-13
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1 
Query:  652 GRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTR 945
            G  +Y V I+  KLGMTVENVLERTVV      G A + GV  GSLLV + G++T N +H +VI  LR+  RPL LRLR +    L  +R  M AL R
Sbjct:    3 GEEDYEVCITGAKLGMTVENVLERTVVHEVERDGPAASCGVTKGSLLVTVLGEATANLTHDDVIARLRLPQRPLVLRLRCLDGRALQEQRARMNALVR 100
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S3PAB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAB4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.870e-13
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1 
Query:  640 DIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            D+     EY V I  + LG+TVENVLERTVVR    GG A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L L++++ + L S R EM  L R  G
Sbjct:  518 DLSTKPGEYVVQIEREMLGLTVENVLERTVVRTVLAGGPAKKAGARVGSLIVKVGNVETKNLTHFETIDELRQSQRPLVLVLKQISEDALRSAREEMGRLIRGSG 622
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BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Match: A0A7S0ULC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULC4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.400e-12
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1 
Query:  661 EYSVTISSQKLGMTVENVLERTVVRAAAPGGGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVARERLLSRRTEMRALTRPYG 954
            EY V I  + LG+TVENVLERTVVR     G A+ AG   GSL+V +    TKN +HFE I+ LR + RPL L LR++  E L + R EM  L R  G
Sbjct:   26 EYCVIIEREMLGLTVENVLERTVVRTVLEAGPAKKAGAKVGSLIVKVGNIETKNLTHFETIDELRQSQRPLVLVLRQIPEESLKAAREEMGRLIRGSG 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8701.16250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3J4_9PHAE3.900e-5145.79PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMR1_ECTSI2.930e-4548.31PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1UDB0_9STRA1.390e-1758.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1Z5K9H7_FISSO3.200e-1454.64PDZ domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7R9WDN4_9STRA3.910e-1450.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A1Z5JV25_FISSO4.050e-1453.61PDZ domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S1VWL7_9STRA1.760e-1351.02Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2RKP5_9STRA6.990e-1350.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3PAB4_9STRA7.870e-1347.62Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S0ULC4_9STRA2.400e-1250.00Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8701contigH-elongata_contig8701:1872..4222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.9
Seed ortholog evalue2.2e-42
Seed eggNOG ortholog2880.D7FMR1
EggNOG OGs2D5KP@1,2SYW4@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPDZ domain
Ec32 orthologEc-23_001270.1
Exons5
Model size1087
Cds size1086
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8701.16250.1prot_H-elongata_contig8701.16250.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8701 1873..4222 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931270.68967-CDS-H-elongata_contig8701:1872..21391622931270.68967-CDS-H-elongata_contig8701:1872..2139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 1873..2139 -
1691679767.6979609-CDS-H-elongata_contig8701:1872..21391691679767.6979609-CDS-H-elongata_contig8701:1872..2139Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 1873..2139 -
1622931270.9262123-CDS-H-elongata_contig8701:2639..28051622931270.9262123-CDS-H-elongata_contig8701:2639..2805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 2640..2805 -
1691679767.7132497-CDS-H-elongata_contig8701:2639..28051691679767.7132497-CDS-H-elongata_contig8701:2639..2805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 2640..2805 -
1622931270.947789-CDS-H-elongata_contig8701:3113..34311622931270.947789-CDS-H-elongata_contig8701:3113..3431Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 3114..3431 -
1691679767.7239826-CDS-H-elongata_contig8701:3113..34311691679767.7239826-CDS-H-elongata_contig8701:3113..3431Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 3114..3431 -
1622931270.9690082-CDS-H-elongata_contig8701:3542..37161622931270.9690082-CDS-H-elongata_contig8701:3542..3716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 3543..3716 -
1691679767.737464-CDS-H-elongata_contig8701:3542..37161691679767.737464-CDS-H-elongata_contig8701:3542..3716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 3543..3716 -
1622931270.9862309-CDS-H-elongata_contig8701:4061..42221622931270.9862309-CDS-H-elongata_contig8701:4061..4222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 4062..4222 -
1691679767.7494748-CDS-H-elongata_contig8701:4061..42221691679767.7494748-CDS-H-elongata_contig8701:4061..4222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8701 4062..4222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8701.16250.1

>prot_H-elongata_contig8701.16250.1 ID=prot_H-elongata_contig8701.16250.1|Name=mRNA_H-elongata_contig8701.16250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
TLVAAVAEAVGARAAAPQELLGHFVRAGGGNVAKAASLYRAVADEFVELR
DMARRLLLRYFFQAPASARGSCVVANHPPGYRAGSSLYSLHFLIFFDDSN
NNNNSSVLEIGKRRNASSTYAGGVPTESTPLLVTPLVSVTSLIPAGKLAG
AGEPVPSATAAADGGAGQRKEGVFTKPRCESSFSSAASNQEAPRRPPQQA
LDADFPFFEADPRDIEKGRAEYSVTISSQKLGMTVENVLERTVVRAAAPG
GGAEAAGVGTGSLLVALDGQSTKNASHFEVIELLRIANRPLTLRLRRVAR
ERLLSRRTEMRALTRPYGVIAPGGAVGGTMTHDQATAAAERSSHPKARHL
SPPPPPPPRGLH
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mRNA from alignment at H-elongata_contig8701:1872..4222-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8701.16250.1 ID=mRNA_H-elongata_contig8701.16250.1|Name=mRNA_H-elongata_contig8701.16250.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2351bp|location=Sequence derived from alignment at H-elongata_contig8701:1872..4222- (Himanthalia elongata Himel1 dioecious)
ACTCTGGTGGCTGCTGTGGCGGAGGCAGTAGGAGCTCGCGCCGCGGCTCC
TCAGGAGCTCCTTGGGCACTTCGTCCGCGCGGGCGGCGGAAACGTGGCAA
AGGCCGCGTCGCTGTACCGGGCCGTCGCGGACGAGTTCGTCGAGCTCAGG
GACATGGCAAGGTGATGAAGTGGTGCATCGCACGGTGTGTGCCGATACGA
CTATCACACAATCAGATGGAATTTTGTGCGGCGACTCCCGTTTTCTATTT
TTTTTTAAGGTGTTTCCATCCCTTTTTGCAAGTCTGGCCGTTTGGGCGTG
TGGGGGGTGTACATGTGTTTGTGCCATCGAGGGAGAAGAAAAATCCACCA
GTCGTACGTTGCATTTCGTTCCAATCGTGCGACTAGATAAATACACGATT
GTTATCATGTCATTTTCCTCAAGCTACCGCGCCCCGCCGCGTGGGGACGA
CTGTTATGGCTTCATTTTTCTCGAGCGTCCGCTTCGGCGTCCGGTTGCGT
GGAGAGACGACTTTTATTACGTTATTTTTTTCAGGCCCCGGCTTCCGCAC
GCGGAAGCTGCGTTGTTGCTAATCATCCGCCTGGATACCGAGCCGGATCA
TCACTCTATTCCCTTCATTTCCTTATTTTTTTCGACGACAGCAACAACAA
TAATAATAGTAGTGTATTGGAAATTGGAAAGTAAAATCCCTACAGTACAA
AGTGTTTTGCGGCACCTTCCCGCTTCTCGCGTGATTTTTTCGGGGCGCCC
GCGACCGAGCTGATCCTTTATTTCGGTGCCGTTGACAGGAGGCGACGGAA
CGCGAGCTCGACGTACGCTGGGGGCGTCCCGACGGAATCGACGCCTCTGT
TGGTCACGCCCTTGGTATCGGTTACATCATTAATCCCGGCGGGGAAGCTC
GCAGGCGCGGGAGAACCAGTGCCCTCAGCGACGGCAGCAGCAGATGGCGG
CGCCGGCCAAAGGAAGGAAGGAGTATTCACGAAGCCTCGCTGTGAATCAT
CATTCTCTTCCGCGGCGTCGAACCAAGAGGCACCACGGCGTCCGCCACAG
CAGGCGCTCGATGCGGACTTCCCCTTCTTTGAAGCGGACCCGAGGGATAT
CGAGAAAGGGTAAGAGATGCCGGTCTGCCGTCGACCGAAGCTCTCGCACC
GGCGGTCCTACCGCACTGGCGCGGGAAGTTAACAAAATAAACCAAGCACA
CGTTATCGTGATTTTACCCTCGCGAGCTTGTGCAGCGAAAACTCTTGTCC
ATTTTTCTAGTGTTTTAGGAAGTATTATGAGCATAAAACAGTACCATACG
GCCGCGGTAGCTCTGCTACTGTGTGCTCGTACGCGGCGTTTCACGCCTAA
CCATTCCGTCACACACCCCTATCTGGATCTCTTTTTTTCTTTTATGTTAC
ATCTATACGCGGCTCAGGCGAGCCGAGTACTCTGTGACGATATCGTCTCA
AAAGCTGGGGATGACGGTGGAGAACGTCTTGGAGCGTACCGTCGTGAGGG
CGGCTGCGCCCGGGGGTGGGGCGGAGGCGGCTGGCGTAGGGACGGGATCG
CTTCTCGTTGCGTTGGACGGACAGTCGACCAAGGTTAGGCGGACGTGGAG
ACACGCCTCAATAGGGCCGTACCCCATATTCTAGAGTAGCGATTTCGTCG
ATGGAGGTAGTGGAAGAAGGGCCTGGTTGGTGGGCGAAACGTTTCGCGTA
GCTCTTCCTTACACCGGGTGCGAGCCGGGGTTTCTCAGCTCGCCAAAATA
TGAAGAGGCATGTTTTCTCTTGCAGGAGAAATATGCTCCCAATTCATTGC
AATCACAATCAAGAAAAGCGTGGGGGTGTGGGAGGGGAGTCGTAGGCGTG
TATGTACGTCCGTAGCATAAAAACGAGATTCTGCTCTTCCCCGAAAGACG
GGTCGCGAAGTACCCCCTTGTTTGATTTTTTCCAGATACCCGTATGATCC
CCGCTCTTGATCTGCCCCACCCTCCTCCTGAGGACGCGTGGTTTGTCTAA
TGATCTAACAACTAAGGCATGAAAAACTAGAGCATCCCCCCCCCCTCCCG
ATCCTCTTTTTGTTTTTGTTTTTTTTCACAAAGAACGCGTCGCACTTCGA
GGTAATCGAGCTCCTCCGCATCGCGAATCGCCCGCTCACGCTGCGGCTGC
GGCGCGTCGCGAGAGAACGCCTCCTCAGCCGTCGCACCGAAATGAGGGCT
CTTACCCGCCCTTACGGGGTGATAGCCCCCGGCGGCGCTGTCGGGGGCAC
GATGACGCACGACCAAGCGACAGCGGCGGCAGAGAGGAGTTCCCACCCGA
AGGCGCGTCATTTGTCCCCGCCCCCACCTCCTCCGCCGCGAGGGCTACAC
C
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Coding sequence (CDS) from alignment at H-elongata_contig8701:1872..4222-

>mRNA_H-elongata_contig8701.16250.1 ID=mRNA_H-elongata_contig8701.16250.1|Name=mRNA_H-elongata_contig8701.16250.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2172bp|location=Sequence derived from alignment at H-elongata_contig8701:1872..4222- (Himanthalia elongata Himel1 dioecious)
ACTCTGGTGGCTGCTGTGGCGGAGGCAGTAGGAGCTCGCGCCGCGGCTCC
TCAGGAGCTCCTTGGGCACTTCGTCCGCGCGGGCGGCGGAAACGTGGCAA
AGGCCGCGTCGCTGTACCGGGCCGTCGCGGACGAGTTCGTCGAGCTCAGG
GACATGGCAAGACTCTGGTGGCTGCTGTGGCGGAGGCAGTAGGAGCTCGC
GCCGCGGCTCCTCAGGAGCTCCTTGGGCACTTCGTCCGCGCGGGCGGCGG
AAACGTGGCAAAGGCCGCGTCGCTGTACCGGGCCGTCGCGGACGAGTTCG
TCGAGCTCAGGGACATGGCAAGACGACTTTTATTACGTTATTTTTTTCAG
GCCCCGGCTTCCGCACGCGGAAGCTGCGTTGTTGCTAATCATCCGCCTGG
ATACCGAGCCGGATCATCACTCTATTCCCTTCATTTCCTTATTTTTTTCG
ACGACAGCAACAACAATAATAATAGTAGTGTATTGGAAATTGGAAAACGA
CTTTTATTACGTTATTTTTTTCAGGCCCCGGCTTCCGCACGCGGAAGCTG
CGTTGTTGCTAATCATCCGCCTGGATACCGAGCCGGATCATCACTCTATT
CCCTTCATTTCCTTATTTTTTTCGACGACAGCAACAACAATAATAATAGT
AGTGTATTGGAAATTGGAAAGCGACGGAACGCGAGCTCGACGTACGCTGG
GGGCGTCCCGACGGAATCGACGCCTCTGTTGGTCACGCCCTTGGTATCGG
TTACATCATTAATCCCGGCGGGGAAGCTCGCAGGCGCGGGAGAACCAGTG
CCCTCAGCGACGGCAGCAGCAGATGGCGGCGCCGGCCAAAGGAAGGAAGG
AGTATTCACGAAGCCTCGCTGTGAATCATCATTCTCTTCCGCGGCGTCGA
ACCAAGAGGCACCACGGCGTCCGCCACAGCAGGCGCTCGATGCGGACTTC
CCCTTCTTTGAAGCGGACCCGAGGGATATCGAGAAAGGGCGACGGAACGC
GAGCTCGACGTACGCTGGGGGCGTCCCGACGGAATCGACGCCTCTGTTGG
TCACGCCCTTGGTATCGGTTACATCATTAATCCCGGCGGGGAAGCTCGCA
GGCGCGGGAGAACCAGTGCCCTCAGCGACGGCAGCAGCAGATGGCGGCGC
CGGCCAAAGGAAGGAAGGAGTATTCACGAAGCCTCGCTGTGAATCATCAT
TCTCTTCCGCGGCGTCGAACCAAGAGGCACCACGGCGTCCGCCACAGCAG
GCGCTCGATGCGGACTTCCCCTTCTTTGAAGCGGACCCGAGGGATATCGA
GAAAGGGCGAGCCGAGTACTCTGTGACGATATCGTCTCAAAAGCTGGGGA
TGACGGTGGAGAACGTCTTGGAGCGTACCGTCGTGAGGGCGGCTGCGCCC
GGGGGTGGGGCGGAGGCGGCTGGCGTAGGGACGGGATCGCTTCTCGTTGC
GTTGGACGGACAGTCGACCAAGGCGAGCCGAGTACTCTGTGACGATATCG
TCTCAAAAGCTGGGGATGACGGTGGAGAACGTCTTGGAGCGTACCGTCGT
GAGGGCGGCTGCGCCCGGGGGTGGGGCGGAGGCGGCTGGCGTAGGGACGG
GATCGCTTCTCGTTGCGTTGGACGGACAGTCGACCAAGAACGCGTCGCAC
TTCGAGGTAATCGAGCTCCTCCGCATCGCGAATCGCCCGCTCACGCTGCG
GCTGCGGCGCGTCGCGAGAGAACGCCTCCTCAGCCGTCGCACCGAAATGA
GGGCTCTTACCCGCCCTTACGGGGTGATAGCCCCCGGCGGCGCTGTCGGG
GGCACGATGACGCACGACCAAGCGACAGCGGCGGCAGAGAGGAGTTCCCA
CCCGAAGGCGCGTCATTTGTCCCCGCCCCCACCTCCTCCGCCGCGAGGGC
TACACAACGCGTCGCACTTCGAGGTAATCGAGCTCCTCCGCATCGCGAAT
CGCCCGCTCACGCTGCGGCTGCGGCGCGTCGCGAGAGAACGCCTCCTCAG
CCGTCGCACCGAAATGAGGGCTCTTACCCGCCCTTACGGGGTGATAGCCC
CCGGCGGCGCTGTCGGGGGCACGATGACGCACGACCAAGCGACAGCGGCG
GCAGAGAGGAGTTCCCACCCGAAGGCGCGTCATTTGTCCCCGCCCCCACC
TCCTCCGCCGCGAGGGCTACAC
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