prot_H-elongata_contig85873.16170.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85873.16170.1
Unique Nameprot_H-elongata_contig85873.16170.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A6H5KXE2_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXE2_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 6.810e-21
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +G T FAAG+WIGVELDL+EGKNDG VNGVQYFD R GHGLFVKKAQV
Sbjct:   26 IGPTDFAAGEWIGVELDLQEGKNDGLVNGVQYFDCREGHGLFVKKAQV 73          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: D8LH61_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH61_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 5.920e-19
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +G T FAAG+WIGVELDL+EGKNDG VNGVQYFD R GHGLFVKKAQV
Sbjct:   26 IGPTDFAAGEWIGVELDLQEGKNDGLVNGVQYFDCREGHGLFVKKAQV 73          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A812KX20_9DINO (Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812KX20_9DINO)

HSP 1 Score: 73.6 bits (179), Expect = 3.980e-15
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTTQFAAG WIGVELD  +GKNDGT+ G +YFD ++GHG+F + A V
Sbjct:   51 VGTTQFAAGPWIGVELDTPDGKNDGTIQGERYFDCKAGHGIFARPAAV 98          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A813BQS5_9DINO (DCTN1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BQS5_9DINO)

HSP 1 Score: 73.6 bits (179), Expect = 1.380e-14
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTTQFAAG WIGVELD  +GKNDGT+ G +YFD ++GHG+F + A V
Sbjct:   36 VGTTQFAAGPWIGVELDTPDGKNDGTIQGERYFDCKAGHGIFARPAAV 83          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A1W0A174_9STRA (Glycoside hydrolase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A174_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.380e-14
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            MGTT+FA GDW+GVELD  EGKNDG +NGV+YF     +GLF KK+QV
Sbjct:   20 MGTTEFAQGDWVGVELDAPEGKNDGEINGVRYFQCEPNYGLFAKKSQV 67          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A812LWC4_9DINO (Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812LWC4_9DINO)

HSP 1 Score: 73.6 bits (179), Expect = 5.680e-14
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTTQFAAG WIGVELD  +GKNDGT+ G +YFD ++GHG+F + A V
Sbjct:  230 VGTTQFAAGPWIGVELDTPDGKNDGTIQGERYFDCKAGHGIFARPAAV 277          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A067CIY9_SAPPC (CAP-Gly domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIY9_SAPPC)

HSP 1 Score: 72.4 bits (176), Expect = 1.550e-13
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTT+FA GDW+GVELD  EGKNDG +NGV+YF      GLF KK+QV
Sbjct:   20 LGTTEFAQGDWVGVELDAPEGKNDGEINGVRYFQCEPNFGLFAKKSQV 67          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A1V9Z688_9STRA (Glycoside hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z688_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.950e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTT+FA GDW+GVELD  +GKNDG +NGV+YF     +GLF KK+QV
Sbjct:   20 LGTTEFAQGDWVGVELDGPDGKNDGEINGVRYFQCEPNYGLFAKKSQV 67          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A1S8VPP8_9FUNG (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VPP8_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 3.960e-13
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            +GTTQFA G W+GVEL   EGKNDG+VNG  YF+  SGHG+FV+ +QV
Sbjct:   60 VGTTQFATGVWVGVELPSPEGKNDGSVNGTSYFECTSGHGIFVRVSQV 107          
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Match: A0A485LS03_9STRA (Aste57867_25002 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS03_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.400e-13
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQV 48
            MGTT FA GDW+G+ELD  +GKNDG +NGV+YF      GLF KK+QV
Sbjct:   20 MGTTDFAQGDWVGIELDTPDGKNDGEINGVRYFTCEPSFGLFAKKSQV 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85873.16170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXE2_9PHAE6.810e-2183.33CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D8LH61_ECTSI5.920e-1983.33CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A812KX20_9DINO3.980e-1564.58Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A813BQS5_9DINO1.380e-1464.58DCTN1 protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A1W0A174_9STRA2.380e-1466.67Glycoside hydrolase n=1 Tax=Thraustotheca clavata ... [more]
A0A812LWC4_9DINO5.680e-1464.58Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A067CIY9_SAPPC1.550e-1364.58CAP-Gly domain-containing protein n=2 Tax=Saproleg... [more]
A0A1V9Z688_9STRA3.950e-1362.50Glycoside hydrolase n=1 Tax=Achlya hypogyna TaxID=... [more]
A0A1S8VPP8_9FUNG3.960e-1364.58CAP-Gly domain-containing protein (Fragment) n=1 T... [more]
A0A485LS03_9STRA5.400e-1362.50Aste57867_25002 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 1..49
e-value: 5.1E-12
score: 55.9
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 1..48
e-value: 3.9E-17
score: 62.0
IPR000938CAP Gly-rich domainPROSITEPS00845CAP_GLY_1coord: 2..33
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 2..44
score: 16.117
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 1..52
e-value: 1.0E-19
score: 71.7
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 1..50
NoneNo IPR availablePANTHERPTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGcoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85873contigH-elongata_contig85873:193..351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85873.16170.1mRNA_H-elongata_contig85873.16170.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85873 193..360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85873.16170.1 ID=prot_H-elongata_contig85873.16170.1|Name=mRNA_H-elongata_contig85873.16170.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MGTTQFAAGDWIGVELDLEEGKNDGTVNGVQYFDGRSGHGLFVKKAQVTT
CS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
IPR036859CAP-Gly_dom_sf