prot_H-elongata_contig86799.16238.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86799.16238.1
Unique Nameprot_H-elongata_contig86799.16238.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length97
Homology
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.640e-35
Identity = 73/97 (75.26%), Postives = 83/97 (85.57%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMKPK LT HE+GLLEYLEDIIGSDRFVEA EEA + V+ LN+QR EKLNRLK+AEKE+DSL+G K +A EFLRLDA IR+K N
Sbjct:  230 RFLILQGEVEQIAMMKPKGLTEHEDGLLEYLEDIIGSDRFVEAAEEAARRVEELNDQRTEKLNRLKLAEKEKDSLEGDKQKAYEFLRLDAAIRKKQN 326          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A7S3GYG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYG4_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.380e-31
Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMKPKALTPHEEGLLEYLEDIIGS++FVE   E  K +D + EQR EK+NRLK++EKERD+L G+K EA+ F+  +  IR + N
Sbjct:   13 RFLILQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSNKFVEPIAEVSKALDEIVEQRVEKVNRLKISEKERDNLSGSKLEAEAFIAKEKEIRREQN 109          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A6G0WSE3_9STRA (Structural maintenance of chromosomes protein 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 8.000e-29
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMK KA  PH+EGLLEYLEDIIGS+++VE TEEA+K V+A NE+R EKLNR+KV EKE+D+L+GAK EAQE+L  +  +  K N
Sbjct:  245 RFLILQGEVEQIAMMKSKADNPHDEGLLEYLEDIIGSNKYVEPTEEALKQVEAFNEERVEKLNRVKVVEKEKDNLEGAKAEAQEYLEKERDVYLKTN 341          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A485LJE1_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJE1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.030e-28
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMK KA  PH+EGLLEYLEDIIGS+++VE TEEA+K V+  NE+R EKLNR+KV EKE+D+L+GAK EAQE+L  +  +  K N
Sbjct:  254 RFLILQGEVEQIAMMKSKAENPHDEGLLEYLEDIIGSNKYVEPTEEALKQVETFNEERVEKLNRVKVVEKEKDNLEGAKAEAQEYLEKERDVYLKTN 350          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: UPI0003F08412 (structural maintenance of chromosomes protein 4-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08412)

HSP 1 Score: 115 bits (287), Expect = 9.580e-28
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQI+MMKPKALT HEEG+LEYLEDIIGS ++ E  EE  K V+ LNEQR EKLNR+KV EKE+D L+G K+EA  +L L+  I +K N
Sbjct:  220 RFLILQGEVEQISMMKPKALTEHEEGMLEYLEDIIGSSKYKEPIEELAKQVEELNEQRGEKLNRVKVVEKEKDELEGTKNEAMAYLLLENNISKKKN 316          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A7S6N1_NEMVE (Structural maintenance of chromosomes protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7S6N1_NEMVE)

HSP 1 Score: 113 bits (283), Expect = 3.320e-27
Identity = 60/97 (61.86%), Postives = 74/97 (76.29%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQI+MMKPKALT HE+G+LEYLEDIIGS R+ E  EE  K V+ LNE R EKLNR+K  EKE+D L+G+KDEA E++ ++  I  K N
Sbjct:  156 RFLILQGEVEQISMMKPKALTEHEDGMLEYLEDIIGSSRYKEPIEELAKEVEVLNEARGEKLNRVKAVEKEKDELEGSKDEAVEYINMENGITRKRN 252          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A7S2K8C5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2K8C5_9DINO)

HSP 1 Score: 110 bits (275), Expect = 4.770e-27
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDA 90
            RF+  QGEVEQI++MKPKALTPHE+GLLEYLEDIIGS+R VE  EEA  +V+ L EQR EKLNRL+VAE+ERD+L G + EA+ ++  +A
Sbjct:  172 RFLILQGEVEQISLMKPKALTPHEDGLLEYLEDIIGSNRLVEPIEEAEGVVEKLTEQRQEKLNRLRVAERERDALDGPRKEAEAWVTAEA 261          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A2R5GKU7_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKU7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.210e-27
Identity = 58/95 (61.05%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREK 95
            RF+  QGEVEQI++MKPKA +PHEEGLLEYLE+IIGS++++EA EEA K V+ L + R EKL R+KV EKE++SL+ AK+EA+EFL+ +A + +K
Sbjct:  185 RFLILQGEVEQISLMKPKAQSPHEEGLLEYLEEIIGSNKYLEAIEEATKSVEELTQSRTEKLGRVKVVEKEKESLEDAKNEAEEFLKKEAQLMQK 279          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A835YML7_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.580e-26
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMKPKA  PH+EGLLEYLEDIIGS+R VEATE A K V+  +E R E+LNRLK AEKE+++L+GAK EA+ FL+ +  +R+  N
Sbjct:  185 RFLILQGEVEQIAMMKPKAEGPHDEGLLEYLEDIIGSNRHVEATEAAAKEVEERSEARAERLNRLKAAEKEKEALEGAKSEAEAFLQKERDLRKLRN 281          
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Match: A0A418FLU1_9STRA (Structural maintenance of chromosomes protein 4 (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FLU1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.120e-26
Identity = 61/97 (62.89%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKMVDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN 97
            RF+  QGEVEQIAMMK KA  PH+EGLLEYLEDIIGS+++VE TEEA+K V++LNE R +KLNR+KV EKE+ +L+ AK EAQE+L  +  +  K N
Sbjct:  144 RFLILQGEVEQIAMMKSKADNPHDEGLLEYLEDIIGSNKYVEPTEEALKQVESLNEARVDKLNRVKVVEKEKGNLEDAKAEAQEYLEKERDVYVKTN 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86799.16238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ01_ECTSI3.640e-3575.26Structural maintenance of chromosomes protein n=2 ... [more]
A0A7S3GYG4_9STRA1.380e-3164.95Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A6G0WSE3_9STRA8.000e-2965.98Structural maintenance of chromosomes protein 4 n=... [more]
A0A485LJE1_9STRA2.030e-2864.95Structural maintenance of chromosomes protein n=1 ... [more]
UPI0003F084129.580e-2863.92structural maintenance of chromosomes protein 4-li... [more]
A7S6N1_NEMVE3.320e-2761.86Structural maintenance of chromosomes protein n=3 ... [more]
A0A7S2K8C5_9DINO4.770e-2765.56Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A2R5GKU7_9STRA6.210e-2761.05Structural maintenance of chromosomes protein n=1 ... [more]
A0A835YML7_9STRA1.580e-2663.92Structural maintenance of chromosomes protein n=1 ... [more]
A0A418FLU1_9STRA2.120e-2662.89Structural maintenance of chromosomes protein 4 (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..85
NoneNo IPR availableGENE3D3.40.50.300coord: 1..97
e-value: 2.8E-5
score: 25.9
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 1..90
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 1..90
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86799contigH-elongata_contig86799:1694..2279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86799.16238.1mRNA_H-elongata_contig86799.16238.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86799 1694..2279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86799.16238.1 ID=prot_H-elongata_contig86799.16238.1|Name=mRNA_H-elongata_contig86799.16238.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
RFVPFQGEVEQIAMMKPKALTPHEEGLLEYLEDIIGSDRFVEATEEAVKM
VDALNEQRNEKLNRLKVAEKERDSLKGAKDEAQEFLRLDAVIREKLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase