prot_H-elongata_contig86026.16183.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86026.16183.1
Unique Nameprot_H-elongata_contig86026.16183.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Match: D7FYU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU6_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.100e-55
Identity = 86/118 (72.88%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    1 RKKRGIAVKFVQETPGGYICDVDVRNFRTNSSHRIVMSKDQLKNISELVGKQVEVPALSMYTLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHDDVLDKIVELCKQAPDLSE 118
            +KKR I V+FVQETP GYI  VDV+NF+  ++HRIVMSK+QL   SEL GK+VEV  L  Y +KYMLDKG+KLDNTEGMI+ASVFPVNYFTLKQL+YFHDDV +KIV LCK+APDLSE
Sbjct:   16 KKKRSITVQFVQETPAGYISVVDVKNFKATTNHRIVMSKEQLAQYSELAGKKVEVGDLMGYVMKYMLDKGIKLDNTEGMIEASVFPVNYFTLKQLSYFHDDVEEKIVALCKEAPDLSE 133          
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Match: A0A835YV54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV54_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.370e-27
Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    6 IAVKFVQETPGGYICDVDVRNFRTNSSHRIVMSKDQLKNISELVGKQVEVPALSMYTLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHDDVLDKIVE 108
            + +  +QET GG+I  ++V  FRT ++H+I+++K  L+++SE  GK V+V  +  + +++M+DK M LDNTEGMIDA VFPVNYFT  QL  FH ++ DK+ E
Sbjct:   68 VKIAGMQETAGGFISHLEVHIFRTVTTHKIIIAKANLQDLSERTGKPVDVEQVLKHIVEFMVDKKMPLDNTEGMIDAGVFPVNYFTAGQLAQFHPELWDKLAE 170          
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Match: W7TI06_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI06_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.740e-18
Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    1 RKKRGIAVKFVQETPGGYICDVDVRNFRTNSSHRIVMSKDQLKNISELVGKQV-EVPALSMY--TLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHDDVLDKI 106
            R +R I +  V E+ GGY+  V+V+NF+  + H ++ SK+  +    L GK   E+P    Y    K+++ KG+ L  TEGMIDA VFP+NYF++ QL  F DD ++ +
Sbjct:   63 RPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGV 171          
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Match: A0A7S1K9Y0_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K9Y0_9ALVE)

HSP 1 Score: 80.1 bits (196), Expect = 9.130e-16
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    6 IAVKFVQETPGGYICDV--DVRNFRTNSSHRIVMSKDQLKNISELVGKQVEVPALSMYTLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHDDVLDKIVEL 109
            I V++V E  GG++ DV  D    +T + H + +      ++     ++V+   L  Y  K+MLD+ M +DNTEGMID+SVFPVNYF+  Q+ Y H+D  D++ ++
Sbjct:  146 IKVEYVDEWNGGWMSDVVIDYGGGKT-TKHTVTVGFFLYNDVVTKANREVDPETLVKYIFKFMLDRKMSMDNTEGMIDSSVFPVNYFSAAQVEYVHEDFRDRLADM 250          
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Match: A0A0G4H3W5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3W5_VITBC)

HSP 1 Score: 80.1 bits (196), Expect = 4.200e-15
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    6 IAVKFVQETPGGYICDV--DVRNFRTNSSHRIVMSKDQLKNISELVGKQVEVPALSMYTLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHDDVLDKIVEL 109
            I V++V E  GG++ DV  D    +T + H + +      ++     ++V+   L  Y  K+MLD+ M +DNTEGMID+SVFPVNYF+  Q+ Y H+D  D++ ++
Sbjct:  465 IKVEYVDEWNGGWMSDVVIDYGGGKT-TKHTVTVGFFLYNDVVTKANREVDPETLVKYIFKFMLDRKMSMDNTEGMIDSSVFPVNYFSAAQVEYVHEDFRDRLADM 569          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86026.16183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FYU6_ECTSI1.100e-5572.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV54_9STRA6.370e-2747.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TI06_9STRA4.740e-1839.45Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1K9Y0_9ALVE9.130e-1637.74Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0G4H3W5_VITBC4.200e-1537.74Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86026contigH-elongata_contig86026:1682..2646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86026.16183.1mRNA_H-elongata_contig86026.16183.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86026 1682..2646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86026.16183.1 ID=prot_H-elongata_contig86026.16183.1|Name=mRNA_H-elongata_contig86026.16183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
RKKRGIAVKFVQETPGGYICDVDVRNFRTNSSHRIVMSKDQLKNISELVG
KQVEVPALSMYTLKYMLDKGMKLDNTEGMIDASVFPVNYFTLKQLTYFHD
DVLDKIVELCKQAPDLSEW*
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