prot_H-elongata_contig8601.16182.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8601.16182.1
Unique Nameprot_H-elongata_contig8601.16182.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
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BLAST of mRNA_H-elongata_contig8601.16182.1 vs. uniprot
Match: D7G1B1_ECTSI (Calmodulin-like myosin-light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B1_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 3.010e-63
Identity = 128/226 (56.64%), Postives = 154/226 (68.14%), Query Frame = 0 
Query:    2 PLDLSRAH-PTLTLAARAADTLADALACGDPATIDHLENYGLXXXXXXXXKVSVNHIRDSRRLGVEDVHLLQTYHTGRRARIKLLDRVLSQS---------HRGLQEQVIVSGLVEFIVRDMLPDCETTEVINARLPTSFIRHNGTPLVRDEGIALMERVLMRRRRSPAVAREMARQTVRHTLPAAECDRLRQLRLRSVRAGVSKCLRYLTCLDSAPVDNALTIAG 217
            P  ++RAH      A  A DTLA+ALA GD  T+D +EN+GL        + S    R+SRRLGVE+VHLL+TY  GR AR+KL DR+L             RGLQ Q+IVSGLVEFI  +MLPDC  T++++ RLP +F+R+NGTPLVR+EGIA +ERV+ RR   PAVARE ARQ VRH LP AEC RLR  R RSVRAGVS CLR L  L+S PVD AL +AG
Sbjct: 5384 PPGVARAHWGARGPAVGATDTLAEALAHGDRETVDAMENHGLGVRLGQAVEASTRLTRESRRLGVEEVHLLRTYPAGRLARVKLFDRILCHRGDRGGXXXXXRGLQAQLIVSGLVEFIAINMLPDCAVTDIVSTRLPAAFVRYNGTPLVRNEGIAFLERVVARRAGCPAVARETARQAVRHGLPPAECTRLRGNRHRSVRAGVSACLRCLARLESPPVDRALKLAG 5609
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BLAST of mRNA_H-elongata_contig8601.16182.1 vs. uniprot
Match: A0A6H5KGH7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH7_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.030e-60
Identity = 120/201 (59.70%), Postives = 144/201 (71.64%), Query Frame = 0 
Query:    3 LDLSRAHPTLTLAARAADTLADALACGDPATIDHLENYGLXXXXXXXXKVSVNHIRDSRRLGVEDVHLLQTYHTGRRARIKLLDRVLS-QSHRG------LQEQVIVSGLVEFIVRDMLPDCETTEVINARLPTSFIRHNGTPLVRDEGIALMERVLMRRRRSPAVAREMARQTVRHTLPAAECDRLRQLRLRSVRAGVSK 196
            LDL RAHP  TLA  A DTLA+ALA GD  T+D +EN+GL        + S    R+SRRLGVE+VHLL+TY  GR AR+KL DR+L  Q  RG      LQ Q+I+SGLVEFI  +MLPDC  T++++ RLP +F+RHNGTPLVR+EGIA +ERV+ RR   PAVARE ARQ VRH LP AEC RLR+ R RSVRAG S+
Sbjct: 1935 LDLYRAHPIPTLAVGATDTLAEALAHGDRETVDAMENHGLGVRLGLAVEASTRLTRESRRLGVEEVHLLRTYPAGRLARVKLFDRILCHQGGRGGGGGRELQAQLIISGLVEFITSNMLPDCAVTDIVSTRLPAAFVRHNGTPLVRNEGIAFLERVVARRAGCPAVAREAARQAVRHGLPPAECTRLRENRHRSVRAGASR 2135
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8601.16182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1B1_ECTSI3.010e-6356.64Calmodulin-like myosin-light chain n=1 Tax=Ectocar... [more]
A0A6H5KGH7_9PHAE1.030e-6059.70Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8601contigH-elongata_contig8601:7261..7911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8601.16182.1mRNA_H-elongata_contig8601.16182.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8601 7261..7911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8601.16182.1 ID=prot_H-elongata_contig8601.16182.1|Name=mRNA_H-elongata_contig8601.16182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
MPLDLSRAHPTLTLAARAADTLADALACGDPATIDHLENYGLGLGLGLAV
KVSVNHIRDSRRLGVEDVHLLQTYHTGRRARIKLLDRVLSQSHRGLQEQV
IVSGLVEFIVRDMLPDCETTEVINARLPTSFIRHNGTPLVRDEGIALMER
VLMRRRRSPAVAREMARQTVRHTLPAAECDRLRQLRLRSVRAGVSKCLRY
LTCLDSAPVDNALTIAG
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