prot_H-elongata_contig85557.16143.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig85557.16143.1
Unique Name	prot_H-elongata_contig85557.16143.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	58

Homology

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BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Match: A0A0T6AUA5_9SCAR (Kinesin light chain n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6AUA5_9SCAR)

HSP 1 Score: 52.8 bits (125), Expect = 1.470e-6
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0

Query:    1 QGEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLA 37
            QG+Y + E YY+RAL I+EQTLGPD P +AK  N+LA
Sbjct:   33 QGKYEEVERYYQRALEIYEQTLGPDDPNVAKTKNNLA 69

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BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Match: A0A8J3MKP6_9ACTN (Uncharacterized protein n=1 Tax=Catellatospora sp. TT07R-123 TaxID=2733863 RepID=A0A8J3MKP6_9ACTN)

HSP 1 Score: 49.7 bits (117), Expect = 1.980e-5
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0

Query:    1 QGEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLAGLLHAKVVRSSELKRHG 54
            QG+Y+D+E   RRAL++ E T GPDHPR+A  LN+LA     K +R  +LKR G
Sbjct:  461 QGQYSDAEPLLRRALSLTEATHGPDHPRVAIRLNNLA-----KAMR--DLKRPG 507

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BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Match: UPI001FE0B11C (tetratricopeptide repeat protein n=1 Tax=Dactylosporangium aurantiacum TaxID=35754 RepID=UPI001FE0B11C)

HSP 1 Score: 49.3 bits (116), Expect = 2.710e-5
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0

Query:    1 QGEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLA 37
            QG Y+ + ++ RRALAI E TLGPDHP++A +LN+LA
Sbjct:  372 QGRYHQALQHKRRALAITEATLGPDHPKVAIMLNNLA 408

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BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Match: UPI001AAF897D (Tetratricopeptide repeat protein n=2 Tax=Actinomadura barringtoniae TaxID=1427535 RepID=UPI001AAF897D)

HSP 1 Score: 48.1 bits (113), Expect = 5.170e-5
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0

Query:    2 GEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLAGLLHAK 43
            G  +++E  Y  AL IFE+ LGPDHP+IA + ++LAGL H++
Sbjct:   69 GRIDEAEPCYWHALEIFERILGPDHPQIASIYHNLAGLEHSR 110

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BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Match: A0A7I8ESZ2_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Ktedonobacteria bacterium brp13 TaxID=2717365 RepID=A0A7I8ESZ2_9CHLR)

HSP 1 Score: 47.8 bits (112), Expect = 9.560e-5
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0

Query:    1 QGEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLAGL 39
            QG+Y ++E  Y RALAI+EQ LG DHP  A  LN+LA L
Sbjct:  452 QGKYAEAEPLYLRALAIYEQQLGSDHPNTASSLNNLATL 490

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot

BLAST of mRNA_H-elongata_contig85557.16143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0T6AUA5_9SCAR	1.470e-6	62.16	Kinesin light chain n=1 Tax=Oryctes borbonicus Tax...	[more]
A0A8J3MKP6_9ACTN	1.980e-5	51.85	Uncharacterized protein n=1 Tax=Catellatospora sp....	[more]
UPI001FE0B11C	2.710e-5	59.46	tetratricopeptide repeat protein n=1 Tax=Dactylosp...	[more]
UPI001AAF897D	5.170e-5	50.00	Tetratricopeptide repeat protein n=2 Tax=Actinomad...	[more]
A0A7I8ESZ2_9CHLR	9.560e-5	58.97	Tetratricopeptide repeat protein n=1 Tax=Ktedonoba...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..52 e-value: 6.2E-13 score: 50.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 1..41
None	No IPR available	PFAM	PF13424	TPR_12	coord: 1..41 e-value: 5.5E-10 score: 39.4
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..21 score: 8.654

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig85557	contig	H-elongata_contig85557:796..969 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig85557.16143.1	mRNA_H-elongata_contig85557.16143.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig85557 796..969 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig85557.16143.1 ID=prot_H-elongata_contig85557.16143.1|Name=mRNA_H-elongata_contig85557.16143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
QGEYNDSEEYYRRALAIFEQTLGPDHPRIAKLLNDLAGLLHAKVVRSSEL
KRHGLLF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom