prot_H-elongata_contig85636.16148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85636.16148.1
Unique Nameprot_H-elongata_contig85636.16148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length154
Homology
BLAST of mRNA_H-elongata_contig85636.16148.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.260e-58
Identity = 90/111 (81.08%), Postives = 101/111 (90.99%), Query Frame = 0
Query:    1 MLFQCEPGKHKDHIRIRSRATNTFLFFLGVKHPLTWVAWDRDVVGGDWEDLQLEWVGTPAGREGVLVGDERGRVVIHSRPMKAYVSWNGTRFTHVPNKEGATVFLFQRVAP 111
            MLFQ E G+H+DH+RIRSRATNTFLFFLG+K PLTWVAWDRDVVGG+WEDL+LEWVG P G +GVLVGDERGRVVI SRPMK YVSWNG+RFTHVP +EGATVF+ QR+AP
Sbjct:  624 MLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAP 734          
BLAST of mRNA_H-elongata_contig85636.16148.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.850e-27
Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    1 MLFQCEPGKHKDHIRIRSRATNTFLFFLGVKHPLTWVAWDRDVVGGDWEDLQLEWVGTPAGREGVLVGDERGRVVIHSRPMKAYVSWNGTRFTHVPNKEGATVFLFQ 107
            ++FQCEPG+   H+RIRSR +NT+LF LG++ PLT VAWDR+V GGDWED+++ W+            ++ GRV+I  +    Y+ W GT+F H P K+ A+ F+ Q
Sbjct:  501 LVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQ 598          
BLAST of mRNA_H-elongata_contig85636.16148.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.390e-24
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    1 MLFQCEPGKHKDHIRIRSRATNTFLFFLGVKHPLTWVAWDRDVVGGDWEDLQLEWVGTPAGREGVLVGDERGRVVIHSRPMKAYVSWNGTRFTHVPNKEGATVFLFQRV 109
            MLFQCEPG+   H+ +RSR TNT LF LG++ P T VAWDR+V GGDWED+++EW             +  G VVI  +    Y+ W G RF HV  ++ A+ F+ Q V
Sbjct:  415 MLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQGV 512          
BLAST of mRNA_H-elongata_contig85636.16148.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 5.180e-11
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MLFQCEPGKHKDHIRIRSRATNTFLFFLGVKHPLTWV 37
            MLFQ E G+H+ H+RIRSRATNTFLFFLG+K PLTWV
Sbjct:  423 MLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85636.16148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE1.260e-5881.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YVS8_9STRA1.850e-2745.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHV2_9STRA1.390e-2445.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC8_ECTSI5.180e-1178.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85636contigH-elongata_contig85636:169..1111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85636.16148.1mRNA_H-elongata_contig85636.16148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85636 142..1111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85636.16148.1 ID=prot_H-elongata_contig85636.16148.1|Name=mRNA_H-elongata_contig85636.16148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
MLFQCEPGKHKDHIRIRSRATNTFLFFLGVKHPLTWVAWDRDVVGGDWED
LQLEWVGTPAGREGVLVGDERGRVVIHSRPMKAYVSWNGTRFTHVPNKEG
ATVFLFQRVAPHPATSTGSSTSRLERRRRDESGGKEGVGREGSASGGTFG
GAG*
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