mRNA_H-elongata_contig85534.16139.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85534.16139.1
Unique NamemRNA_H-elongata_contig85534.16139.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.310e-40
Identity = 104/260 (40.00%), Postives = 146/260 (56.15%), Query Frame = 1
Query:    4 ARSKELVVATWNVRTMSERGTNGPWH-VEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            AR  +L   T+NVRT++  G N   H V  ++      +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RLVR
Sbjct:   85 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVR 338          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.050e-36
Identity = 90/223 (40.36%), Postives = 126/223 (56.50%), Query Frame = 1
Query:  115 ECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKS-HRWRLDYILVRQHDHRLVR 762
            +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT   TPK        T++   K   + RLD+IL+RQ D RLVR
Sbjct:   11 DCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK-----GVHTFQSSNKGKEKHRLDFILMRQTDRRLVR 224          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.540e-35
Identity = 92/222 (41.44%), Postives = 128/222 (57.66%), Query Frame = 1
Query:  115 ECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RLVR
Sbjct:   11 DCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVR 226          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.570e-34
Identity = 95/258 (36.82%), Postives = 137/258 (53.10%), Query Frame = 1
Query:    4 ARSKELVVATWNVRTMSERGTNGPWH-VEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH-----KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLV 759
            AR  ++   T+NVRT++  G N   H V  ++       CD I +QETR + + +I     GY+V  SG   G   K G+  VG+A++E++  + G +G   + I+ RL+KVR+        TF+VGYAP     T       K      L + + EV + DHL ++MDANA TGGR +G    D  ++G  GRD +N+NG R L  A   +LS+ NT F TPK G +   F      K  ++ LD+IL+RQ D R V
Sbjct:  118 AREDDVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHD--GYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDG--CCDAKIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYFRTPKGG-VQHTFQSSNKGKE-KYGLDFILMRQTDRRFV 369          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.290e-32
Identity = 93/245 (37.96%), Postives = 128/245 (52.24%), Query Frame = 1
Query:   19 LVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFK-HRAATTFIVGYAPTETAATCHKSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH 750
            L VATWNVRT++  G NG      +L  A + +   + +QETR   +T   A  AG+ V C G   G     G+  VG+AV+ES+ +         + I+  L+ +R +   HR A  F+  YAPTE +    K  F  +L S V  + + + + ++MDANARTG R +GG   D  V+G  GRD LNDNG+ LL  A   +L++ NT F T K G      TY     +   RLDYIL RQ  H
Sbjct:  113 LRVATWNVRTLAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTEPSTADSKRVFWGKLDSLVRRIPSKECVHVLMDANARTGDRLDGG---DGRVIGMYGRDELNDNGMLLLNFATGNRLALTNTFFETRKGGIWH---TYNGVSGNDCKRLDYILTRQAHH 341          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.170e-31
Identity = 86/216 (39.81%), Postives = 124/216 (57.41%), Query Frame = 1
Query:  133 IQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            +QETR   + +I     GY++  SG   G   K G+  VG+A++E++  ++G +G   + I+ RL+KVR+        TF+VGYAP ETA T        K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  A+  +LS+ NT F TP+ G +   F      K  ++RLD+IL+RQ D R VR
Sbjct:   12 LQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPMETARTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPEGG-VQHTFRSSNKGKE-KYRLDFILMRQTDRRFVR 221          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 6.670e-31
Identity = 92/245 (37.55%), Postives = 130/245 (53.06%), Query Frame = 1
Query:   19 LVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFK-HRAATTFIVGYAPTETAATCHKSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH 750
            L VATWNVRT++  G NG      +L  A + +   + +QETR   +T   A  AG+ V C G   G     G+  VG+AV+ES+ +         + I+ RL+ +R++   HR A  F+   APTE +    K  F  +L S V  + + + + +++DANARTG R +GG   D  V+G  GRD LNDNG+ LL  A + +L++ NT F T K G      TY     +   RLDYIL RQ  H
Sbjct:   58 LRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG---DGRVIGMYGRDELNDNGMLLLNFATENRLALTNTFFETRKGGIWH---TYNGVSGNDCKRLDYILTRQAHH 286          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.330e-26
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  280 ALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            ++G +G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G +   F      K  ++RLD+IL+RQ D R VR
Sbjct:    4 SVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGG-VQHTFQSSNKGKE-KYRLDFILMRQTDRRFVR 166          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 9.760e-25
Identity = 72/165 (43.64%), Postives = 95/165 (57.58%), Query Frame = 1
Query:  286 GPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RL R
Sbjct:  299 GEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLER 459          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.220e-24
Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  280 ALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 762
            ++G +G   + I+ RL+KVR+        TF+VGYAPT+T  T        K  F   + + + EV + DHL ++MDANARTG R +G    D  ++G  GRD++N+NG RLL  A+  +LS+ NT F TPK G      T++   K  ++ LD+IL+RQ + R VR
Sbjct:    4 SVGEEGRTVECISLRLMKVRLQIGRTCGVTFVVGYAPTDTVRTTAGGDVNAKDSFWTAVDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYFRTPKGGV---QHTFQSSNKGKKYHLDFILMRQTNRRFVR 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE1.310e-4040.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KP87_9PHAE1.050e-3640.36Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE1.540e-3541.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDU4_9PHAE1.570e-3436.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDS6_9PHAE1.290e-3237.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6H7_9PHAE1.170e-3139.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE6.670e-3137.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KL25_9PHAE9.330e-2643.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDI8_9PHAE9.760e-2543.64Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J5Z5_9PHAE1.220e-2440.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85534contigH-elongata_contig85534:1963..2724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score92.8
Seed ortholog evalue2.4e-16
Seed eggNOG ortholog6412.HelroP161862
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGs39VM0@33154,3BPUP@33208,3D6HY@33213,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931258.325941-CDS-H-elongata_contig85534:1962..27241622931258.325941-CDS-H-elongata_contig85534:1962..2724Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85534 1963..2724 +
1691679762.8659008-CDS-H-elongata_contig85534:1962..27241691679762.8659008-CDS-H-elongata_contig85534:1962..2724Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85534 1963..2724 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85534.16139.1prot_H-elongata_contig85534.16139.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85534 1963..2724 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85534.16139.1

>prot_H-elongata_contig85534.16139.1 ID=prot_H-elongata_contig85534.16139.1|Name=mRNA_H-elongata_contig85534.16139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
AARSKELVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRH
DRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGI
VPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCHKSKFCKELRSTV
VEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLL
ACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH
RLVR
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mRNA from alignment at H-elongata_contig85534:1963..2724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85534.16139.1 ID=mRNA_H-elongata_contig85534.16139.1|Name=mRNA_H-elongata_contig85534.16139.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=762bp|location=Sequence derived from alignment at H-elongata_contig85534:1963..2724+ (Himanthalia elongata Himel1 dioecious)
GCAGCACGTTCGAAGGAGCTAGTGGTTGCCACATGGAACGTCCGCACCAT GTCCGAGAGAGGGACCAACGGCCCGTGGCATGTGGAGGATCTTTTGATGT TCGCTGTGAAGTACGAGTGCGACTTCATCGCCATACAGGAGACTCGCCAT GACAGAAAGACAACCATCCAAGCACCAGCCGCTGGTTATATCGTGCACTG CAGCGGTCATTGCGATGGTGATGGAGGTAAGCCCGGGATACTCAGAGTTG GTCTGGCTGTCAGGGAGTCTATCGTTCGCGCACTCGGCCCAGATGGCATT GTGCCGAAACACATCAATGCGCGGCTGCTGAAGGTGAGGGTGATTTTTAA ACACAGAGCCGCCACGACCTTCATCGTGGGATACGCTCCGACTGAAACAG CAGCCACCTGTCACAAGTCGAAGTTCTGCAAGGAACTTCGCAGCACTGTT GTTGAGGTATCTGCCAGCGACCACCTGAGTTTGATGATGGATGCTAACGC CCGTACGGGAGGAAGGGGAGAGGGAGGTGGACTAGGGGATGTCTGGGTTT TGGGACCATGCGGCAGAGACACTCTCAATGACAACGGGTTGCGACTTCTA GCATGTGCTGCCAAGTACAAGCTGTCTATTGTCAACACCATTTTCAGCAC GCCGAAGCGTGGGAGAATCTCGGATGCGTTCACATATGAGAGGCCGAAGA AATCTCACCGCTGGCGCCTGGACTACATCCTGGTACGCCAGCATGACCAT AGGCTCGTCCGG
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Coding sequence (CDS) from alignment at H-elongata_contig85534:1963..2724+

>mRNA_H-elongata_contig85534.16139.1 ID=mRNA_H-elongata_contig85534.16139.1|Name=mRNA_H-elongata_contig85534.16139.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at H-elongata_contig85534:1963..2724+ (Himanthalia elongata Himel1 dioecious)
GCAGCACGTTCGAAGGAGCTAGTGGTTGCCACATGGAACGTCCGCACCAT
GTCCGAGAGAGGGACCAACGGCCCGTGGCATGTGGAGGATCTTTTGATGT
TCGCTGTGAAGTACGAGTGCGACTTCATCGCCATACAGGAGACTCGCCAT
GACAGAAAGACAACCATCCAAGCACCAGCCGCTGGTTATATCGTGCACTG
CAGCGGTCATTGCGATGGTGATGGAGGTAAGCCCGGGATACTCAGAGTTG
GTCTGGCTGTCAGGGAGTCTATCGTTCGCGCACTCGGCCCAGATGGCATT
GTGCCGAAACACATCAATGCGCGGCTGCTGAAGGTGAGGGTGATTTTTAA
ACACAGAGCCGCCACGACCTTCATCGTGGGATACGCTCCGACTGAAACAG
CAGCCACCTGTCACAAGTCGAAGTTCTGCAAGGAACTTCGCAGCACTGTT
GTTGAGGTATCTGCCAGCGACCACCTGAGTTTGATGATGGATGCTAACGC
CCGTACGGGAGGAAGGGGAGAGGGAGGTGGACTAGGGGATGTCTGGGTTT
TGGGACCATGCGGCAGAGACACTCTCAATGACAACGGGTTGCGACTTCTA
GCATGTGCTGCCAAGTACAAGCTGTCTATTGTCAACACCATTTTCAGCAC
GCCGAAGCGTGGGAGAATCTCGGATGCGTTCACATATGAGAGGCCGAAGA
AATCTCACCGCTGGCGCCTGGACTACATCCTGGTACGCCAGCATGACCAT
AGGCTCGTCCGGGCAGCACGTTCGAAGGAGCTAGTGGTTGCCACATGGAA
CGTCCGCACCATGTCCGAGAGAGGGACCAACGGCCCGTGGCATGTGGAGG
ATCTTTTGATGTTCGCTGTGAAGTACGAGTGCGACTTCATCGCCATACAG
GAGACTCGCCATGACAGAAAGACAACCATCCAAGCACCAGCCGCTGGTTA
TATCGTGCACTGCAGCGGTCATTGCGATGGTGATGGAGGTAAGCCCGGGA
TACTCAGAGTTGGTCTGGCTGTCAGGGAGTCTATCGTTCGCGCACTCGGC
CCAGATGGCATTGTGCCGAAACACATCAATGCGCGGCTGCTGAAGGTGAG
GGTGATTTTTAAACACAGAGCCGCCACGACCTTCATCGTGGGATACGCTC
CGACTGAAACAGCAGCCACCTGTCACAAGTCGAAGTTCTGCAAGGAACTT
CGCAGCACTGTTGTTGAGGTATCTGCCAGCGACCACCTGAGTTTGATGAT
GGATGCTAACGCCCGTACGGGAGGAAGGGGAGAGGGAGGTGGACTAGGGG
ATGTCTGGGTTTTGGGACCATGCGGCAGAGACACTCTCAATGACAACGGG
TTGCGACTTCTAGCATGTGCTGCCAAGTACAAGCTGTCTATTGTCAACAC
CATTTTCAGCACGCCGAAGCGTGGGAGAATCTCGGATGCGTTCACATATG
AGAGGCCGAAGAAATCTCACCGCTGGCGCCTGGACTACATCCTGGTACGC
CAGCATGACCATAGGCTCGTCCGG
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