prot_H-elongata_contig86415.16206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig86415.16206.1
Unique Name	prot_H-elongata_contig86415.16206.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	81

Homology

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BLAST of mRNA_H-elongata_contig86415.16206.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 3.820e-16
Identity = 50/90 (55.56%), Postives = 56/90 (62.22%), Query Frame = 0

Query:    3 DRDGLLGTIEAQERDIDDLKKSVYELSYMLSMQGSASLAAGNL----------AQTDAG-TRSSGRAVFDPRVGLTGGRLDSLNLVDEEG 81
            +RD L GTIEAQERDID+LKKSVYELSYMLSMQGSA  A  +           A T    T    R VFDPRVG+    LDSL L++  G
Sbjct:   24 ERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLXXXXXXXXAATGGNVTGPPSRKVFDPRVGIATAHLDSLGLMNGGG 113

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BLAST of mRNA_H-elongata_contig86415.16206.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 5.200e-16
Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 0

Query:    3 DRDGLLGTIEAQERDIDDLKKSVYELSYMLSMQGSASLAAGNLAQTDAGTR---SSG--------RAVFDPRVGLTGGRLDSLNLVDEEG 81
            +RD L GTIEAQERDID+LKKSVYELSYMLSMQGSA  A  + +   A  R   S+G        R VFDPRVGL    LD+L L++  G
Sbjct:   24 ERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLAPAAARPGASTGGNVTGPPSREVFDPRVGLATAHLDALGLMNGGG 113

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig86415.16206.1 vs. uniprot

BLAST of mRNA_H-elongata_contig86415.16206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIJ7_ECTSI	3.820e-16	55.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KNQ7_9PHAE	5.200e-16	56.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig86415	contig	H-elongata_contig86415:841..1943 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig86415.16206.1	mRNA_H-elongata_contig86415.16206.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig86415 841..1943 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig86415.16206.1 ID=prot_H-elongata_contig86415.16206.1|Name=mRNA_H-elongata_contig86415.16206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MLDRDGLLGTIEAQERDIDDLKKSVYELSYMLSMQGSASLAAGNLAQTDA
GTRSSGRAVFDPRVGLTGGRLDSLNLVDEEG