prot_H-elongata_contig8560.16146.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8560.16146.1
Unique Nameprot_H-elongata_contig8560.16146.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
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BLAST of mRNA_H-elongata_contig8560.16146.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.400e-24
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0 
Query:    1 MNKWVVSDPILKDQMGALEAIPKSYKNDAPGHNEMRNDDCLEAQEKLELSAEMMEFVGDEDVDGDVEV 68
            MNKWV SDP+L+ QMGALE IP+SY++DAPGHN++ +DD +EAQE+LELSAE ME +GDED DGD EV
Sbjct:  586 MNKWVASDPVLRGQMGALEEIPESYEDDAPGHNDIVHDDGVEAQEQLELSAEFMECMGDEDADGDAEV 653
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BLAST of mRNA_H-elongata_contig8560.16146.1 vs. uniprot
Match: A0A6H5L1L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L1_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.570e-9
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:   29 APGHNEMRNDDCLEAQEKLELSAEMMEFVGDEDVDGDVEV 68
            APGHN++ +DD +E QE+LELSAE+ME +GDED DGD EV
Sbjct:   58 APGHNDIVHDDGVEVQEQLELSAELMECMGDEDADGDAEV 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8560.16146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ25_ECTSI2.400e-2470.59Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5L1L1_9PHAE5.570e-967.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8560contigH-elongata_contig8560:3280..3486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8560.16146.1mRNA_H-elongata_contig8560.16146.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8560 3280..5263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8560.16146.1 ID=prot_H-elongata_contig8560.16146.1|Name=mRNA_H-elongata_contig8560.16146.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
MNKWVVSDPILKDQMGALEAIPKSYKNDAPGHNEMRNDDCLEAQEKLELS
AEMMEFVGDEDVDGDVEV*
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