mRNA_H-elongata_contig8651.16214.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8651.16214.1
Unique NamemRNA_H-elongata_contig8651.16214.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: D8LR48_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR48_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 4.880e-123
Identity = 193/246 (78.46%), Postives = 214/246 (86.99%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYDL+WRETM ELNEQVHIEDNTL++AE DEP     QATI+EAFQHFACLYIKYVQIFKRLE CYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPN D+RF PPA E+AFPWDYVNLDDILVDLKLSPDTLD+AVPR    D A EITARD LV+GY KLKLN    + LDDK+D  +   +++++KA+EI+QRNERGRQGKQRALLLKELR EEK+RRIYDA DQLE+DPE AAA+IQ
Sbjct:    5 TYDLVWRETMAELNEQVHIEDNTLNVAEGDEPXXXXXQATIMEAFQHFACLYIKYVQIFKRLEMCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNADMRFPPPAPEQAFPWDYVNLDDILVDLKLSPDTLDVAVPRYFKQDVAVEITARDTLVKGYIKLKLNTADGLPLDDKEDPDSAAGEMTLDKALEIIQRNERGRQGKQRALLLKELREEEKKRRIYDATDQLEMDPEIAAANIQ 250
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A835Z194_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z194_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.210e-98
Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYD MWRETM EL+EQVHIEDN+LD+A+ D       +ATI+EAFQHFACLYIKY+QI +RLE C+DAMVHPQKR+DVKMVLELV RRV+ELKH LVKWNPPN D+R  PP  EEAFPW+YVNLDDILVDLKL P+TLD+ VPR    D+A+EI ARDKLV      + NG    S             +++++A++++QRNERGRQG+QRALL+K+LR EEKRR +YD+ DQ+E+D E AAA+IQ
Sbjct:    5 TYDAMWRETMAELDEQVHIEDNSLDVADGDPXXXXXXKATIVEAFQHFACLYIKYLQIMRRLEACHDAMVHPQKRMDVKMVLELVTRRVIELKHALVKWNPPNGDVRLPPPMPEEAFPWEYVNLDDILVDLKLPPETLDVPVPRYFREDNAEEIEARDKLV--VLLEEGNGTTLQST------------MTVDQALDVIQRNERGRQGRQRALLVKDLREEEKRRHMYDSADQVEMDAEIAAANIQ 236
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A835Z665_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z665_9STRA)

HSP 1 Score: 299 bits (766), Expect = 3.110e-92
Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYD MWRETM EL+EQVHIEDN+LD+A+ D       +ATI+EAFQHFACLYIKY+QI +RLE C+DAMVHPQKR+DVKMVLELV RRV+ELKH LVKWNPPN D+R  PP  EEAFPW+YVNLDDILVDLKL P+TLD+ VPR    D+A+EI ARDKLV      + NG    S             +++++A++++QRNERGRQG+QRALL+K+LR EEKRR +YD+ DQ+E+D E AAA+IQ
Sbjct:    5 TYDAMWRETMAELDEQVHIEDNSLDVADGDPXXXXXXKATIVEAFQHFACLYIKYLQIMRRLEACHDAMVHPQKRMDVKMVLELVTRRVIELKHALVKWNPPNGDVRLPPPMPEEAFPWEYVNLDDILVDLKLPPETLDVPVPRYFREDNAEEIEARDKLV--VLLEEGNGTTLQST------------MTVDQALDVIQRNERGRQGRQRALLVKDLREEEKRRHMYDSADQVEMDAEIAAANIQ 236
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A067D3Y6_SAPPC (AAA domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D3Y6_SAPPC)

HSP 1 Score: 290 bits (742), Expect = 8.770e-89
Identity = 150/246 (60.98%), Postives = 188/246 (76.42%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            T+D  W+  M ELNEQVHIED+TLD  E  E   PPP  ++LEAFQH+ACLYIKYVQIF  LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN D+R +P   E+ FPW+YVNLDD+LVDLKL P  L++ VPR    DS+ E+  RD+LV+GY KLKL G+  + +DD D S +    +S+++A++I+QRNERGRQG+QR LL+ ELR EEK+RRIYD     E+DPE AAA+IQ
Sbjct:    5 TFDTKWQSAMTELNEQVHIEDHTLDAEEGQEV-QPPPDVSMLEAFQHYACLYIKYVQIFTTLEECYDQMVHPQKRIDVKKIMELVMTRVVELKHDLVKWNPPNPDVRTTP---EQNFPWEYVNLDDLLVDLKLPPSLLEVPVPRYFVEDSSAELKKRDRLVKGYMKLKL-GVEALYIDDSDASVSLADAMSLDEALQIIQRNERGRQGRQRGLLVHELREEEKQRRIYDNTQTPEMDPELAAANIQ 245
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A8K1C8E9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8E9_PYTOL)

HSP 1 Score: 285 bits (729), Expect = 9.170e-87
Identity = 149/248 (60.08%), Postives = 190/248 (76.61%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPA--PPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYD  W+E M ELNEQVHIED+TL  A+  EP     PPQA+I+EAFQH+ACLYIKY+QI  RL  CYD MVHPQKRIDVK V+E+V  R++ELKH LVKWNPPN D+R +P   E +FPW+YVNLDDILVDLKL P+TL++ VP+    D A+E+  R++LV+GY KLK +G+  + LD  +D  A    +S+++AI I+QRNERGRQG+QR LL++ELR EEK+RRIY+A    E+DP+ AAA+IQ
Sbjct:    5 TYDRRWQEAMAELNEQVHIEDHTLS-ADGQEPGTVEAPPQASIVEAFQHYACLYIKYIQILTRLSECYDQMVHPQKRIDVKQVMEVVTTRIVELKHALVKWNPPNPDVRTNP---ERSFPWEYVNLDDILVDLKLPPETLEVPVPKSFLDDQAEELLRRERLVKGYMKLK-HGVDVIYLDSMEDPLALHDALSLDEAIAIIQRNERGRQGRQRGLLVQELREEEKQRRIYEAAQTPEMDPDIAAANIQ 247
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A6G0XPD9_9STRA (AAA domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XPD9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.100e-86
Identity = 142/246 (57.72%), Postives = 191/246 (77.64%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            T+D  W+  M ELNEQVHIED+TLD+ E  +   PPP+ ++LEAFQH+ACLYIKYVQIF  LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN D+R +P   E  FPW+YVNLDD+LVDLKL P+ L++ VP+    D++ E+  RD+LV+GY KLKL G+  V ++  +++ +    +++++AI+++QRNERGRQGKQR  L++ELR EEK+RR+YD+    E+DPE AAA+IQ
Sbjct:    5 TFDSKWQSAMTELNEQVHIEDHTLDVEEGQDV-QPPPEVSMLEAFQHYACLYIKYVQIFANLEECYDQMVHPQKRIDVKQIMELVMTRVVELKHDLVKWNPPNPDVRTTP---ERNFPWEYVNLDDLLVDLKLPPNLLEVPVPKYFVEDNSTELKKRDRLVKGYMKLKL-GVESVPVEVVEENVSITDTMTLDEAIQVIQRNERGRQGKQRGALVRELREEEKQRRLYDSAQTPEMDPELAAANIQ 245
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A024URR3_9STRA (AAA domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024URR3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 7.630e-86
Identity = 142/246 (57.72%), Postives = 189/246 (76.83%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYD  W+  M ELNEQVHIED+TLD+ +  E   PPP+ ++LEAFQH+ACLYIKYVQIF  LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN D+R +P   E  FPW+YVNLDD+LVDLKL P  L++ VP+    DS+ ++  RD+LV+GY KLKL G+  + ++  ++S +    +++++AI+++QRNERGRQGKQR  L++ELR EEK+RR+YD     E++PE AAA+IQ
Sbjct:    5 TYDTKWQSAMTELNEQVHIEDHTLDVEDGQEA-TPPPEVSMLEAFQHYACLYIKYVQIFANLEECYDQMVHPQKRIDVKQIMELVMTRVVELKHDLVKWNPPNPDVRTTP---ERNFPWEYVNLDDLLVDLKLPPSLLEVPVPKYFVEDSSADLKKRDRLVKGYMKLKL-GVDTLPVEVAEESVSLADTMTLDEAIQVIQRNERGRQGKQRGALVRELREEEKQRRLYDNAQTPEMEPELAAANIQ 245
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A1V9Z5F7_9STRA (IQ and AAA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5F7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 3.490e-84
Identity = 145/246 (58.94%), Postives = 189/246 (76.83%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            T+D  W+  M ELNEQVHIED+TLD  E  E   PPP+ ++LEAFQH+ACLYIKYVQIF  LE CYD MVHPQKRIDVK ++ELV+ RV+ELKH+LVKWNPPN D+R +P   E+ FPW+YVNLDD+LVDLKL P  L++ VP+    D++ E+  RD+LV+GY KLKL G+  + ++D + S +    +S+++A++I+QRNERGRQG+QR +L+ ELR EEK+RRIYD     E+DPE AAA+IQ
Sbjct:  830 TFDTKWQSAMTELNEQVHIEDHTLDAEEGQEV-QPPPEVSMLEAFQHYACLYIKYVQIFTTLEECYDQMVHPQKRIDVKRIMELVMTRVVELKHDLVKWNPPNPDVRTTP---EQNFPWEYVNLDDLLVDLKLPPSLLEVPVPKYFVEDNSVELKKRDRLVKGYMKLKL-GVEALYVEDTETSVSMADAMSLDEALQIIQRNERGRQGRQRGILVYELREEEKQRRIYDNTQTPEMDPELAAANIQ 1070
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A5D6Y8C7_9STRA (WW domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C7_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.070e-82
Identity = 144/247 (58.30%), Postives = 189/247 (76.52%), Query Frame = 1 
Query:    1 TYDLMWRETMIELNEQVHIEDNTLDIAESDEPP-APPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            TYD  W+E M ELNEQVHIED+TL     D  P   PPQA+I+EAFQH+ACLYIKY+QI KRL  CYD MVHPQKRIDVK V+E+V  R++ELKH+LVKWNPPN D++  P   E +FPW+YVNLDDILVDLKL P+TL+I VP+    + A+E+  R++LV+GY KLK +G+  + LD  ++  +    +SI++AI ++QRNERGRQGKQR +L+KELR EEK+R++Y++    E+DP+ AAA+IQ
Sbjct:    4 TYDRRWQEAMAELNEQVHIEDHTLSAEGQDATPNEAPPQASIVEAFQHYACLYIKYIQILKRLADCYDQMVHPQKRIDVKQVMEVVTTRIVELKHDLVKWNPPNPDVQTQP---ERSFPWEYVNLDDILVDLKLPPETLEIPVPKSFADEHAEELLRRERLVKGYMKLK-HGVDMIYLDSNEEQLSIAGAMSIDEAIAVLQRNERGRQGKQRGVLVKELREEEKQRKLYESAQAPEMDPDIAAANIQ 246
[Close]
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Match: A0A2D4C1R8_PYTIN (AAA domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R8_PYTIN)

HSP 1 Score: 267 bits (683), Expect = 3.370e-80
Identity = 142/239 (59.41%), Postives = 184/239 (76.99%), Query Frame = 1 
Query:   28 MIELNEQVHIEDNTLDIAESDEPPA--PPPQATILEAFQHFACLYIKYVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNVDLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEITARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNERGRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQ 738
            M ELNEQVHIED+TL  A+  +P +   PPQA+I+EAFQH+ACLYIKY+QI KRL  CYD MVHPQKRIDVK VLE+V  R++ELKH+LVKWNPPN D+   P   E +FPW+YVNLDDILVDLKL P+T++I VPR    D ++E+  R++LV+GY KLK +G+  + LD  +D  A    +S+++AI I+QRNERGRQG+QR  L++ELR EEK+R+IY+A    E+DP+ AAA+IQ
Sbjct:    1 MAELNEQVHIEDHTL-AADGQDPSSIEAPPQASIVEAFQHYACLYIKYIQILKRLADCYDQMVHPQKRIDVKQVLEVVTTRIVELKHDLVKWNPPNPDVATVP---ERSFPWEYVNLDDILVDLKLPPETIEIPVPRSFVDDQSEELLRRERLVKGYMKLK-HGVDAIXLDALEDPLALHDAMSLDEAIAILQRNERGRQGRQRGTLVQELREEEKQRKIYEAAPAPEMDPDIAAANIQ 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8651.16214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR48_ECTSI4.880e-12378.46Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A835Z194_9STRA1.210e-9863.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z665_9STRA3.110e-9263.41AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A067D3Y6_SAPPC8.770e-8960.98AAA domain-containing protein n=3 Tax=Saprolegniac... [more]
A0A8K1C8E9_PYTOL9.170e-8760.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XPD9_9STRA4.100e-8657.72AAA domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A024URR3_9STRA7.630e-8657.72AAA domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A1V9Z5F7_9STRA3.490e-8458.94IQ and AAA domain-containing protein n=1 Tax=Thrau... [more]
A0A5D6Y8C7_9STRA1.070e-8258.30WW domain-containing protein n=1 Tax=Pythium brass... [more]
A0A2D4C1R8_PYTIN3.370e-8059.41AAA domain-containing protein n=2 Tax=Pythium insi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8651contigH-elongata_contig8651:476..2750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score377.1
Seed ortholog evalue6.4e-102
Seed eggNOG ortholog2880.D8LR48
EggNOG free text desc.Belongs to the AAA ATPase family
EggNOG OGsCOG0464@1,KOG0740@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-06_004370.1
Exons5
Model size759
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8651.16214.1prot_H-elongata_contig8651.16214.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8651 476..2738 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931266.6210506-CDS-H-elongata_contig8651:475..6521622931266.6210506-CDS-H-elongata_contig8651:475..652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 476..652 -
1691679766.0739233-CDS-H-elongata_contig8651:475..6521691679766.0739233-CDS-H-elongata_contig8651:475..652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 476..652 -
1622931266.6371362-CDS-H-elongata_contig8651:1018..11561622931266.6371362-CDS-H-elongata_contig8651:1018..1156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1019..1156 -
1691679766.08385-CDS-H-elongata_contig8651:1018..11561691679766.08385-CDS-H-elongata_contig8651:1018..1156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1019..1156 -
1622931266.649685-CDS-H-elongata_contig8651:1345..15521622931266.649685-CDS-H-elongata_contig8651:1345..1552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1346..1552 -
1691679766.0918496-CDS-H-elongata_contig8651:1345..15521691679766.0918496-CDS-H-elongata_contig8651:1345..1552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1346..1552 -
1622931266.6662445-CDS-H-elongata_contig8651:1816..20051622931266.6662445-CDS-H-elongata_contig8651:1816..2005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1817..2005 -
1691679766.0997927-CDS-H-elongata_contig8651:1816..20051691679766.0997927-CDS-H-elongata_contig8651:1816..2005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 1817..2005 -
1622931266.6825771-CDS-H-elongata_contig8651:2702..27381622931266.6825771-CDS-H-elongata_contig8651:2702..2738Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 2703..2738 -
1691679766.107731-CDS-H-elongata_contig8651:2702..27381691679766.107731-CDS-H-elongata_contig8651:2702..2738Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8651 2703..2738 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931266.6973581-UTR-H-elongata_contig8651:2738..27501622931266.6973581-UTR-H-elongata_contig8651:2738..2750Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8651 2739..2750 -
1691679766.1154294-UTR-H-elongata_contig8651:2738..27501691679766.1154294-UTR-H-elongata_contig8651:2738..2750Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8651 2739..2750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8651.16214.1

>prot_H-elongata_contig8651.16214.1 ID=prot_H-elongata_contig8651.16214.1|Name=mRNA_H-elongata_contig8651.16214.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
MWRETMIELNEQVHIEDNTLDIAESDEPPAPPPQATILEAFQHFACLYIK
YVQIFKRLETCYDAMVHPQKRIDVKMVLELVIRRVLELKHELVKWNPPNV
DLRFSPPAAEEAFPWDYVNLDDILVDLKLSPDTLDIAVPRQVFSDSAKEI
TARDKLVRGYAKLKLNGMAEVSLDDKDDSQAGFQDISIEKAIEIVQRNER
GRQGKQRALLLKELRAEEKRRRIYDANDQLELDPETAAASIQVHAPLP*
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mRNA from alignment at H-elongata_contig8651:476..2750-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8651.16214.1 ID=mRNA_H-elongata_contig8651.16214.1|Name=mRNA_H-elongata_contig8651.16214.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2275bp|location=Sequence derived from alignment at H-elongata_contig8651:476..2750- (Himanthalia elongata Himel1 dioecious)
ACCTATGACCTGATGTGGCGGGAAACGATGATTGAGCTCAACGAGCAGGT
GAATAAACAAAATAGTACCATGCGTCTAATCATGTTCTCGAAGTACGGAT
GAAGGACGGACACATCAACCACGAATAGCTCCAGAGACGTTGTGGCATAG
CCATCTACTACGCCAGAAATCTGCATGCATGTTTTCCAAACGCAATGTGT
TTGACATTATTGAGGTTAGATCACAGTCGTAACGCCGGCATCTTATTGTT
GGGCAAAACCTGTGAGTTGCCGGCACCAAAAAAAAATAGACACGGTACCA
CCTGTACAACGGATATGATGCGGATATTTTAGGAAATTGGTTTATGAGGT
TCATTGGGCAATAATATATTTTTCGCTTACGATGCTTCTCATGAAGTACA
ATGCCCTCATTTAGGAGATGTCACTTGATCTATCCGTCGCCGGAAAGTAA
CATTTACCCGAGAGAGTTGTTGCGCCGATCTTGCCCATTCTACATAATTT
CTTGCGTCCAATATTATTTACTGTAAAAAAACTGCTCATGGAACTGTCGT
CACGTACAATACGAACCCGAAATCGATCTACCACAAGACTACCACAAGAA
GTTTGCCTTGAACAACTAAAAACATTGTTAAGACAGGGATCACGCTGTAC
ACCCTGGATGATCGATTTCGTACAATACGTGAACCAGCGGCACACTGAAT
CCTACTATTTTCGGCCTTGCCACGAGTTTTCATATCATGACGCAGGTGCA
TATTGAGGATAATACGCTGGACATAGCTGAGAGTGACGAGCCCCCTGCTC
CACCCCCGCAAGCTACGATCCTTGAAGCCTTCCAGCACTTCGCCTGCCTG
TACATCAAATACGTTCAGATCTTCAAGAGACTGGAAACGTGCTACGACGC
TATGGTTCACCCGCAAAAGCGAATAGACGTGAAGGTACTACAGAGTGCGT
GGGGATTTTGCAGCCTGCAACACGAAGTGGAAATACTGAGTTCTTGCGAG
AACCGAGCGCTGATTTCCGCTGAAGAACTACAAGGAATGCAAAACCATTG
AACATTAATACTATTATATTGGTTGCTCTCGAACAACATGTTATCAAGGA
GCCCCCGAAAATGGTTATTGGGCGACTCGCTCAGAAACACCGAAATAGTT
TTATTTTGGCCCGAAACACCTTTTGTATCGCAACGTATCGGGCGATAGAT
GGTCCTCGAGCTGGTTATTCGACGGGTCCTCGAGCTCAAGCATGAACTGG
TAAAATGGAACCCGCCCAACGTAGACCTGCGCTTTTCGCCTCCGGCCGCA
GAAGAAGCATTTCCTTGGGACTATGTCAATCTCGACGACATCCTTGTGGA
TTTGAAACTATCGCCTGATACGCTCGACATCGCGGTACCTAGGCAAGTTT
TTTCCGTCCGCAAAATGTATCAACTACGAGTACGTTGCTTTCAAAGTTTA
GACGGTGATTCCAGTTATCATTTAGGTGGTAAGATAGCGCTGATGCTGAT
GATGCTTGAAGAGGAGAGAAGACCCGAGCGACCCCTGGCAAAAATATGTA
CTCAATGCTCGTTTCGGCTACTTTTGGCCAGATACTTCAAGCAGGACAGT
GCCAAAGAGATCACCGCTCGAGATAAGCTTGTAAGAGGTTATGCAAAGCT
TAAGCTCAACGGAATGGCAGAGGTTTCGCTGGATGACAAGGACGATTCTC
AAGCGGGTTTCCAAGACATATCGATCGAGAAGGTGACGAACTCGCGATTC
GATCCACCGAGAAAAAAAAAACCCCATAGACTGAGCGTGTACGCGAGTTC
GTCAGCGCGCGAAAGTAGATCATGCAGAAAACCCCACGATATGTCATGAG
GGGAGGTCATCCATGAGGCGAGAAAATGATGTTCAGGTCTAGATTAATCG
AGGGTCCGTCATGGAGATCAAGGCAAAAACGAGAATCATCCTCGCGTAAC
TACTTCAACCCCCGTGTAACCGAATAAGGCCCGACAGAGGATGGCATGAA
AATATAGTATAATATATACTCCTTATATATATATATTATGAATAGTTGAA
GGTAGATTAAGCAGCCCCAATGATACCACAAACCACTGACTTGCGCAGGC
GATCGAAATTGTTCAGAGAAACGAACGTGGTAGACAAGGTAAGCAGAGAG
CCTTACTGCTAAAGGAGCTAAGAGCGGAGGAAAAACGACGGCGGATCTAC
GACGCAAACGATCAACTTGAACTGGACCCAGAGACTGCGGCGGCGAGCAT
ACAGGTTCACGCTCCATTGCCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig8651:476..2750-

>mRNA_H-elongata_contig8651.16214.1 ID=mRNA_H-elongata_contig8651.16214.1|Name=mRNA_H-elongata_contig8651.16214.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1494bp|location=Sequence derived from alignment at H-elongata_contig8651:476..2750- (Himanthalia elongata Himel1 dioecious)
ATGTGGCGGGAAACGATGATTGAGCTCAACGAGCAGATGTGGCGGGAAAC
GATGATTGAGCTCAACGAGCAGGTGCATATTGAGGATAATACGCTGGACA
TAGCTGAGAGTGACGAGCCCCCTGCTCCACCCCCGCAAGCTACGATCCTT
GAAGCCTTCCAGCACTTCGCCTGCCTGTACATCAAATACGTTCAGATCTT
CAAGAGACTGGAAACGTGCTACGACGCTATGGTTCACCCGCAAAAGCGAA
TAGACGTGAAGGTGCATATTGAGGATAATACGCTGGACATAGCTGAGAGT
GACGAGCCCCCTGCTCCACCCCCGCAAGCTACGATCCTTGAAGCCTTCCA
GCACTTCGCCTGCCTGTACATCAAATACGTTCAGATCTTCAAGAGACTGG
AAACGTGCTACGACGCTATGGTTCACCCGCAAAAGCGAATAGACGTGAAG
ATGGTCCTCGAGCTGGTTATTCGACGGGTCCTCGAGCTCAAGCATGAACT
GGTAAAATGGAACCCGCCCAACGTAGACCTGCGCTTTTCGCCTCCGGCCG
CAGAAGAAGCATTTCCTTGGGACTATGTCAATCTCGACGACATCCTTGTG
GATTTGAAACTATCGCCTGATACGCTCGACATCGCGGTACCTAGGCAAGT
TTTTTCCATGGTCCTCGAGCTGGTTATTCGACGGGTCCTCGAGCTCAAGC
ATGAACTGGTAAAATGGAACCCGCCCAACGTAGACCTGCGCTTTTCGCCT
CCGGCCGCAGAAGAAGCATTTCCTTGGGACTATGTCAATCTCGACGACAT
CCTTGTGGATTTGAAACTATCGCCTGATACGCTCGACATCGCGGTACCTA
GGCAAGTTTTTTCCGACAGTGCCAAAGAGATCACCGCTCGAGATAAGCTT
GTAAGAGGTTATGCAAAGCTTAAGCTCAACGGAATGGCAGAGGTTTCGCT
GGATGACAAGGACGATTCTCAAGCGGGTTTCCAAGACATATCGATCGAGA
AGGACAGTGCCAAAGAGATCACCGCTCGAGATAAGCTTGTAAGAGGTTAT
GCAAAGCTTAAGCTCAACGGAATGGCAGAGGTTTCGCTGGATGACAAGGA
CGATTCTCAAGCGGGTTTCCAAGACATATCGATCGAGAAGGCGATCGAAA
TTGTTCAGAGAAACGAACGTGGTAGACAAGGTAAGCAGAGAGCCTTACTG
CTAAAGGAGCTAAGAGCGGAGGAAAAACGACGGCGGATCTACGACGCAAA
CGATCAACTTGAACTGGACCCAGAGACTGCGGCGGCGAGCATACAGGTTC
ACGCTCCATTGCCTTGAGCGATCGAAATTGTTCAGAGAAACGAACGTGGT
AGACAAGGTAAGCAGAGAGCCTTACTGCTAAAGGAGCTAAGAGCGGAGGA
AAAACGACGGCGGATCTACGACGCAAACGATCAACTTGAACTGGACCCAG
AGACTGCGGCGGCGAGCATACAGGTTCACGCTCCATTGCCTTGA
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