prot_H-elongata_contig121138.1623.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121138.1623.1
Unique Nameprot_H-elongata_contig121138.1623.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
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BLAST of mRNA_H-elongata_contig121138.1623.1 vs. uniprot
Match: D8LDB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB3_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 8.280e-33
Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 0 
Query:    1 IVPTSEALYAKEGEGISDVRIHRIQQEAPLLSFAMNWADGGGAGGNQDTADLVNIFLFAKQVDPPVNVELLVQKDRTNDNLAHFEVVMDWGPIGWDFYREGALSVCIQGARDAKHTDCGSYTVFGISFGEHGNVDA 136
            I+P +EA  A +G+GIS+V + R++Q    LSF++ W DGGGAGG +DTA  V+I+L A+Q DPP  VEL+V+++  ND L+H EV MDW  +GWD  R+G L  C+   +D  +  C  +  F        +VDA
Sbjct:  152 ILPEAEAPSATQGDGISNVDVPRVEQNGSYLSFSVTWGDGGGAGGFEDTAPFVDIWLVAEQSDPPAWVELVVEQNVENDMLSHQEVSMDWSMMGWDLTRDGQLQSCVYDTQDYDNYACSDFVSFAAMEETAADVDA 287
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121138.1623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDB3_ECTSI8.280e-3344.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121138contigH-elongata_contig121138:3..737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121138.1623.1mRNA_H-elongata_contig121138.1623.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121138 3..737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121138.1623.1 ID=prot_H-elongata_contig121138.1623.1|Name=mRNA_H-elongata_contig121138.1623.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
IVPTSEALYAKEGEGISDVRIHRIQQEAPLLSFAMNWADGGGAGGNQDTA
DLVNIFLFAKQVDPPVNVELLVQKDRTNDNLAHFEVVMDWGPIGWDFYRE
GALSVCIQGARDAKHTDCGSYTVFGISFGEHGNVDA
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