mRNA_H-elongata_contig8623.16198.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 249 bits (635), Expect = 9.620e-73 Identity = 119/202 (58.91%), Postives = 150/202 (74.26%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKYFASLF 606
R G KE++++PHVF RPEFLMI+GVY+ TY AN + TTCE +VD WP+F+ TSAVN+ SC+AKD FTRMF + P +P STY LFT RD TV ASFN+P P S++LQ + GMS+ A+ TAQ+ACPA +Q STPL+L+G+DLYNNP S+A R F+ S+YTSS+ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 205 bits (521), Expect = 3.800e-57 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFR 585
++GF+ + LKPH F + +FL I+GVY TYVAAN I TTCE +++D PKF GT+A N+A C+ KD FTRMF TV P +Y LF ARD +TVAASFN P S YLQ+ ++ TA++ AQL CPA +Q STPL+LLG+DLYN N R I EY S + R++R GPAFGIGGVGNT R
Sbjct: 25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLR 219
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 192 bits (488), Expect = 4.230e-52 Identity = 96/197 (48.73%), Postives = 126/197 (63.96%), Query Frame = 1
Query: 16 EMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKYFASLF 606
+ + P F + EFL+I+G+Y+ TYV+AN I T CE ++ D++ PKFIGT+AVN++ C+AKD F RMF + P P ++ LF RD +TVAASFN P +K L++ M A AQL CPA +Q STPL+LLG+DLYNN SA R F+ EY S+ R+ R GPAFGIGGVGNT FR + F
Sbjct: 65 DFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 190 bits (483), Expect = 1.870e-51 Identity = 98/199 (49.25%), Postives = 127/199 (63.82%), Query Frame = 1
Query: 4 EGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDR---WPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKY 591
+GFK +I +P F +F +++G+Y TY+ AN++ T E+ + W KFI TS +N+ C+ KD FTRMF R +P TYL F ARD MTVAASFN P + +LQE M Q+ + VTAQLACPA IQ STP++LLG+DLYN PN+++ R I EY S + RV R GPAFGIGGVGNT FR +
Sbjct: 56 QGFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG) HSP 1 Score: 190 bits (482), Expect = 4.140e-51 Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 1
Query: 4 EGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVD---DRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKY 591
+GF+ + +PH F ++ +I+G+Y TY+ ANM+ TTCE+ VD W KF+ T+AVN++ C+ KD FTRMF +P+P +YL F RD MTVAASF P SK LQE+ S+ A V AQL+CPA +Q FSTPL+LLG+DLYN P ++ R I S Y + + R +R GPAFGIGGVGNT FR Y
Sbjct: 70 QGFQTLFTQPHKFVGSIQYRLIFGLYFGTYMTANMVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEK-EWSEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 189 bits (480), Expect = 2.460e-50 Identity = 95/197 (48.22%), Postives = 130/197 (65.99%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGM--SQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFR 585
R+G + ++++PH F P+F +I G+Y TY+ AN + TTCE + + PKF+ T+ VN++ C+ KD FTRMF RP+P +TY LF +RD +TVAASFN P+ S L R G +++A+V AQLACPA +Q STP++LLG+DLYN P SA R + EY S I R++R GPAFGIGG+GN FR
Sbjct: 85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 187 bits (476), Expect = 3.270e-50 Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCE---RSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQ-ERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKY 591
++GF + PH F + +F +++ +Y TY+ AN+I TT E R + KF+GT+AVN+ +C+ KD FTRMF TV +P+P +YLLF +RD +T+ +SFN P SKY+Q E + S K ++ AQLACPA +Q STPL+LLG+DLYNN NSS+ R I EY S++ RV+R PAFGIGGVGN R Y
Sbjct: 71 KQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 186 bits (473), Expect = 5.350e-50 Identity = 92/202 (45.54%), Postives = 124/202 (61.39%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFRKYFASLF 606
+E K + P F + EF++++G+Y TY +AN I T CE ++ D++ PKF+GT+AVN+ C+AKD F +MF V P P LF RD +TV ASFN P +K L+ G+ A AQL CPA +Q STPL+LLG+DLYNN +S AR +F+ EY S + R+ R GPAFGIGGVGNT R+ + F
Sbjct: 61 KELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 184 bits (468), Expect = 2.570e-49 Identity = 91/195 (46.67%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 1 REGFKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFR 585
RE + + P F + EF +I+G+Y TY+AAN+ T CE +++D++ PKFI T+AVN++ C+AKD F RMF + P P ++ LF RD MT ASFN P +K ++++ M + A AQL CPA +QL STPL+LLG+DLYNN + R F+ EY S++ R+ R GPAFGIGGVGNT FR
Sbjct: 60 RELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFR 254
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 182 bits (463), Expect = 1.340e-48 Identity = 91/197 (46.19%), Postives = 125/197 (63.45%), Query Frame = 1
Query: 7 GFKEMILK----PHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSQKTANVTAQLACPAGIQLFSTPLNLLGMDLYNNPNSSAMARGKFILSEYTSSMIMRVSRTGPAFGIGGVGNTAFR 585
G KE+ ++ P F + EF +I+G+Y TYV AN++ + CE ++ D++ PKFIGT+AVN++ C+AKD F RMF + P P ++ LF RD MT ASFN P +K +++ M + A+ AQL CPA +Q STPL+L+G+DLYNN + R F+ EY S+ RV R GPAFGIGGVGNT FR
Sbjct: 60 GLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFR 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8623.16198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8623.16198.1 >prot_H-elongata_contig8623.16198.1 ID=prot_H-elongata_contig8623.16198.1|Name=mRNA_H-elongata_contig8623.16198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVDDRWPKFIGTback to top mRNA from alignment at H-elongata_contig8623:5959..9345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8623.16198.1 ID=mRNA_H-elongata_contig8623.16198.1|Name=mRNA_H-elongata_contig8623.16198.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3387bp|location=Sequence derived from alignment at H-elongata_contig8623:5959..9345- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8623:5959..9345- >mRNA_H-elongata_contig8623.16198.1 ID=mRNA_H-elongata_contig8623.16198.1|Name=mRNA_H-elongata_contig8623.16198.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig8623:5959..9345- (Himanthalia elongata Himel1 dioecious)back to top |