prot_H-elongata_contig86683.16226.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86683.16226.1
Unique Nameprot_H-elongata_contig86683.16226.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
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BLAST of mRNA_H-elongata_contig86683.16226.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 9.480e-40
Identity = 76/108 (70.37%), Postives = 88/108 (81.48%), Query Frame = 0 
Query:    1 MGEEASAWMSSSAQGMSLLQRAQRHVFVMNPELVAQHGDAVKLVVRSAPSQEGTPLGELTCRGRVNCVGARGPWLRVLYQGFREAWMLSQTDT-LQLLVPASSSDGDG 107
            MG+ ASAWMSSSAQGM LL+ A+R VF+M+P L A+HGDAVKL VR+APSQ+G PLGE+T +GRV C+  RGPWLRVLY G REAWMLSQT T +QLLVPA S  G G
Sbjct:  216 MGDAASAWMSSSAQGMPLLKPARRDVFIMDPALAAKHGDAVKLAVRAAPSQDGAPLGEITSKGRVYCLATRGPWLRVLYHGHREAWMLSQTPTEVQLLVPADSVAGGG 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86683.16226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7L6_ECTSI9.480e-4070.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86683contigH-elongata_contig86683:531..2064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86683.16226.1mRNA_H-elongata_contig86683.16226.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86683 101..2702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86683.16226.1 ID=prot_H-elongata_contig86683.16226.1|Name=mRNA_H-elongata_contig86683.16226.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
MGEEASAWMSSSAQGMSLLQRAQRHVFVMNPELVAQHGDAVKLVVRSAPS
QEGTPLGELTCRGRVNCVGARGPWLRVLYQGFREAWMLSQTDTLQLLVPA
SSSDGDGPSPVNFEERTQAPPEESAMALQGDGNR*
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