prot_H-elongata_contig12111.1620.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12111.1620.1
Unique Nameprot_H-elongata_contig12111.1620.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A6H5KNW1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW1_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 5.530e-69
Identity = 110/131 (83.97%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            GDEDEID DV+AEMDRVA GGAD DVVKV+ LRKVYP   GAKVAVK+TSLGIPRGECFGLLG+NGAGKSSTLAILSGE+P T GSAYLSGF+V +NP+EIHRLVGYCPQFDALFE LTGREHL LYA+IK
Sbjct:   57 GDEDEIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 187          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 4.170e-65
Identity = 111/131 (84.73%), Postives = 120/131 (91.60%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            GDEDEIDEDV+AEMDRVA GGAD DVVKV+ LRKVYP   GAKVAVK+TSLGIPRGECFGLLG+NGAGKSSTLAILSGE+P T GSAYLSGF+V +NP+EIHRLVGYCPQFDALFE LTGREHL LYA+IK
Sbjct: 1519 GDEDEIDEDVRAEMDRVAGGGADNDVVKVKGLRKVYPASGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIK 1649          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.120e-63
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            GDED IDEDV+AEMDRVA G AD DVVKV  LRKVYP+ NGAKVAVK+TSLGIPRGECFGLLG+NGAGKSSTLAILSGE+P T GSA L GF+V +NP+EIHRLVGYCPQFDALFE LTGREHL LYAAIK
Sbjct:  622 GDEDNIDEDVRAEMDRVATGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIK 752          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 1.100e-62
Identity = 108/131 (82.44%), Postives = 117/131 (89.31%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            GDED ID+DV+AEMDRVA G AD DVVKV  LRKVYP+ NGAKVAVK+TSLGIPRGECFGLLG+NGAGKSSTLAILSGE+P T GSA L GF+V +NP+EIHRLVGYCPQFDALFE LTGREHL LYAAIK
Sbjct: 1539 GDEDNIDKDVRAEMDRVAAGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIK 1669          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A6H5JVX0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX0_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.930e-52
Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            G+ D +DEDV  E +RV  GG DGD VK++ + KVYP   GAKVAVK+TSLGIP+G+CFGLLG+NGAGKSS L+ILSG +PAT G+A L G +V + P+ IHRL+GYCPQFDALFE LTGREHL LYAAIK
Sbjct:  122 GEGDVLDEDVAREAERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIK 252          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.450e-50
Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = 0
Query:    1 GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            G+ D +DEDV  E +RV  GG DGD VK++ + KVYP   GAKVAVK+TSLGIP+G+CFGLLG+NGAGKSS L+ILSG +PAT G+A L G +V + P+ IHRL+GYCPQFDALFE LTGREHL LYAAIK
Sbjct: 1541 GEGDVLDEDVARETERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIK 1671          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.800e-45
Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 0
Query:    7 DEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            DEDV AE +RV +GGADGDVV ++ LRKV+P   G KVAV+  S GIPRGECFG LG+NGAGKS+TL+ILSGE P T G+AY++GF++  N  +I R +GYCPQFDAL E+LT REHL LYA IK
Sbjct:  576 DEDVAAEANRVLDGGADGDVVCLRQLRKVFPTPVGPKVAVRKLSFGIPRGECFGFLGINGAGKSTTLSILSGEFPPTSGTAYIAGFDIQHNQGKIRRRIGYCPQFDALLELLTVREHLELYARIK 700          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA)

HSP 1 Score: 164 bits (414), Expect = 3.060e-44
Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 0
Query:    1 GDEDEI-DEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            GD  E+ D DV AE +RVA GGAD DVV+++ LRKV+P   G KVAVK+ S GIPRGECFG LG+NGAGKS+TLAILSGE P T G+A+++GF++  +   I R +GYCPQFDAL E+LT  EHL LYA IK
Sbjct:  949 GDASEVEDTDVAAEAERVAGGGADDDVVRLERLRKVFPTPVGPKVAVKHMSFGIPRGECFGFLGINGAGKSTTLAILSGEFPPTSGTAFIAGFDIQADQSRIRRRIGYCPQFDALLELLTVSEHLELYARIK 1080          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 162 bits (411), Expect = 7.900e-44
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    5 EIDEDVKAEMDRVANGGADGDVVKVQNLRKVYP---IRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            E+D DV  E DRV  GGA+GDV+++  +RK +P      G K AV+  SLGIPRG+CFGLLG+NGAGK++TL ILSGE P T G+A+L+G N+  NP+E HRL+GYCPQFDA+F  LTGRE+L LY  +K
Sbjct: 1532 EVDADVAEEEDRVLGGGAEGDVIRIHRIRKAFPDGPCGRGYKEAVRGLSLGIPRGQCFGLLGINGAGKTTTLTILSGEQPPTEGAAFLAGLNIAENPEEAHRLIGYCPQFDAIFGSLTGRENLWLYGRLK 1661          
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Match: A0A2P4YAL6_9STRA (ABC transporter lipid exporter ABCA1 family (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAL6_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.360e-43
Identity = 77/127 (60.63%), Postives = 99/127 (77.95%), Query Frame = 0
Query:    5 EIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTSLGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQEIHRLVGYCPQFDALFEMLTGREHLMLYAAIK 131
            +IDEDVK E DRVA+GGADGD VK+  LRKVYP   G KVAV++ S G+ RGECFG LG+NGAGK++T+ +L+G++P + G+A L GFN+     E+ R +GYCPQFDALF++LT REHL L+ AIK
Sbjct:  150 DIDEDVKKEADRVASGGADGDAVKLMGLRKVYP---GGKVAVRDLSFGLQRGECFGFLGINGAGKTTTMKMLTGDVPPSSGTATLGGFNILTEQIEVRRQIGYCPQFDALFDLLTVREHLELFGAIK 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12111.1620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNW1_9PHAE5.530e-6983.97ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE8_ECTSI4.170e-6584.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE1.120e-6383.21ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE9_ECTSI1.100e-6282.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVX0_9PHAE5.930e-5267.94ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZA6_ECTSI1.450e-5067.94ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A7R9U9S9_9STRA1.800e-4565.60Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UE30_9STRA3.060e-4462.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XYR3_HETAK7.900e-4459.23Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2P4YAL6_9STRA2.360e-4360.63ABC transporter lipid exporter ABCA1 family (Fragm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 15..132
e-value: 1.1E-25
score: 92.5
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 46..123
e-value: 2.0E-12
score: 47.8
IPR026082ABC transporter APANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAcoord: 8..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 26..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12111contigH-elongata_contig12111:1366..2344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12111.1620.1mRNA_H-elongata_contig12111.1620.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12111 1366..2344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12111.1620.1 ID=prot_H-elongata_contig12111.1620.1|Name=mRNA_H-elongata_contig12111.1620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
GDEDEIDEDVKAEMDRVANGGADGDVVKVQNLRKVYPIRNGAKVAVKNTS
LGIPRGECFGLLGVNGAGKSSTLAILSGEMPATLGSAYLSGFNVNRNPQE
IHRLVGYCPQFDALFEMLTGREHLMLYAAIKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR026082ABCA
IPR027417P-loop_NTPase