prot_H-elongata_contig8557.16145.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8557.16145.1
Unique Nameprot_H-elongata_contig8557.16145.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length663
Homology
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: D7FQY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY1_ECTSI)

HSP 1 Score: 715 bits (1845), Expect = 2.140e-248
Identity = 381/685 (55.62%), Postives = 490/685 (71.53%), Query Frame = 0
Query:    1 MFEEKYGSATMVTEKWFREVCAA-KQTLPEVVVLTAASAKIVAGAFVRAGISNVIAVETSEANTVALDFIRVFYTKLAQGQTVQTSFDEALRSIPHHDQKRCLLLPDNEDHGVSPFDDASSTGFINHIQRLPRVLEVTPH-----FRGREIQVQEVYMYMVQPIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPLKDHATGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCNSSTKDVLLVLDGCPPYFVNKKMERITLSSVVERLGDRGASKLKFVITVVTQVGIAREKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRERHLLRYEDEYLKEIETNHWRYKCLEQEFAKKLEECTHTQSGFVIDGEWGGRQARLSPTPLNAALT------------ATGIATLKGAPLQLPTSLPA-RINLSDGEFWWNRAVERHSGKAGASAQTVPWKALCNHSLSQYFLDILGAEGRNRPLVEDEFQALANNAQLWHPHSHPGSVPGMVASRQGFLGSFWPWFKAATRSLKFTEYWGSQMYPVICGLSTTSVDGNKLLQGKPPGTFLLRLSSTELGALVVMFVKEHQKIGSILMKATSNP---GKFKMEYGNDGFMVATLRKLIMFIDCWTH 663
            +FE+  G A  VTE W +  C   K  LPE+VVLTAASAK+VAG F+RAGISNV+AV+TS  + V L F+R FY  LAQG T++ SFD  ++S+P   + RC+LLP N +H +SPFDDA S  F   +   P  ++++       FRGREI VQEVYM+MVQ  +VITI G+PGIGKT+VALRAC+YA ER LF ETFF+ L+D  TGTPIT   E+AARIA+AFG S++EI +H EGFLGCIQ+KC     D+LLVLDGC PYFVN++ E+I LSSVVE+L  R  S L++++TVVTQVGIA+EKVVNI RL +L AAELFVASA R++TVEELRGGMVV GP V+ +ECMRLFAG  IM+AL  HPGAIV++S  L + HLL  ED+YL++I     RY+ LEQEFA++L+EC  TQS  VI+ EWG +     P+  +++L                I   + A    P +L    +  ++GEFWW  A+E+H+G+ GA +QT+PW+ALC HSL+ YF+++LG EGR+RPL+ D+F AL NN  LW P+  PGSV G +ASRQ FLG+FWPWFKAAT  LK T  WG Q YPVICGLSTT  DG KLLQG+P GTFLLRLSS   GAL  M+VK  Q++G++L+K++++P    KF++EYG++  M+A L++LI  I  WTH
Sbjct:  101 IFEKPNGLAAPVTEDWLQNTCGGQKDKLPELVVLTAASAKLVAGVFIRAGISNVVAVDTSGDDAVTLSFVRSFYLSLAQGFTLRDSFDAGVQSLPDGQEDRCVLLPANGEHWLSPFDDAESGTFTYRVPHSPSKMKMSKKKKISSFRGREIPVQEVYMHMVQHSKVITISGRPGIGKTEVALRACEYARERCLFIETFFVSLQDKTTGTPITTLKEVAARIANAFGISKQEIQDHTEGFLGCIQHKCGLQKGDLLLVLDGCSPYFVNERDEKIKLSSVVEQLCPR-VSNLQYIVTVVTQVGIAKEKVVNIGRLGELAAAELFVASAPRKVTVEELRGGMVVSGPHVQLAECMRLFAGGVIMSALRRHPGAIVASSGMLEQWHLLTNEDDYLQDIAVQLQRYEKLEQEFARRLQECPQTQSDSVIEREWGRQSRPERPSRQSSSLVKDRCPPHHDPRRVPSIPRKQDASKSPPPALATTELRTTNGEFWWRLALEKHTGEVGAISQTIPWEALCRHSLASYFVEVLGDEGRDRPLLNDDFNALGNNPALWDPYRAPGSVQGGIASRQEFLGTFWPWFKAATLLLKRTGCWGFQKYPVICGLSTTRFDGMKLLQGRPAGTFLLRLSSKP-GALAAMYVKPMQELGNVLIKSSADPVNHRKFEIEYGSET-MIAPLKQLIEIIPKWTH 782          
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: A0A836CE12_9STRA (CHAT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE12_9STRA)

HSP 1 Score: 137 bits (345), Expect = 6.660e-30
Identity = 172/663 (25.94%), Postives = 261/663 (39.37%), Query Frame = 0
Query:   26 TLPEVVVLTAASAKIVAGAFVRAGISNVIAV--ETSEANTVALDFIRVFYTKLAQGQTVQTSFDEA-----LRSIPHHDQKRCLLLPDNEDHGVSPFDDASSTGFINHIQRLPR---VLEVTPHFRGREIQVQE-VYMYMVQPIRVITIRGKPGIGKTQVALRACKYAW-------------------------ERRLFGETFFIPLKDHATGTP--ITCFTELAARIAHAFGFS--------EEEICEHREGFLGCIQNKCNSSTKDVLLVLDGCPPYFVNKKMERITLSSVVERLGDRGA-SKLKFVITVVTQVGIAREKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRERHLLRYEDEYLKEIETNHWRYKCLEQEFAK--------KLE-ECTHTQSGFVIDGEWGGRQARLSPTPLNAALTATGIATLKGAPLQLPTSLPARINLSDGEF--WWNRAVERHSGKAGASAQTVPWKALCNHSLSQYFLDILGAEGRNRPLVEDEFQALANNAQLWHPHSHPGSVPGMVASRQGFLGSFWPWFKAATRSLKFTEYW------GSQMYPV------ICGLSTTSVDGNKLLQGKPPGTFLLRLSSTELGALVVMFVK 618
            ++P +V ++A  ++ VA  F+ AG+ +V+AV  + +  +  A+ F+  FY  L  G +V+ +F++A     L +  H +  +  LLP++  H   P    S  G      R P    ++    +F GREI VQ  V     Q  R + + G  G+GKTQ                                   +  +             T  P  +       A IA A  F         EE + E     LG        S + VLLVLDGC P+ V   +   TL + V+RL +  A  +L  V T +  VG   E+V+N++ L D+ AAE+F  +A R  +  EL  G    G  V  ++   +F+   I++ L G+PGAIV+ +Q L ER+LLR         + +  R + + ++ A         KLE +  H                         A     +  L G  +       A     +G     W                   W  LC   +  YF   LG    +RP   ++   L  + ++W P + P   P  V     F  SFWPW  AA R L+ +  W      GS    V      I GLS    D  ++L G  PGTFL R+S++ L  LV+  +K
Sbjct:  227 SIPRLVFISACYSETVASGFLSAGVPHVVAVCKDHTVKDREAVSFMNAFYEMLLSGDSVRQAFNKARDVLGLAAESHQEAAKFRLLPEDAAHDERPMRGVS-IGPYTDATRPPAPSTMVAAAGYFSGREINVQALVDAVQRQVARAVCVAGPSGVGKTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIAVXXXXXXXXXXXXVTAAPPDLPPSDPGPAAIAAALNFPLPPPPFNVEEALVEGVVLKLGAELGPGTGSGRPVLLVLDGCSPWLVRGAL---TLRAFVDRLLEVAALRRLCVVTTCIRPVGAQGERVINLEPLDDVRAAEVFCKAAPRAYSPAELMDGH---GTMV--ADLNLVFSRGQIVSLLKGNPGAIVAVTQSLHERNLLR---------DASFIRARLIPEKLATLAARDAKFKLELDDAHPXXXXXXXXXXXXXXXXXXXXXXXXA----DVRKLHGQQVWASVRRRASAVAVNGAVVNGWQNGSPSXXXXXXXXXWAPTWGQLCELGIVDYFRLRLGT---SRPPTPEDLAFLGKSGKIWDPFAAP-RAPHAVVQHAAFFESFWPWLWAAVRLLRASGLWCPSEGVGSPGRDVPALPRFILGLSDGLAD--RVLYGSVPGTFLFRISTSMLSTLVICHIK 861          
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: W7U5S9_9STRA (Sh2 domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5S9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.670e-23
Identity = 116/395 (29.37%), Postives = 188/395 (47.59%), Query Frame = 0
Query:    3 EEKYGSATMVTEKWFREVCAAKQTLPEVVVLTAASAKIVAGAFVRAGISNVIAV--ETSEANTVALDFIRVFYTKLAQGQTVQTSFDEALRSIPHH-----DQKRCLLLPDNEDHGVSPFDDASSTGFINHIQR-LPRVLEVTP-HFRGREIQVQEVY--MYMV-QPIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPL--KDHATGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCNSSTKDVLLVLDGCPPYFVNKKMERI-TLSSVVERLGDRGASKLKFVITVVTQVGIAR-----EKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRERHL 377
            E+  G   +++ +   E+ AA     ++V ++A  ++IV  AF+ AG+ +V+A+  +   ++  A  F   FY  +A G+TV+ +F+ A  +         + ++ LLLP + +H ++ FDDA    F++     +P   +  P  F GR +  QEV   + MV Q  R IT+RG+PG+GKT +A + C+Y  ER  F   + +PL  K++ +    T    + A I      +E EI      FL  +Q+K  S    V++VLDG P  F N+    +  LS ++ R+   G   L      V   G  R     EKVV++  LSD+  A +    A     +EE+     +  P     E     A S ++  L GHP AIV  +  L +  L
Sbjct:  149 EKPVGETNVLSIETLTELFAAGGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESPPPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIV-----FL--LQDKHPSGR--VIMVLDG-PDRFFNRSNSLVQVLSYLLSRI--HGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEM-----MSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL 526          
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: K8YZD6_NANGC (Sh2 domain containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZD6_NANGC)

HSP 1 Score: 111 bits (277), Expect = 1.300e-22
Identity = 111/369 (30.08%), Postives = 177/369 (47.97%), Query Frame = 0
Query:   29 EVVVLTAASAKIVAGAFVRAGISNVIAV--ETSEANTVALDFIRVFYTKLAQGQTVQTSFDEALRSIPHH-----DQKRCLLLPDNEDHGVSPFDDASSTGFINHIQR-LPRVLEVTP-HFRGREIQVQEVY--MYMV-QPIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPL--KDHATGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCNSSTKDVLLVLDGCPPYFVNKKMERI-TLSSVVERLGDRGASKLKFVITVVTQVGIAR-----EKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRERHL 377
            ++V ++A  ++IV  AF+ AG+ +V+A+  +   ++  A  F   FY  +A G+TV+ +F+ A  +         + ++ LLLP + +H ++ FDDA    F++     +P   +  P  F GR +  QEV   + MV Q  R IT+RG+PG+GKT +A + C+Y  ER  F   + +PL  K++ +    T    + A I      +E EI      FL  +Q+K  S    V++VLDG P  F N+    +  LS ++ R+   G   L      V   G  R     EKVV++  LSD+  A +    A     +EE+     +  P     E     A S ++  L GHP AIV  +  L +  L
Sbjct:   33 QLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESPPPVPNTCDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIV-----FL--LQDKHPSGR--VIMVLDG-PDRFFNRSNSLVQVLSYLLSRI--HGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEM-----MSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRL 384          
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: A0A8J5Y179_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y179_DIALT)

HSP 1 Score: 65.1 bits (157), Expect = 4.450e-7
Identity = 105/390 (26.92%), Postives = 170/390 (43.59%), Query Frame = 0
Query:   30 VVVLTAASAKIVAGAFVRAGISNVIAVETSEANTVALD---FIRVFYTKLAQGQTVQTSFDE-----ALRSIPH---------HDQKRCLLLPDNEDHGVSPFDDASSTGFINHIQRLPRVLEVT--PHFRGREIQVQEVYMYMVQ----PIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPLKDHATGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCNSSTKDV---------LLVLDGCPPYFVNKKMERITLSSVVERLGDR--GASKLKFVIT----VVTQVG--IAREKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRERHLLR 379
            VVVL A  +     AFV AG  +V+A+  S+A  +  D   F R F   L QGQ+V+++F+      A  + P           + ++ +LLP+   H   P   A   G +  +  LP +   T    F GR ++VQ +   + +     +R++T+ G+ G+GKT ++    ++ W+RR         L+D A       F EL+       G S EE+     G LG   +      KD          ++VLDG     V++ ++   L ++V+R+       S+L+ ++T    + T +G  +A E  V ID+L +LDAA L  A  S  L               +R +  +R  A   I T L G P  I   +  +R+   LR
Sbjct:  293 VVVLGACHSLDAGRAFVAAGCKHVVAI-ASDAKVLDDDAALFARHFLFALFQGQSVRSAFERGKGVVASAANPRVSEPTNQRAFEAEKIVLLPEGAPHDERPMS-ALLRGELFEVNPLPALEPPTVPSPFVGRALEVQALVRMLRRRRQSEVRLVTLWGERGVGKTALSKAVAQFLWQRR--------HLQDGAA------FVELS-------GVSSEEMAL---GALGDALDMEFGRWKDASRALHRWHGVVVLDG-----VDELLQ--ALPAIVQRMVSAVLHGSQLQVIVTSCVPLSTAIGAEMAVEHPVRIDKLHELDAARLLHALVSDALPAH------------LRGTANLRALAQHEIFTHLDGLPRRIAQTAPHIRQGMSLR 637          
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Match: A0A0M0JJX5_9EUKA (AAA domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJX5_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 8.520e-5
Identity = 101/398 (25.38%), Postives = 154/398 (38.69%), Query Frame = 0
Query:   42 AGAFVRAGISNVIAVET--SEANTVALDFIRVFYTKLAQGQTVQTSFDEALRSI-----------PHHDQKRCLLLP----------------------------------DNEDHGVSPFDDASSTGFINHIQRLPRVLEVTPH--FRGREIQVQEVYMYMVQ----PIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPLKDHATGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCN---SSTKDV---------LLVLDGCPPYFVNKKMERITLSSVVERLGDRGASKLKFVITVVTQVGIAREKVVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFAGSAIMTALGGHPGAIVSASQRLRE 374
            A AFV AG+ +VIAV T     +  A  F R  Y  L +G TV+ +FD A   +           P  + ++ +LLP                                  D + HGV P   +   G +     LP +     H  F GR I +Q++ + + Q     +R++T+ G  G+GK+ +AL A  + +ERR F E                       R+       E + CE   G LG +    +   SS  DV         LLVLD C        M     + ++++L      +L+ + T    + +A E +   D L   DAA LF     REL +E    G+ +  P  +S E +       ++ AL G P AI   +  LR+
Sbjct:   68 AEAFVDAGVPHVIAVRTRLKVLDDAAALFARHLYLALVEGHTVRQAFDYATAQLSAVAPSLGLPNPSEEAQKFVLLPEWYESPKPTAGLGHSDRGFPHSDGGREGRISTEGDMDPHGV-PLFASLPYGTVVERNPLPELEPPYVHKPFLGRAIALQQLVLKLGQRRQKEVRLVTLHGPAGVGKSSLALAAASHLFERRWFPEG--------------------CVRV-------ELQGCETEGGVLGALAEALDMEFSSMTDVGRALKHWKGLLVLDECDAAGAAGVM-----APLLQKL--LSTQELRVLCTARKPLRVAGEVLFLTDPLHRRDAARLF-----RELAME----GLPL--PLRKSEEQLMQHP---VLEALQGLPRAIWQTAPLLRQ 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8557.16145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQY1_ECTSI2.140e-24855.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CE12_9STRA6.660e-3025.94CHAT domain-containing protein n=1 Tax=Tribonema m... [more]
W7U5S9_9STRA4.670e-2329.37Sh2 domain containing protein n=2 Tax=Monodopsidac... [more]
K8YZD6_NANGC1.300e-2230.08Sh2 domain containing protein (Fragment) n=1 Tax=N... [more]
A0A8J5Y179_DIALT4.450e-726.92Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0M0JJX5_9EUKA8.520e-525.38AAA domain-containing protein n=1 Tax=Chrysochromu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 586..641
e-value: 1.3E-6
score: 30.5
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 587..656
NoneNo IPR availableGENE3D3.40.50.300coord: 116..292
e-value: 2.6E-11
score: 45.3
IPR000980SH2 domainPFAMPF00017SH2coord: 590..634
e-value: 1.9E-4
score: 21.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 123..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8557contigH-elongata_contig8557:1..7509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8557.16145.1mRNA_H-elongata_contig8557.16145.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8557 1..7515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8557.16145.1 ID=prot_H-elongata_contig8557.16145.1|Name=mRNA_H-elongata_contig8557.16145.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=663bp
MFEEKYGSATMVTEKWFREVCAAKQTLPEVVVLTAASAKIVAGAFVRAGI
SNVIAVETSEANTVALDFIRVFYTKLAQGQTVQTSFDEALRSIPHHDQKR
CLLLPDNEDHGVSPFDDASSTGFINHIQRLPRVLEVTPHFRGREIQVQEV
YMYMVQPIRVITIRGKPGIGKTQVALRACKYAWERRLFGETFFIPLKDHA
TGTPITCFTELAARIAHAFGFSEEEICEHREGFLGCIQNKCNSSTKDVLL
VLDGCPPYFVNKKMERITLSSVVERLGDRGASKLKFVITVVTQVGIAREK
VVNIDRLSDLDAAELFVASASRELTVEELRGGMVVGGPQVRSSECMRLFA
GSAIMTALGGHPGAIVSASQRLRERHLLRYEDEYLKEIETNHWRYKCLEQ
EFAKKLEECTHTQSGFVIDGEWGGRQARLSPTPLNAALTATGIATLKGAP
LQLPTSLPARINLSDGEFWWNRAVERHSGKAGASAQTVPWKALCNHSLSQ
YFLDILGAEGRNRPLVEDEFQALANNAQLWHPHSHPGSVPGMVASRQGFL
GSFWPWFKAATRSLKFTEYWGSQMYPVICGLSTTSVDGNKLLQGKPPGTF
LLRLSSTELGALVVMFVKEHQKIGSILMKATSNPGKFKMEYGNDGFMVAT
LRKLIMFIDCWTH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR000980SH2
IPR027417P-loop_NTPase