mRNA_H-elongata_contig85724.16157.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: D8LSY4_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY4_ECTSI) HSP 1 Score: 245 bits (626), Expect = 4.350e-80 Identity = 132/142 (92.96%), Postives = 137/142 (96.48%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPV 426
VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVG LQLLGMRHLVRLLGKH+MLIAGN+ LAAGMVGVA R+PVVHFALFT HIMGYSLADTALVALISRY+SPAT+GRSLGLNQAAQSMARVVSPV
Sbjct: 39 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLIAGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV 180
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A6H5L781_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L781_9PHAE) HSP 1 Score: 245 bits (626), Expect = 2.450e-74 Identity = 132/143 (92.31%), Postives = 137/143 (95.80%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVG LQLLGMRHLVRLLGKH+MLI GN+ LAAGMVGVA R+PVVHFALFT HIMGYSLADTALVALISRY+SPAT+GRSLGLNQAAQSMARVVSPVV
Sbjct: 579 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVV 721
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A836CM96_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM96_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.780e-55 Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
V+LL NGFLL+YAFSIETIYAMF+KDNFGYG + LS +FA+NGV VG LQL+ MRHLV +GKH++L +GN+LLA GM+G++L R +HF LF+ HI+GYS+ADTALV+LISRY+ +GRSLGLNQAAQS ARV+SP+V
Sbjct: 35 VLLLAMNGFLLVYAFSIETIYAMFMKDNFGYGHATLSTLFAVNGVLVGFLQLVLMRHLVAKMGKHMLLASGNLLLALGMLGLSLVRYTPLHFLLFSVHILGYSMADTALVSLISRYAGSNAQGRSLGLNQAAQSTARVISPLV 177
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A7S3UWB2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB2_HETAK) HSP 1 Score: 191 bits (484), Expect = 3.520e-55 Identity = 96/143 (67.13%), Postives = 122/143 (85.31%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
V+LL GNGFLLMYAF++ET+YA FLKDNFGYGESVL+ +F LNG++VG LQ+ ++ LV LGKH++L+ GN LLAAGMVG+AL R P+VHFA+F+ HI+GY++ADTAL +LISRYSSP T+G LGLNQA QS AR++SP+V
Sbjct: 336 VLLLTGNGFLLMYAFAVETVYAAFLKDNFGYGESVLATLFVLNGMSVGMLQVFFIKKLVNKLGKHMLLVLGNALLAAGMVGLALIRQPLVHFAMFSVHILGYAIADTALSSLISRYSSPDTQGTHLGLNQAVQSFARMISPLV 478
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A4D9D6H6_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H6_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.340e-48 Identity = 89/143 (62.24%), Postives = 118/143 (82.52%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
V LL+ NGFLLMYAFS+ET+YAMF+KDNFGYGE+ L VFALNG+AVG LQ+ +++L LGKHVML GN+LLA GMVG++L R + HF++F+ HI+GY+++DTAL +LISRYS+P +GR+LG + AAQS AR++SP+V
Sbjct: 426 VRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLV 568
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A482SL66_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL66_9ARCH) HSP 1 Score: 167 bits (422), Expect = 2.340e-46 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 1 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
V+LLV NGF +MYAF+ ETIYAMF+KD+FGYGE LS +FA+NG +G Q+ ++ L+ +LGKH L GN LLA GM+GVAL R +HF LF H++GYS+ADTAL +LI++YSSPA +GR L LNQA QS ARVVSP++
Sbjct: 332 VLLLVLNGFSIMYAFATETIYAMFIKDSFGYGEQALSTLFAVNGFFIGVFQVFLIKPLIHMLGKHATLAFGNFLLALGMIGVALVRERTLHFLLFALHVVGYSIADTALASLITKYSSPANQGRDLALNQACQSCARVVSPLL 474
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: K8YQK8_NANGC (Major facilitator superfamily mfs 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQK8_NANGC) HSP 1 Score: 137 bits (344), Expect = 2.630e-38 Identity = 69/118 (58.47%), Postives = 95/118 (80.51%), Query Frame = 1
Query: 76 KDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
+DNFGYGE+ L VFALNG+AVG LQ+ +++L LGKHVML GN+LLA GMVG++L R + HF++F+ HI+GY+++DTAL +LISRYS+P +GR+LG + AAQS AR++SP+V
Sbjct: 4 RDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLV 121
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A7S1UC38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC38_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.050e-26 Identity = 56/143 (39.16%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 7 LLVGNGFLLMYAFS--IETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPVV 429
LL+ N M+A S I+ +YA+FLK+ FG LS ++A NG+ VG L + ++H+VR LG H+ML+A NV+ + G+ +A+++ +HFA F +I +SL D A V+L++ Y + GR G+ A SMAR+ +P +
Sbjct: 261 LLLANSMFTMFALSGCIDGVYAVFLKERFGLASKALSGIYAFNGLLVGCLNVFALKHMVRALGSHMMLVAANVIASVGLASIAMAQQTTLHFASFCLYITAFSLGDVAFVSLLTSYVDSSRIGRLFGMKVALDSMARIAAPAI 403
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A7Y3GCG5_9DELT (MFS transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GCG5_9DELT) HSP 1 Score: 62.0 bits (149), Expect = 1.830e-8 Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 28 LLMYAFSI-----ETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHIMGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPV 426
LL AFSI ET++A F+ D FGYG ++ +F V +G +Q GM+ L + ML AG++LLA + V L+ + V +G ++ ++++L+S + P RG LG Q+ S+ RVV PV
Sbjct: 225 LLNLAFSIAVVQLETVFAFFMNDRFGYGVFEVAWIFVGMAVLMGGIQGGGMKALSARFAEGQMLRAGSLLLAVSIAWVPLAGSVAVLLIPLAFSAVGRAVLQPSMMSLVSLRARPEHRGVVLGTFQSFASLGRVVGPV 362
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Match: A0A7C2SEX9_9DELT (MFS transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2SEX9_9DELT) HSP 1 Score: 58.9 bits (141), Expect = 2.120e-7 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 1
Query: 49 IETIYAMFLKDNFGY-GESVLSMVFALNGVAVGALQLLGMRHLVRLLGKHVMLIAGNVLLAAGMVGVALSRNPVVHFALFTAHI--MGYSLADTALVALISRYSSPATRGRSLGLNQAAQSMARVVSPV 426
+ET++A F+ D FGY E V + A+ V +GA+Q GM+ L + +++AG LLA G G L P V + L + +G ++ +L++L S S RG ++G QA+ S+ARVV P+
Sbjct: 201 LETVFAFFMADRFGYDAEHVAGFLIAM-AVLMGAIQGGGMKALSARFRERSLVVAGGALLAVGFAG--LPPVPSVAWLLLPLALCAVGRAILQPSLMSLASLASESGARGGTMGAFQASASLARVVGPI 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85724.16157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85724.16157.1 >prot_H-elongata_contig85724.16157.1 ID=prot_H-elongata_contig85724.16157.1|Name=mRNA_H-elongata_contig85724.16157.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp MLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGALQback to top mRNA from alignment at H-elongata_contig85724:679..2364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85724.16157.1 ID=mRNA_H-elongata_contig85724.16157.1|Name=mRNA_H-elongata_contig85724.16157.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1686bp|location=Sequence derived from alignment at H-elongata_contig85724:679..2364+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85724:679..2364+ >mRNA_H-elongata_contig85724.16157.1 ID=mRNA_H-elongata_contig85724.16157.1|Name=mRNA_H-elongata_contig85724.16157.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig85724:679..2364+ (Himanthalia elongata Himel1 dioecious)back to top |