mRNA_H-elongata_contig86099.16186.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig86099.16186.1
Unique NamemRNA_H-elongata_contig86099.16186.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: D7FWQ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWQ7_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 8.870e-77
Identity = 137/194 (70.62%), Postives = 154/194 (79.38%), Query Frame = 1 
Query:    1 KQDLLEVIKRDRHRKEKGEGAIPIRTRVGADPLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            +QDLLEV++R+R R   GEG        G DPLL  +DGS+RSLLQAWFSVGFLELRRIT+E SGGALLEKIARYEAVHPV SLSELK RLG GRRCFAFFHPCL  EPLVF+HVALLP++A SM+DI  RG    G  E+ E  GC E   RS   AVFYSI++TQKGLQGVQLGNFLIKRVV++LRAELPQ+
Sbjct:  221 RQDLLEVMRRERRRPGAGEGKA-----AGPDPLLSALDGSIRSLLQAWFSVGFLELRRITFEDSGGALLEKIARYEAVHPVGSLSELKARLGEGRRCFAFFHPCLPDEPLVFVHVALLPEVAGSMDDIVNRG----GCGEEEEGSGCEEDEARS---AVFYSISATQKGLQGVQLGNFLIKRVVAQLRAELPQL 402
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: H3G7K9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7K9_PHYRM)

HSP 1 Score: 174 bits (441), Expect = 3.260e-50
Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = 1 
Query:   94 PLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELP 576
            P L ++D  L+  L AWFSVGFL+L R+TYE S G LLEKI RYEAVHPV +++ELKRRLG GRRCFAFFHP +  EPLVF+HVAL+ ++A SM+ IR    D++ +  +A +          ++ A+FYSI+STQKGL GV LGNFLIK V   L+ E P
Sbjct:   32 PALRSLDAGLKQFLAAWFSVGFLKLERVTYEHSPGQLLEKIIRYEAVHPVGTIAELKRRLGNGRRCFAFFHPSIPDEPLVFVHVALMQEIASSMQSIR----DQTEQLAEASQ----------TKAAIFYSISSTQKGLSGVDLGNFLIKEVAKALKVEYP 178
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A397ADS1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ADS1_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.870e-50
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = 1 
Query:   97 LLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            +L  +D  L+S L +WFSVGFL L R+TYE S GALLEKI RYEAVHPV ++ ELKRRLGRGRRCFAFFHP +  EPLVF+HVAL+P +A SM  I+           +A E+   E     +  A+FYSI+STQ GLQGV LGNFLIK+V   L+ +LP +
Sbjct:   97 VLRALDQHLQSFLASWFSVGFLRLERVTYEQSPGALLEKIIRYEAVHPVGTIIELKRRLGRGRRCFAFFHPSVPDEPLVFVHVALVPRLADSMTYIK-----------EATEQLADEHE---ANAAIFYSISSTQPGLQGVDLGNFLIKQVAKRLQEDLPNI 244
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A3R7IM01_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IM01_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.080e-49
Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 1 
Query:   94 PLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            P L ++D SL+  L +WFSVGFL+L R+TYE S G LLEKI RYEAVHPV +++ELKRRLG GRRCFAFFHP +  EPLVF+HVAL+ +MA SM+ IR           D  E+   + H   +  A+FYSI+STQKGL GV LGNFLIK V   L++E P +
Sbjct:  218 PALRSLDASLKQFLASWFSVGFLKLERVTYEHSSGQLLEKIIRYEAVHPVGTIAELKRRLGNGRRCFAFFHPSIPDEPLVFVHVALMTEMASSMQSIR-----------DETEQLTEDSH---ANAAIFYSISSTQKGLSGVDLGNFLIKEVAKALKSEHPHL 366
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: G4ZBK9_PHYSP (Putative malonyl-CoA decarboxylase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZBK9_PHYSP)

HSP 1 Score: 174 bits (441), Expect = 2.880e-49
Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 1 
Query:   94 PLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            P L ++D SL+  L +WFSVGFL+L R+TYE S G LLEKI RYEAVHPV +++ELKRRLG GRRCFAFFHP +  EPLVF+H+AL+ ++A SM+ IR    D + +  +A +          ++ A+FYSI+STQKGL GV LGNFLIK V   L+ E P +
Sbjct:  110 PALRSLDASLKQFLASWFSVGFLKLERVTYEHSPGQLLEKIIRYEAVHPVGTIAELKRRLGNGRRCFAFFHPSIPDEPLVFVHIALMQEIASSMQSIR----DETEQLAEASQ----------AKAAIFYSISSTQKGLSGVDLGNFLIKEVAKALKTEYPHL 258
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A225VP39_9STRA (Malonyl-CoA decarboxylase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VP39_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.880e-49
Identity = 90/163 (55.21%), Postives = 115/163 (70.55%), Query Frame = 1 
Query:   94 PLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            P L ++D SL+  L +WFS+GFL+L R+TYE S G LLEKI RYEAVHPV +++ELKRRLG GRRCFAFFHP +  EPLVF+HVAL+ ++A SM+ IR          ++ E+   + + K     A+FYSI+STQKGL GV LGNFLIK V   L+ E PQ+
Sbjct:  110 PALRSLDASLKQYLASWFSIGFLKLERVTYEHSPGQLLEKIIRYEAVHPVGTIAELKRRLGTGRRCFAFFHPSIPDEPLVFVHVALMQEIASSMQSIR----------DETEQLAETSQAK----AAIFYSISSTQKGLSGVDLGNFLIKEVAKALKTEYPQL 258
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A1W0ABP8_9STRA (Malonyl-CoA decarboxylase (MCD) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABP8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.510e-49
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 1 
Query:  100 LETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            L  +D  L++ L AWFSVGFL L R+TYE S GALLEKI RYEAVHPV ++ ELKRRLGRGRRC+AFFHP +  EPLVF+HVAL+P++A SM  I+             E+    E H+  ++ A+FYSI+STQ GLQGV LGN+LIK V   L+ ELP V
Sbjct:  207 LRALDSELQTFLAAWFSVGFLSLERVTYERSSGALLEKIIRYEAVHPVGTIIELKRRLGRGRRCYAFFHPSVPEEPLVFVHVALVPELASSMGYIK-------------EQTEVLE-HEHDAKAAIFYSISSTQPGLQGVDLGNYLIKEVAKRLQEELPNV 353
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A397D9L4_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D9L4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.080e-48
Identity = 92/162 (56.79%), Postives = 113/162 (69.75%), Query Frame = 1 
Query:   97 LLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            +L  +D  L+S L +WFSVGFL L R+TYE S GALLEKI RYEAVHPV ++ ELKRRLGRGRRCFAFFHP +  EPLVF+HVAL+P +A SM  I+           +A E+   E     +  A+FYSI+STQ GLQGV LGNFLIK+V   L+ +LP +
Sbjct:  117 VLRALDQHLQSFLASWFSVGFLRLERVTYEQSPGALLEKIIRYEAVHPVGTIIELKRRLGRGRRCFAFFHPSVPDEPLVFVHVALVPRLADSMTYIK-----------EATEQLADEHE---ANAAIFYSISSTQPGLQGVDLGNFLIKQVAKRLQEDLPNI 264
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A1V9YF08_9STRA (Malonyl-CoA decarboxylase (MCD) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YF08_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.090e-48
Identity = 89/161 (55.28%), Postives = 111/161 (68.94%), Query Frame = 1 
Query:  100 LETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            L  +DG L++ L AWF+VGFL L R+TYE S GALLEKI RYEAVHPV ++ ELKRRLG GRRC+AFFHP +  EPLVF+HVAL+P+MA  M  I+              E+  +  H+  +  A+FYSI+STQ GLQGV LGN+LIK V   L+ ELP +
Sbjct:  199 LRALDGHLQTFLAAWFAVGFLSLERVTYERSSGALLEKIIRYEAVHPVGTIIELKRRLGNGRRCYAFFHPSVPDEPLVFVHVALVPEMASGMAYIK--------------EQTEALEHEHDAHAAIFYSISSTQPGLQGVDLGNYLIKEVAQRLQIELPNI 345
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BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Match: A0A329RWB4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWB4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.510e-48
Identity = 92/163 (56.44%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:   94 PLLETMDGSLRSLLQAWFSVGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAFFHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSERHKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV 582
            P L ++D SL+  L +WFSVGFL+L R+TYE S G LLEKI RYEAVHPV +++ELKRRLG GRRCFAFFHP +  EPLVF+HVAL+ ++A SM+ IR           D  E+     H   +  A+FYSI+STQKGL GV LGNFLIK V   L+AE P +
Sbjct:  236 PALRSLDASLKQFLASWFSVGFLKLERVTYEHSPGQLLEKIIRYEAVHPVGTIAELKRRLGNGRRCFAFFHPSIPDEPLVFVHVALMQEIASSMQSIR-----------DETEQLTETSH---ANAAIFYSISSTQKGLAGVDLGNFLIKEVAKALKAEHPHL 384
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86099.16186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWQ7_ECTSI8.870e-7770.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3G7K9_PHYRM3.260e-5055.90Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A397ADS1_9STRA6.870e-5056.79Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3R7IM01_9STRA1.080e-4956.44Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
G4ZBK9_PHYSP2.880e-4954.60Putative malonyl-CoA decarboxylase n=1 Tax=Phytoph... [more]
A0A225VP39_9STRA2.880e-4955.21Malonyl-CoA decarboxylase n=1 Tax=Phytophthora meg... [more]
A0A1W0ABP8_9STRA6.510e-4957.14Malonyl-CoA decarboxylase (MCD) n=1 Tax=Thraustoth... [more]
A0A397D9L4_9STRA1.080e-4856.79Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A1V9YF08_9STRA1.090e-4855.28Malonyl-CoA decarboxylase (MCD) n=1 Tax=Achlya hyp... [more]
A0A329RWB4_9STRA1.510e-4856.44Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86099contigH-elongata_contig86099:293..2206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.0
Seed ortholog evalue2.8e-65
Seed eggNOG ortholog2880.D7FWQ7
Preferred nameMLYCD
KEGG rclassRC00040,RC00561
KEGG koko:K00454,ko:K01578,ko:K18663
KEGG ReactionR00233,R03626,R07864,R07869
KEGG Pathwayko00410,ko00591,ko00592,ko00640,ko01100,ko01110,ko04146,ko04152,map00410,map00591,map00592,map00640,map01100,map01110,map04146,map04152
KEGG ModuleM00113
GOsGO:0002931,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006109,GO:0006139,GO:0006163,GO:0006164,GO:0006195,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009154,GO:0009165,GO:0009166,GO:0009259,GO:0009260,GO:0009261,GO:0009893,GO:0009894,GO:0009987,GO:0010565,GO:0010675,GO:0010906,GO:0015031,GO:0015833,GO:0016043,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019216,GO:0019217,GO:0019222,GO:0019395,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030258,GO:0031323,GO:0031325,GO:0031329,GO:0031907,GO:0031974,GO:0031998,GO:0032787,GO:0033036,GO:0033365,GO:0033865,GO:0033866,GO:0033869,GO:0033875,GO:0034030,GO:0034031,GO:0034032,GO:0034033,GO:0034034,GO:0034404,GO:0034440,GO:0034613,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0035384,GO:0042579,GO:0042802,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045834,GO:0045923,GO:0046320,GO:0046321,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048522,GO:0050080,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0055086,GO:0055114,GO:0062012,GO:0062013,GO:0065007,GO:0070013,GO:0070727,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072523,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2001293,GO:2001294
EggNOG free text desc.malonyl-CoA decarboxylase activity
EggNOG OGsCOG1593@1,KOG3018@2759
EC1.13.11.12,3.6.4.12,4.1.1.9
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size582
Cds size582
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86099.16186.1prot_H-elongata_contig86099.16186.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig86099 293..2206 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931263.8292077-CDS-H-elongata_contig86099:292..4121622931263.8292077-CDS-H-elongata_contig86099:292..412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 293..412 -
1691679765.026044-CDS-H-elongata_contig86099:292..4121691679765.026044-CDS-H-elongata_contig86099:292..412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 293..412 -
1622931263.842609-CDS-H-elongata_contig86099:1022..10471622931263.842609-CDS-H-elongata_contig86099:1022..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1023..1047 -
1691679765.0395198-CDS-H-elongata_contig86099:1022..10471691679765.0395198-CDS-H-elongata_contig86099:1022..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1023..1047 -
1622931263.8590667-CDS-H-elongata_contig86099:1095..13111622931263.8590667-CDS-H-elongata_contig86099:1095..1311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1096..1311 -
1691679765.049-CDS-H-elongata_contig86099:1095..13111691679765.049-CDS-H-elongata_contig86099:1095..1311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1096..1311 -
1622931263.8747294-CDS-H-elongata_contig86099:1985..22061622931263.8747294-CDS-H-elongata_contig86099:1985..2206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1986..2206 -
1691679765.0593736-CDS-H-elongata_contig86099:1985..22061691679765.0593736-CDS-H-elongata_contig86099:1985..2206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86099 1986..2206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig86099.16186.1

>prot_H-elongata_contig86099.16186.1 ID=prot_H-elongata_contig86099.16186.1|Name=mRNA_H-elongata_contig86099.16186.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
KQDLLEVIKRDRHRKEKGEGAIPIRTRVGADPLLETMDGSLRSLLQAWFS
VGFLELRRITYEGSGGALLEKIARYEAVHPVHSLSELKRRLGRGRRCFAF
FHPCLSGEPLVFLHVALLPDMAKSMEDIRGRGRDRSGRREDAEERGCSER
HKRSSRCAVFYSITSTQKGLQGVQLGNFLIKRVVSELRAELPQV
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mRNA from alignment at H-elongata_contig86099:293..2206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig86099.16186.1 ID=mRNA_H-elongata_contig86099.16186.1|Name=mRNA_H-elongata_contig86099.16186.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1914bp|location=Sequence derived from alignment at H-elongata_contig86099:293..2206- (Himanthalia elongata Himel1 dioecious)
AAACAGGACCTACTGGAGGTGATCAAGAGGGACCGCCACCGCAAAGAGAA
AGGGGAGGGCGCGATCCCGATACGAACTAGGGTGGGTGCGGATCCCCTGC
TCGAGACCATGGACGGCTCCCTTCGATCTCTGCTGCAGGCATGGTTCAGC
GTGGGGTTTCTGGAGCTGCGCCGCATAACGTACGAGGGCTCCGGCGGAGC
GCTTCTCGAGAAAATAGCGCGGTGAGGCAGGGGGGAGGCAGGATTTTCTT
GAAGAGCAGCCGATGGGTGGCGTTTTCGACACGTGCAGCGCGTGGATTGT
TGAGGGCTTCAATGTTCTCCGCGATGTGGTGTGGTGACGTACGTCAGGAC
AAGCGATTGATAGGATTGGCAGGAGGATCGGTGTGGATACGGAATACTTT
CAAGCAGAGGAATGGACGTGATCGAAGACAAAACCGTGTCTTTTCAAACA
CCCAGGCTTTTTGTAAACAGGTGTTTATGTGTGTGTGTGTGTGTGTGTGT
GTGTTTGCACGGAGCTCAAAATACGGTCTTCGTACGGAGGCGAGTTATGC
TCATCTGACGAATGGAGCTCAACTAATACATCATGACTGCGCGCACGCTC
ACACAGATAGACATACACATGCACATACATGAGGACGGTCGGTCGACGGG
AACGAGGAGCAAAATGTCAGCACTTCTTACAACCCCGGCGAGACTGATTC
CTGTACAGGAGGCGCGTTTTCCCTCTGGGTCGAAACCGTCGCGCCCAGTC
TGTTGTGCCTTTATAGCATATATCAATAGTACCGCTTGTTTTGAAGGAAG
GAGGTGGCGGCTTGTTCGATGCCGAACCGGAGCGCCGACTTGGGTTTCAA
GCTTCAAAACTGATTCAAAGCCGTGTGTATGCGTCGACGTTGCAGATATG
AGGCCGTTCATCCGGTGCACTCACTTTCTGAGCTCAAGCGCCGCCTGGGA
CGCGGTCGGCGTTGCTTTGCTTTCTTCCACCCGTGCCTGTCCGGGGAGCC
CCTGGTCTTCCTCCACGTCGCCCTGCTGCCCGACATGGCGAAGAGCATGG
AAGACATCAGGGGGAGGGGAAGAGATAGAAGCGGCCGCCGCGAGGATGCG
GAAGAGCGGGGGTCAGAGGAAGGCGACGAGAGAGATGAAGAGGATCAGGC
GAGAAGGAGATGTAGCGAGAGACATAAACGTTCGGTAGCTCAGCCAAGGG
TGGGGGAGGAAAGCAGAGTCCGTTCGCAAGCTTTGTGTCTCTTCAGCTGT
CGAAAAAGAGAGAAATATATATAATAGAGAGAAGGAGAGTCAGCGCCTCA
GGTACTACCATAGCCTCAGGTACTACCATAGCCAAGCCGCCCCGACATTA
ATTACCACATCACCACAAATATATATATATATATATATATTTTTTTTCCT
GAATAATCTTCTCCCGAGACCAGTCTTCTGCGGCTTTAGTGCAGGGGTTT
CATATACTCTGCTCCCCTTGACCCCAAAAGTCTGGTGAAAAGCACCCACG
CATAGAGGAAATACCGCGTACACTCGCCGTGGTGATGTGGGGAAACGGAA
CCATGAGTGGTAACAAGGCGCGTTCCTGCTGATGCTGATACTACTTCTCA
TTGCATTTTGTTGTATCGCTTCCCTCGAATACGCGTTGGGTTTTATTGTT
GAGAGAGGCGGTGGACATTCTCGAAAAAAGTGTACGAAGTACTTCGTGCA
AACATACCTGTATAATAGTAATGCGATATGTTTTTATGCCCCTCCTCCGC
CCCGCCCCCTACCCTTTGCCGCCGCTGTCTTCGATGGTTTCCAGTCTCGA
TGTGCTGTATTTTATTCCATAACGTCAACGCAGAAAGGCCTTCAGGGAGT
ACAGCTCGGCAACTTCCTCATCAAAAGGGTGGTGTCGGAGCTGAGAGCGG
AGCTACCGCAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig86099:293..2206-

>mRNA_H-elongata_contig86099.16186.1 ID=mRNA_H-elongata_contig86099.16186.1|Name=mRNA_H-elongata_contig86099.16186.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig86099:293..2206- (Himanthalia elongata Himel1 dioecious)
AAACAGGACCTACTGGAGGTGATCAAGAGGGACCGCCACCGCAAAGAGAA
AGGGGAGGGCGCGATCCCGATACGAACTAGGGTGGGTGCGGATCCCCTGC
TCGAGACCATGGACGGCTCCCTTCGATCTCTGCTGCAGGCATGGTTCAGC
GTGGGGTTTCTGGAGCTGCGCCGCATAACGTACGAGGGCTCCGGCGGAGC
GCTTCTCGAGAAAATAGCGCGAAACAGGACCTACTGGAGGTGATCAAGAG
GGACCGCCACCGCAAAGAGAAAGGGGAGGGCGCGATCCCGATACGAACTA
GGGTGGGTGCGGATCCCCTGCTCGAGACCATGGACGGCTCCCTTCGATCT
CTGCTGCAGGCATGGTTCAGCGTGGGGTTTCTGGAGCTGCGCCGCATAAC
GTACGAGGGCTCCGGCGGAGCGCTTCTCGAGAAAATAGCGCGATATGAGG
CCGTTCATCCGGTGCACTCACTTTCTGAGCTCAAGCGCCGCCTGGGACGC
GGTCGGCGTTGCTTTGCTTTCTTCCACCCGTGCCTGTCCGGGGAGCCCCT
GGTCTTCCTCCACGTCGCCCTGCTGCCCGACATGGCGAAGAGCATGGAAG
ACATCAGGGGGAGGGGAAGAGATAGAAGCGGCCGCCGCGAGGATGCGGAA
GAGCGGGGATATGAGGCCGTTCATCCGGTGCACTCACTTTCTGAGCTCAA
GCGCCGCCTGGGACGCGGTCGGCGTTGCTTTGCTTTCTTCCACCCGTGCC
TGTCCGGGGAGCCCCTGGTCTTCCTCCACGTCGCCCTGCTGCCCGACATG
GCGAAGAGCATGGAAGACATCAGGGGGAGGGGAAGAGATAGAAGCGGCCG
CCGCGAGGATGCGGAAGAGCGGGGATGTAGCGAGAGACATAAACGTTCGA
TGTAGCGAGAGACATAAACGTTCGTCTCGATGTGCTGTATTTTATTCCAT
AACGTCAACGCAGAAAGGCCTTCAGGGAGTACAGCTCGGCAACTTCCTCA
TCAAAAGGGTGGTGTCGGAGCTGAGAGCGGAGCTACCGCAGGTGTCTCGA
TGTGCTGTATTTTATTCCATAACGTCAACGCAGAAAGGCCTTCAGGGAGT
ACAGCTCGGCAACTTCCTCATCAAAAGGGTGGTGTCGGAGCTGAGAGCGG
AGCTACCGCAGGTG
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