mRNA_H-elongata_contig86384.16205.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: D8LRY5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY5_ECTSI) HSP 1 Score: 448 bits (1152), Expect = 5.780e-134 Identity = 322/742 (43.40%), Postives = 404/742 (54.45%), Query Frame = 1
Query: 127 AKAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFGEDDSSDEGGDEGKEVSVS-SKTEGFSSLLASQAAGWKCKACLVSNPESAVECLSCETVNSGGEGKISA-----GSKSISTSSSSPAFGLTFGTGKSTCGFKLSLSSGSATALSSVAEISETDATGGFKFGGP-PAGESVEIAPVIYSTAGG----------FLFGVSDAIGSASVGPSLVTAPPVEQPSALTRNTDEDLREVAQQSGDGSDEGNLDDVDDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGGEGQEISVS-SKTEGFSILLASQAAGWKCKACLVSNPESAVECLSCETVKPGDEGKITTGSKGSSASSWSPSFGLSFGTTKVTSAFKVGSSSGSATALSSVAGSSETDASGGFMFGGP---------PAGKSVTIAQVANPTAGGFLFDVSDATVSASAALSLATAPPGKQPSAFVRNTD-----------------FAQDSRDGSDEDSLRAFESSGGVSGDGXXXXXXXXXXXXXXXXXXXXXAKAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICRENRLERDAFLTWYDDWLFGEDDLSDEGGEGKE--ISVSSKTEGFSSLLASQAAGWKCKACLVSNPESAVECLSCETVKP 2214
AKAEAAFD+VD +GWVEE+QFEALMEAVGTTY+VEDHKPKL +IC + RLE+ FL WY DWLFG+++SSDE G+ V+ SK GF++L+ SQA GWKC CLVSN E+A++C+SCETV G EGK+ A G+ + S S P G TFG+ + K + +S +A A SS GGF FG P PA ++ + G + A + + P++V A E + N AKAEAAF +VD +GWVEE+QFEALMEA+GTTY+VEDHKPKL +IC + RLE+ FL WY DWLFG+++SSDE G ++ SK GF+ L+ SQA GWKC ACLVSN E+A++C+SCET KPG+EG + G G G SSGSA GGF FG P A + + VA F F VS +++A P +P A +T S G+ D A S G S D XXX XX XX AKAE AF EVD +GWVEE+QFEALMEAVGTTY+VEDHKPKL +IC + RLER AFL WY DWLFG+++ SDE GE K + SK GF++L+ SQA GWKC CLVSN E+A++C+SCETV+P
Sbjct: 1411 AKAEAAFDKVDNAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTDGRLEKQAFLAWYMDWLFGDEESSDEEGEVKSGVAAEGSKIAGFAALVKSQAGGWKCAVCLVSNAEAALKCVSCETVRPGQEGKVGASSAVGGAGILGGSGSGPTGGFTFGSPVAPVA-KTAAASSAAPAGSSG---------GGFSFGAPSPAPGTIPSPAASLQPSAGTNAXXXXXXXXXVKAASAADTGTATPAIVPADKAEVAPTVVGNNXXXXXXXXXXXXXXXXXXXX---------XXSAKAEAAFDKVDTAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTDGRLERQAFLTWYMDWLFGDEESSDEEGEVKSSVAAEGSKDAGFAALVKSQAGGWKCAACLVSNAEAALKCVSCETAKPGEEGNVGAGILG-------------------------GPSSGSA---------------GGFTFGTPCNTAVAAAAEASRVSSTTAVAXXXXXXFSFGVSPPAQTSAAPAE----KPESKPCAGSGDTGGXXXXXXXXXXXXXXXXLTFGSLPGAAADE-HAVAISSGSSVDVGGGGSDTGSXXXDXXERRXXKAKAEKAFAEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTDRRLERQAFLAWYMDWLFGDEESSDEEGEVKSGVAAEGSKDAGFAALVKSQAGGWKCAVCLVSNAEAALKCVSCETVRP 2088
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A6H5K2C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C3_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.130e-86 Identity = 222/450 (49.33%), Postives = 277/450 (61.56%), Query Frame = 1
Query: 931 DDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGGEGQEISVSS-----KTEGFSILLASQAAGWKCKACLVSNPESAVECLSCETVKPGDEGKITT-------GSKGSSASSWSPSFGLSFGTTKVTSAFKVGSSSGSATALSSVAGSSETDASGGFMFGGPPAGKSVTIAQVANPTAGGFLFDVSDATVSAS--------AALSLATAPPGKQPSAFVRNTDFAQDSRDGSDEDSLRAFESSGGVSGDGXXXXXXXXXXXXXXXXXXXXXAKAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICRENRLERDAFLTWYDDWLFGEDDLSDEGGEGKE--ISVSSKTEGFSSLLASQAAGWKCKACLVSNPESAVECLSCETVKP 2214
D+EERREE+AKAE AF EVD +GWVEE+QFEALMEA+GTTY+VEDHKPKL +IC RLE+ FLAWY DWLFGE++SS + GEG E S ++ K GF+ L+ QA GWKC ACLVSN ++ ++C SCE V+PG E K+ G G S S P+ G++FG+ V + +ATA SS+A +S T P +G + A + +P+AG T SA AA S A+AP +A + + + A+ + ES XXXXXXXXXXXXXXX EAAFD+VD +GWVEE+QFEALMEAVGTTY+VEDHKPKL +IC RLER AFLTWY DWLFGE++ S+E GE K + SK GF++L+ QA GWKC ACLVSN E A++C SCET KP
Sbjct: 663 DEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLERQAFLAWYMDWLFGEEESSHDEWGEGDESSPNAVGRAPKDAGFAALVRHQAGGWKCAACLVSNAKAVLKCASCEAVRPGQEDKVVASGVLGGAGILGGSGSG--PTGGVTFGS-------PVPPVAKTATA-SSIAPASSTGGXXXXXXXLPASGARSSSAALLHPSAG---------TNSAXXXXXXXXXAAKSSASAPAAGTSTASIASANEAE----------VEPTESPVNAE--------DXXXXXXXXXXXXXXXXXXEAAFDKVDNAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLERQAFLTWYMDWLFGEEESSEEEGELKPSVAAEGSKDAGFAALVKRQAGGWKCTACLVSNAEVALKCASCETAKP 1075
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A6G0XP53_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP53_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.210e-28 Identity = 204/769 (26.53%), Postives = 309/769 (40.18%), Query Frame = 1
Query: 130 KAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFG--EDD--------SSDEGGDEGKEVSVSSKTEGFSSLLASQAAGWKCKACLVSNPES-AVECLSCETVNSGGEGKISAGSKSISTSSSSPA--FGLTFGTGKSTCGFKLSLSSGSATALSSVAEISETDATGGFKFGGPPAGESVEIAPVIYSTAGGFLFGVSDAIGSASVGPSLVTAPPVEQPSALTRNTDEDLR---------------------------EVAQQSGDGSDEGNLDDVDDEERREERA--------KAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGGEG-----QEISVSSKTEGFSILLASQA--AGWKCKACLVSNPE-SAVECLSCETVKPGDEGKITTGSKGSS----ASSWSPSFGLSFGTTKVTSAFKVGSSSGSATALSSVAGSSETDASGGFMFGGPPAGKSVTIAQVANPTAGGFLFDVSDATVSASAALSLATAPPGKQPSAFVRNTDFAQDSRDGSDEDSLRAFESSGGVSGDGXXXXXXXXXXXXXXXXXXXXXAKAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICRENRLERDAFLTWYDDWLFGED-------------DLSDEGGEGKEISVSSKTEGFSSLLASQAAGWKCKACLVSNP-ESAVECLSCETVKP 2214
KA+AAFD VD+ G+G + FE L EA+GT YS E+H + + + + ++ F+ WY W+F EDD + + D + ++ + + A + WKC+ C++ NP + A +C+SC++ N + ++ +SPA FG S GF +S TD GF G P + AP S A F FGV + PP PS+ + GSD N+ V+D K AF +VD T G + A FE L EA+GT YS ++H L+ + R + K F+ WY W+F ++D SDE ++ S+ E + QA WKC+ C++ N + A +C SCET P +I + + S+ A ++P FG+S T K F V S+ T S A S+ F FG P NP A F F V T + S + ++TD + DGS XXXXXXXXXXXXXX KA AFD+VD G + ++FE + +A+GT YS ++H ++ + + + + F+ WY +W+F + D + + + + F + S WKC C++ N E+A C+SCE+ P
Sbjct: 441 KAKAAFDAVDKKGKGTIPLTDFEKLFEALGTVYSAEEHTRTIHKLDRKGVIRKEDFVAWYVQWIFADFEDDXXXXXXANAGAKDVDPNAPLKSEAEIKAAFAKFAPPSGSWKCEVCMIMNPTAGAPKCISCDSPNP----------NATKSAPASPAAGFGAFVAPPGSFKGFA----------------VSSTDKPTGF--GAPTS------AP---SGAQAFSFGVP-------------SQPPASTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTSNKEYGSDTNNVY-VEDXXXXXXXXXXXXXXXXKVSTAFDKVDSTHSGKIPVADFEKLFEALGTVYSADEHTRTLKKLERAGYVHKSDFVTWYITWIFADEDESDEEEATSVPDVDPSATIKSEAERKAAFAKFQAPTGSWKCETCMIMNTDPKAAKCASCETPNPNAPKEIKSATSSSASPFGAGGFTP-FGVS--TEKKAFGFGVTSTPDEKTRTPSAAPSTAQPT---FSFGVPSNN---------NPPA--FSFGVK-------------TEEKVNEKSDYGKDTDNVFNDEDGS-------------------------XXXXXXXXXXXXXXXKANDAFDQVDTEATGKIPSSKFENIFDALGTVYSADEHTRTIKKLDKNGYIFKKDFVAWYLNWIFADXXXXXXXXXXSAAPDFDPNAAKKSADEIKNAWKKFEAPPGS----WKCSVCMIVNKDENASRCVSCESPNP 1099
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A329RBZ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RBZ2_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.060e-24 Identity = 114/438 (26.03%), Postives = 189/438 (43.15%), Query Frame = 1
Query: 214 VGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFGEDDSSDE------GGDEGKEVSVSSKTE---GFSSLLASQAAGWKCKACLVSNPESAVECLSCETVN-------------------------------SGGEGKISAGSKSISTSSSSPAFGLT---------------FGTGKSTCGFKLSLSSGSATALSSVAEISETDATGGFKFGGPPAGESVEIAPVIYSTAGGFLFGVSDAIGSASVGPSLVTAPPVEQPSALTRNTDE-DLREVAQQSGDGSDEGNLDDVDDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDE------GGGEGQEISVSSKTEGFSIL--LASQAAGWKCKACLVSNPESAVECLSCETVKP 1335
+G+TY E+H +E + + ++ + F++WY +W+FG+DDS E K + SK E FS A + + WKC C+VSN A++C +CET N +GG+ K S+ S ++ ++ S A G + + G+A AL++ A AT GF FG AGG + + +A+V S+ P ++ + D E A+ G+ SDE +E R+EE A+A F + G ++ QF L +AMG+TY E+H +E + ++ ++ ++ F++WY +W+FG+DDS E + + SK E ++ ++ WKC C+VSN A++C +CET P
Sbjct: 1 MGSTYDEEEHASTVEHLEKDGKIYENDFVSWYVNWIFGDDDSXXXXXXXAPASSESKPAEMKSKEEIAAVFSKFTAKEGS-WKCAVCMVSNGPDAMKCSACETANPAAPKVVAXXXXXXXXXXXXXXSGGFSFPVPTGGDSKPSSFSFGVAPAAGSDAGGASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGAAAALTAPA------ATSGFSFG---------------VNAGGSPDAAATSKNAAAVDSSVKDTKPSSPKKTVSHEYGQNDENEFAESDGESSDE-------EEMRKEEEAQARVTFRTIASDGADYIASEQFPKLFKAMGSTYDEEEHASTVEHLEKDGKIYENDFVSWYVNWIFGDDDSXXXXXXXAPASSESKPAEMKSKEEIAAVFSKFTAKEGSWKCAVCMVSNGPDAMKCSACETANP 409
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A0P1B0K9_PLAHL (Nuclear pore complex n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0K9_PLAHL) HSP 1 Score: 112 bits (279), Expect = 1.230e-21 Identity = 113/434 (26.04%), Postives = 185/434 (42.63%), Query Frame = 1
Query: 133 AEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFGEDDSSDEGGDEGKEVSVSSKTE------------GFSSLLASQAAGWKCKACLVSNPESAVECLSCETVNSGGEGKISAGSKSISTSSSSP--AFGLTFGTGKSTCGFKLSLSSGSATALSSVAEISETDATGGFKFGGPPAGESVEIAPVIYSTAGGFLFGVSDAIGSASVGPSLVTAPPVEQPSALTRNTDED-LREVAQQSGDGSDEGNLDDVDDEERREE------RAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGG---EGQEISVSSKTE---GFSILLASQAAGWKCKACLVSNPESAVECLSCETVKPGDEGKI 1353
A F + G ++ QF L + +G+TY E H L+ + + ++ D F++WY +W+FG++D DE K + KTE FS ++ + WKC C+VSN +C +CET N KI A +KS+S +S+ + G +F LS S G A S+ F FG P + S+ GF F + A+ + + +T+ +++ +DE D E A A A F + G ++ F L +G+TY E+H +ES+ R+ ++ +D F++WY +WLFG +DS E + + + + SK E FS A++ + WKC C+V+N ++C +CET P +I
Sbjct: 471 ARTKFRTIALDGANFILSEQFPNLFKVMGSTYDEEVHAATLDDLRKDGKIYEDDFVSWYVNWIFGDEDYES---DEDKSICEPLKTETTKMKSKEEIEAAFSKFTVAEGS-WKCAVCMVSNGPDENKCSACETPNPAAP-KIVAPAKSVSVTSAGSIGSGGFSFPVSIEKDSKSLSFSFGGPEAKSTE-----------FSFGNMPTTTACSGQNSSTSSGTGFTFSTMTSFPGATDTSAFNFGVKADDAQNTVNDTESSSVKKTTAHEYGQNDENEFASSDGESXXXXXXXXXXEATARALFRTLTSDGADFIASTLFPKLFAVLGSTYDEEEHASTVESLSRDGKIYEDDFVSWYVNWLFGAEDSESEEPSIPPKAEPVKMKSKEEIAAVFSKYTATEGS-WKCAVCMVNNAPHLLKCSACETPNPASSKEI 887
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A6H5JYN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN5_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.600e-18 Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = -2
Query: 1038 LPSSPGFTVSHDRHSTADSGFETRHALHFHPAAWLANKIEKPSVFDET-----LISCPSPPPSSDESSSPKSQSSYHAKNTSFSKRSSRHIDSSFGLWSSTEYVVPIAS 1349
L S PG T SHD H F+T+HA HF P AWL ++ P+ F L+S PSP S D+SSSP SQS YHAKN S R + I +SFGLWSST + P+ S
Sbjct: 13 LSSCPGLTASHDAHFNTALAFDTKHAAHFQPPAWLISRDANPASFGARPTASGLLSSPSPHSSCDDSSSPNSQSMYHAKNACLSNRPAVQIANSFGLWSSTAWCRPLPS 121
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A8J5MAM4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MAM4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.540e-17 Identity = 102/398 (25.63%), Postives = 170/398 (42.71%), Query Frame = 1
Query: 130 KAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFGEDDS------SDEGGDEGKEVSVSSKTE---GFSSLLASQAAGWKCKACLVSNPESAVECLSCETVNSGGEGKISAGSKSISTSSSSPAFGLTFGTGKSTCGFKLSLSSGSATALSS----VAEISETDATG-----GFKFGGPP--------------------AGESVEIAPVIYSTAGGFLFGVS-----DAIGSASVGPSLVTAPPVEQPSALTRNTDE-----DLREVAQQSGDGSDEGNLDDVDDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDE 1179
KA F + G ++ QF L +A+G+TY E+H +E + + ++ + F++WY +W+FG+DDS + E K + SK E FS A + + WKC C+VSN A++C +CET N ++ G GF +S+G + SS V +++DA GF FGG + AP S GF FGV+ DA ++ ++ ++ +PS+ + D E A+ G+ SD + KA+ F + G ++ QF L +AMG TY E+H ++S+ ++ ++ ++ F++WY +W+FG+DDS E
Sbjct: 473 KARTTFRTMASDGADYIASEQFPKLFKAMGSTYDEEEHASTVEHLEKDGKIYENDFVSWYVNWIFGDDDSXXXXXEAAPASSELKPAEMKSKEEIAAAFSKFTAKEGS-WKCAVCMVSNGPDAMKCSACETANPAAPKVVAXXXXXXXXXXXXXXSG----------GFSFPVSTGGDSKASSFSFGVTPPADSDAADASKPTGFSFGGXXXXXXXXXXXXXXXXXXXXXFGAAAASTAPAATS---GFSFGVNAGGSPDAAATSKNAAAVDSSVKDTKPSSPKKTVSHEYGQNDENEFAESDGESSDXXXX-------XXXXQDKAKVMFRTIASDGADYIASEQFPKLFKAMGATYDDEEHATTVKSLEKDGKIYENDFVSWYVNWIFGDDDSDSE 849
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A8J2SJ63_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ63_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.290e-16 Identity = 132/500 (26.40%), Postives = 190/500 (38.00%), Query Frame = 1
Query: 931 DDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGGEGQEISVSSKTEG---FSILLASQAAGWKCKACLVSNPESAVECLSCETVKPGDEGKITTGSKGSSASSWSPSFGLSFGTTKVTSAFKVGSSSGSATALSS-----------------------------------------------VAGSSETDASGGFMFGGPP--AGKSVTIAQVANPTAGGFLFDVSDATVSASAALSLATAPPGKQPSAFV---RNTDFAQDSRDGSDEDSLRAF-----ESSGGVSGDGXXXXXXXXXXXXXXXXXXXXXA-------KAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICRENRLERDAFLTWYDDWLFGEDDLSDEGGEGKEISVSSKTEG-----FSSLLASQAAGWKCKACLVSNPESAVECLSCETVKP 2214
D+EER EER A AF V G+ V ++F+ALMEA+GTTY E+H+ L + + +D F+ WY DW+ G+ DS +++++ ++ L A++ WKC+ C V N + A +C +CET P G SFG+ + A A VA + D GF FG P A KS A P A + ++ A +A S V R D +G D L A + SG ++ + XXX A AFD V G V ++F+ALMEA+GTTY E+H+ L + + RDAF+ WY DW+ G+ D SD E ++SL A++ WKC+ C V N + A +C +CET P
Sbjct: 962 DEEEREEERGNAREAFDTV-ADGKTEVPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNPAXXXXXXXXXXXXXXXXSVGPGGFSFGSXXXXXXXXXXXAPAPAPAXXXXXXXXXXXXXXXAAASPAAXXXXXXXXAXAXXAAPAPXXXXXXXXXXVATAGGAD---GFRFGAPADEAPKSPQEQWDAAPRADPDAPPPEPSAGDSAEAAKARSAFDEVDSSGVVPVDRFEDLLDSVGEGFHGDELEAQRAKVDDGSGRITREAFARYYVALCANVGEDDSDXXXXXXXXXSQSAREAFDTV-ADGATSVPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGD-SDXXXXXXXXXXXPAAESKAAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 1455
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: D0MV19_PHYIT (Nuclear pore complex protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MV19_PHYIT) HSP 1 Score: 90.5 bits (223), Expect = 8.460e-15 Identity = 106/394 (26.90%), Postives = 167/394 (42.39%), Query Frame = 1
Query: 130 KAEAAFDEVDRTGRGWVEEAQFEALMEAVGTTYSVEDHKPKLESICCENRLERDVFLTWYDDWLFGEDDS-SDEGGD----EGKEVSVSSKTE---GFSSLLASQAAGWKCKACLVSNPESAVECLSCETVNSGGEGKISAGSKSISTSSSSPAFGLTFGTGKSTCGFKLSLSSGSATALSS-------VAEISETDATGGFKFGGPPAGESV------EIAPVIY------------STA------GGFLFGVSDAIGS----ASVGPSLVTAPPVEQPSALTRNTDE-DLREVAQQSGDGSDEGNLDDVDDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDE 1179
KA F + G + F L +A+G TY E+H +ES+ + ++ + F+TWY +W+FG+D+S SDE D E K + SK E FS A + + WKC C+VSN A++C +CET N I+ ++T+S++ A + G GF ++S+GS + SS A S DAT AP STA GG G +DA + A+V + P A++ + D E A+ G+ SD KA F + G ++ F L +AMG TY E+H + + ++ ++ ++ F+ WY +W+FG+ DS +
Sbjct: 473 KARTTFRSMTSDGADHITREVFPKLFKAMGATYDEEEHTRTIESLEKDGKIYENDFVTWYVNWIFGDDESESDEEVDVSAVESKPAEMKSKEEIAAAFSKFTAKEGS-WKCAVCMVSNGPDAMKCSACETPNPAAPKTIAP----VTTASANSAGSIGSG------GFSFAVSTGSDSKPSSFSFGVTPAAGFSAADATKXXXXXXXXXXXXXXXXXXSNTAPXXXXXXXXXXXXSXASTATSSVSFGGDTSGSTDATSTSKTAAAVDSLVKDTEPASPKKAISHEYGQNDENEFAESDGESSDXXXX-------XXXXXXKARTTFRSIAADGADYIASELFPKLFKAMGATYDGEEHTNTMTDLEKDGKIYENDFVTWYVNWIFGDVDSDSD 848
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Match: A0A7S4E7X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.950e-14 Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 931 DDEERREERAKAEAAFGEVDRTGRGWVEEAQFEALMEAMGTTYSVEDHKPKLESICREDRLEKDVFLAWYDDWLFGEDDSSDEGGGEGQEISVSSKTEG---FSILLASQAAGWKCKACLVSNPESAVECLSCETVKP 1335
D+EER EER A AF V G+ V ++F+ALMEA+GTTY E+H+ L + + +D F+ WY DW+ G+ DS +++++ ++ L A++ WKC+ C V N + A +C +CET P
Sbjct: 122 DEEEREEERGNAREAFDTV-ADGKTEVPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86384.16205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86384.16205.1 >prot_H-elongata_contig86384.16205.1 ID=prot_H-elongata_contig86384.16205.1|Name=mRNA_H-elongata_contig86384.16205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=738bp MLLGADSWTAFESSGDGRGDRNGVDNDQGDDDIDDEERREERAKAEAAFDback to top mRNA from alignment at H-elongata_contig86384:63..2721+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86384.16205.1 ID=mRNA_H-elongata_contig86384.16205.1|Name=mRNA_H-elongata_contig86384.16205.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2659bp|location=Sequence derived from alignment at H-elongata_contig86384:63..2721+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86384:63..2721+ >mRNA_H-elongata_contig86384.16205.1 ID=mRNA_H-elongata_contig86384.16205.1|Name=mRNA_H-elongata_contig86384.16205.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4428bp|location=Sequence derived from alignment at H-elongata_contig86384:63..2721+ (Himanthalia elongata Himel1 dioecious)back to top |