prot_H-elongata_contig86086.16185.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86086.16185.1
Unique Nameprot_H-elongata_contig86086.16185.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length222
Homology
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: D8LBL0_ECTSI (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL0_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 6.110e-110
Identity = 167/211 (79.15%), Postives = 186/211 (88.15%), Query Frame = 0
Query:   12 MRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNSTRLHTSAASVVVMMEAE 222
            MR+RLE MKGRH+EIVESMT G VPVR+MG+VGKELGRLE VL+ QA V  KA+EI DLEEVM  +NA G E DREM+ IAKEE  +C + LE LRL+LTSLLLPRDE DSKNALLEVRSG+GGDEAA FA++LFEMYRRFAELKGW+FEG+ CS+ID GGYREA+ASIRGEDVYGSLK+ENGVHRVQRVPSNS RLHTSAASVVVMMEAE
Sbjct:    1 MRQRLEHMKGRHEEIVESMTKGEVPVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEVMQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFENGVHRVQRVPSNSPRLHTSAASVVVMMEAE 211          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A651FQP8_9PROT (Peptide chain release factor 1 n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A651FQP8_9PROT)

HSP 1 Score: 182 bits (462), Expect = 1.200e-52
Identity = 98/215 (45.58%), Postives = 139/215 (64.65%), Query Frame = 0
Query:   10 SSMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            SS   +L+Q+  RH+E+   M+ G++   D  A+ +E   L  V EK  A  A  SEI DL+ ++     A  ET+ EM  +A++E       L  L  ++   LLP+DEAD+KNA+LE+R+GTGG+EAA+FA DLF MYR +A ++GW+FE +  S  D+GGY+E   S+ G +V+  LKYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    4 SSFAHKLDQVLARHQELSALMSTGSLSSEDFTAMSREYAELSPVAEKIEAYKAAQSEIDDLKTLL-----AEAETEGEMRQMAEDELYALEKTLPDLEQDIRIALLPKDEADTKNAILEIRAGTGGEEAALFAADLFAMYRGYATIQGWRFEIMEASESDIGGYKEVIVSVSGTNVFARLKYESGVHRVQRVPKTESGGRVHTSAATVAVLPEAE 213          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A437QN19_9PROT (Peptide chain release factor 1 n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QN19_9PROT)

HSP 1 Score: 178 bits (452), Expect = 3.740e-51
Identity = 93/214 (43.46%), Postives = 139/214 (64.95%), Query Frame = 0
Query:   11 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            S R+RL+++  R +E+ + M  G +  ++  A+ KE   +  ++EK  A  +   E +DLEE++     A   TD EM  +A+EE  +    L  +  +L  +LLP+DEAD++N ++E+R+GTGGDEAA+FA DL+ MY+++A L GW+ E +  S  D+GGY +  ASI G DVY  +KYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    2 SWRDRLQRVTARAQELSDRMAAGNLDAQEFTALSKEYADISPIVEKIEAFQSAEQERADLEELL-----ADKSTDAEMREMAREEANDLKERLPEIEHQLQLMLLPKDEADARNVIIEIRAGTGGDEAALFAGDLYRMYQKYAALNGWRMEAIDISENDIGGYSQIVASISGGDVYARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A2E5PI74_9PROT (Peptide chain release factor 1 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PI74_9PROT)

HSP 1 Score: 177 bits (450), Expect = 6.410e-51
Identity = 96/214 (44.86%), Postives = 141/214 (65.89%), Query Frame = 0
Query:   11 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            SM ER + +  RH+E+   M+ G +   +  A+  E   L  ++EK  ++ A  SE+ DL E+        V+ D EM  +A+ E +   + L  L  EL  +LLP+D ADSKNA+LEVR+GTGGDEA++FA +LF MY+R+A+++GW+FE +  S  ++GGY+EA+A I G  V+  LK+E+GVHRVQRVP+  +  R+HTSAA+V V+ EAE
Sbjct:    2 SMEERFDSLIMRHEELAALMSTGDLEPSEFTALSVEYAELSPIVEKVQSLKAARSELEDLVEL-------SVDGDLEMKELAETEARVLKAKLPDLEQELRVMLLPKDAADSKNAILEVRAGTGGDEASLFAAELFRMYQRYADIQGWRFEPMSISDTELGGYKEASALISGRGVFARLKFESGVHRVQRVPATESGGRVHTSAATVAVLPEAE 208          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: G8AT31_9PROT (Peptide chain release factor 1 n=29 Tax=Azospirillaceae TaxID=2829815 RepID=G8AT31_9PROT)

HSP 1 Score: 176 bits (447), Expect = 1.890e-50
Identity = 98/214 (45.79%), Postives = 141/214 (65.89%), Query Frame = 0
Query:   11 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            S+ E+  ++  RH E+ ++M  GTV   D   + KE   L  V E  A +    +E +DL  +  +++ AG   D +M ++A+EE  +    + +L   +   LLP+DEAD KNA+LEVR+GTGGDEAA+FA +LFEMYRR+A L+GW+FE +  S   +GGY+EA A+I G +V+  LK+E+GVHRVQRVP+  T  R+HTSAA+V V+ EAE
Sbjct:    2 SLDEKFNRVVARHDELRDAMAAGTVDPADFARLSKEYADLTPVAEAIAELKKAKAEAADLAGM--IADPAG---DADMKALAEEEFGDLTRRIPALERRVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLQGWRFETMEVSETGIGGYKEAIANITGRNVFARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A6M8VLF0_9PROT (Peptide chain release factor 1 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VLF0_9PROT)

HSP 1 Score: 176 bits (447), Expect = 1.980e-50
Identity = 96/214 (44.86%), Postives = 138/214 (64.49%), Query Frame = 0
Query:   11 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            S   +LEQ+  RH+E+   M+ GT    +  ++ +E   L  + EK  +  + A E +DLE   G+    G+  D++M  +A+EE       L  L  ++   LLP+DEAD+KNA+LE+R+GTGGDEAA+FA DLF+MYR +A L+GW+FE +  S  D+GGY+E   SI G +V+  LK+E+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    5 SFHRKLEQVLARHQELTALMSEGTASSEEFVSMSREYAELSPIAEKIESYQSAAGEAADLE---GMIADPGM--DKDMRDMAEEELYALQKKLPDLEHDIRIALLPKDEADAKNAILEIRAGTGGDEAALFASDLFDMYRGYAGLRGWRFEIMEASESDIGGYKEVIVSITGTNVFARLKFESGVHRVQRVPKTESGGRIHTSAATVAVLPEAE 213          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A3D9HEZ6_9PROT (Peptide chain release factor 1 n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HEZ6_9PROT)

HSP 1 Score: 176 bits (445), Expect = 3.940e-50
Identity = 96/210 (45.71%), Postives = 136/210 (64.76%), Query Frame = 0
Query:   15 RLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            RL+++  RH+E+ +++  G        A+ KE   L  ++EK AA  A   E+SDLEE++     A  + D EM  +A+EE Q     L  L  +L   LLP+D+ADS+NA+LE+R+GTGGDEAA+FA DLF MY+R+A   GW+ E +  S  ++GG+ +  AS+ G DV+  LKYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    6 RLDRVVARHQELSDTLASGQAEGDAFVALSKEFAELSPIVEKVAAFKAAQQELSDLEEMV-----ADPDADAEMKELAEEELQTLNEQLPDLEHQLQLALLPKDQADSRNAILEIRAGTGGDEAALFAGDLFRMYQRYAANHGWRVELIEESANEIGGFSQVVASVSGSDVFKRLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: UPI0004296B1D (peptide chain release factor 1 n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004296B1D)

HSP 1 Score: 173 bits (439), Expect = 3.020e-49
Identity = 96/214 (44.86%), Postives = 136/214 (63.55%), Query Frame = 0
Query:   11 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            S+ E  +++  RH E+ ++++ GT    +   + +E   L  V E   A+    +E +DL  +     AA    D EM ++A EE +E    L +L   +   LLPRDEAD KNA+LEVR+GTGG+EAA+FA +LFEMYRR+A L GW+FE +  S   +GGY+EA A+I G +V+  LK+E+GVHRVQRVP+     R+HTSAA+V V+ EAE
Sbjct:    2 SLEETFDRVLARHDELRDALSAGTADSGEFARLSREYAELTPVAEAIGALKKARAETADLAAM-----AADPAADAEMRALAAEELRELEGRLPALERTVQVALLPRDEADEKNAILEVRAGTGGEEAALFAAELFEMYRRYAGLHGWRFETMEVSETGLGGYKEAIANITGRNVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A7W1AWP7_9HYPH (Peptide chain release factor 1 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W1AWP7_9HYPH)

HSP 1 Score: 173 bits (438), Expect = 4.690e-49
Identity = 97/212 (45.75%), Postives = 140/212 (66.04%), Query Frame = 0
Query:   14 ERLEQMKGRHKEIVESMTVGTVPVRDMGA-VGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            ERL  +  RH+ +   +  G  P RD    + +EL  L+ V EK  A+S   +E++++E ++     A   T+R+M ++A++ER      +E++R EL  LL+PRD AD ++A+LEVR+GTGGDEA +FA +LF MY R+A LKGW+ E L  S  ++GGYRE  A++RG  VY  LK+E+GVHRVQRVP+     R+HTSAA+V V+ EAE
Sbjct:    8 ERLRSLIHRHEAVNAMLAAG--PARDEYVRLSRELAELDPVAEKARALSVVEAELAEMEALI-----ADAATERDMRALAEDERLALREKIEAIRGELRVLLVPRDAADDRSAILEVRAGTGGDEAGLFAGNLFRMYERYAALKGWRIEALSASEGEMGGYREIVAAVRGVGVYARLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEAE 212          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: UPI001D0223BF (peptide chain release factor 1 n=1 Tax=Nisaea sediminum TaxID=2775867 RepID=UPI001D0223BF)

HSP 1 Score: 172 bits (437), Expect = 5.170e-49
Identity = 99/214 (46.26%), Postives = 133/214 (62.15%), Query Frame = 0
Query:   12 MRERLEQMKGRHKEIVESMTVGT-VPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 222
            M+  LE++  RHKE+   +  G  V  +D+  + +EL  L  V EK   +     E+ D         A G+  D +M  +A EE +     L +L  E+  LLLP+DEAD KNA+LEVR+GTGGDEAA+FA DLF MY+R+A  KGW+FE +  S  D+GGY+EA A I G  V+  LK+E+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    1 MQANLERVLARHKELEAMLASGNGVASQDIAKLSRELSELAPVAEKVTELKEMRKELED---------ARGLLEDPDMEDMATEEIERLEKELPALEREVQILLLPKDEADEKNAILEVRAGTGGDEAALFASDLFGMYQRYAAQKGWKFEIMEISENDIGGYKEAIAEISGRSVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL0_ECTSI6.110e-11079.15RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A651FQP8_9PROT1.200e-5245.58Peptide chain release factor 1 n=1 Tax=Micavibrio ... [more]
A0A437QN19_9PROT3.740e-5143.46Peptide chain release factor 1 n=1 Tax=Hwanghaeell... [more]
A0A2E5PI74_9PROT6.410e-5144.86Peptide chain release factor 1 n=1 Tax=Rhodospiril... [more]
G8AT31_9PROT1.890e-5045.79Peptide chain release factor 1 n=29 Tax=Azospirill... [more]
A0A6M8VLF0_9PROT1.980e-5044.86Peptide chain release factor 1 n=1 Tax=Proteobacte... [more]
A0A3D9HEZ6_9PROT3.940e-5045.71Peptide chain release factor 1 n=1 Tax=Aestuariisp... [more]
UPI0004296B1D3.020e-4944.86peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A7W1AWP7_9HYPH4.690e-4945.75Peptide chain release factor 1 n=1 Tax=Hyphomicrob... [more]
UPI001D0223BF5.170e-4946.26peptide chain release factor 1 n=1 Tax=Nisaea sedi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 79..192
e-value: 5.5E-45
score: 165.4
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 22..215
e-value: 7.0E-53
score: 179.4
NoneNo IPR availableGENE3D3.30.70.1660coord: 121..222
e-value: 8.9E-39
score: 134.8
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 5..221
NoneNo IPR availablePANTHERPTHR43804:SF7PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATEDcoord: 5..221
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 83..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86086contigH-elongata_contig86086:449..2730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86086.16185.1mRNA_H-elongata_contig86086.16185.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86086 449..2730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86086.16185.1 ID=prot_H-elongata_contig86086.16185.1|Name=mRNA_H-elongata_contig86086.16185.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
SSEEAAWLPSSMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRL
EVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECV
SVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYR
RFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQR
VPSNSTRLHTSAASVVVMMEAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF