prot_H-elongata_contig85523.16138.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85523.16138.1
Unique Nameprot_H-elongata_contig85523.16138.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: D8LCR9_ECTSI (NF-X1 finger and helicase domain protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR9_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.180e-55
Identity = 86/120 (71.67%), Postives = 95/120 (79.17%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLPCGHRV 120
            MWSESV+P LR KG IG  LELQCARH ++IT I K EEF SLAGDGGCS+ACS RLPCGH C RRCHPDDP H GVRC+EPC RL +PCEH    LCGD+CGPC QR+D V LPCGH +
Sbjct: 1628 MWSESVIPILREKGAIGTTLELQCARHKDSITVIHKYEEFASLAGDGGCSRACSSRLPCGHACLRRCHPDDPHHLGVRCSEPCPRLLQPCEHXXXXLCGDECGPCYQRVDVVGLPCGHEM 1747          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A2I1GNP4_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein n=12 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1GNP4_9GLOM)

HSP 1 Score: 140 bits (352), Expect = 7.910e-36
Identity = 63/138 (45.65%), Postives = 81/138 (58.70%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVR--CNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLPCGHRVTNVACVIAQAPETAKC 136
            MW +SV+  +R +  IG +  ++C  HP++I  I  P +F+ L+ DGGCS  C  R+PCGH CA +CHPDDPEH G    C  PCL LHK C H C L CG  CG C   ++ + LPCGH   +  C   Q P   KC
Sbjct: 1412 MW-KSVINLMRERNQIGKSFPIRCESHPDSINYIKSPRQFQELSPDGGCSLPCLCRMPCGHNCAYKCHPDDPEHVGAAKACMRPCLELHKNCNHICPLPCGVPCGECEIVLEDILLPCGHNYPSPKCYQTQNPNLIKC 1548          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A397SDG8_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SDG8_9GLOM)

HSP 1 Score: 139 bits (351), Expect = 1.040e-35
Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLP-CGHRVTNVAC 125
            MW+  V+  L  +G +G  + ++C +HP+ +  I +PE+FE ++ DGGC Q C++ LPCGH C+ +CH DDPEH GV+CN+PC R H  C HPC   C +DCG C   I  + LP CGH + N  C
Sbjct:  653 MWTP-VIDILHRRGQVGFGMPIKCHKHPDYVNVIVEPEQFEQVSPDGGCYQNCNMSLPCGHICSYKCHSDDPEHIGVKCNKPCSRCHSGCNHPCPKSCFEDCGKCGFSIGDIILPGCGHVLQNAKC 777          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A2I1H2I4_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1H2I4_9GLOM)

HSP 1 Score: 139 bits (350), Expect = 1.450e-35
Identity = 60/137 (43.80%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLP-CGHRVTNVACVIAQAPETAKC 136
            MW+  V+  L  +  +G  + + C +HP+    I  P++FE ++ DGGC + C++ LPCGH C  +CH DDPEH GVRCNEPC+RLH  C HPC  LC D CG C   I  + LP CGH + N  C   ++ ++ +C
Sbjct:  767 MWAP-VINILNDRKQVGFGMPIVCNKHPDYKNIIIDPDQFEQVSPDGGCYENCNMSLPCGHICKYKCHSDDPEHIGVRCNEPCIRLHPECSHPCPKLCSDYCGKCEFLIGDIILPGCGHEIKNAKCWQDRSKDSLRC 902          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A2P4PK82_RHIID (Uncharacterized protein n=2 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4PK82_RHIID)

HSP 1 Score: 139 bits (350), Expect = 1.450e-35
Identity = 60/137 (43.80%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLP-CGHRVTNVACVIAQAPETAKC 136
            MW+  V+  L  +  +G  + + C +HP+    I  P++FE ++ DGGC + C++ LPCGH C  +CH DDPEH GVRCNEPC+RLH  C HPC  LC D CG C   I  + LP CGH + N  C   ++ ++ +C
Sbjct:  781 MWTP-VINILNDRKQVGFGMPIVCNKHPDYKNIIIDPDQFEQVSPDGGCYENCNMSLPCGHICKYKCHSDDPEHIGVRCNEPCIRLHPECSHPCPKLCSDYCGKCEFLIGDIILPGCGHEIKNAKCWQDRSKDSLRC 916          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A372R9B3_9GLOM (Uncharacterized protein (Fragment) n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372R9B3_9GLOM)

HSP 1 Score: 139 bits (349), Expect = 1.980e-35
Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLPCGHRVTNVACVIAQAPETAKC 136
            MW+  V+  L  +  +G  + + C +HP    TI  P++FE ++ DGGC + C++ LPCGH C  +CH DDPEH GV+CNE C RLH  C HPC   C DDCG C   I ++ L CGH + N  C   Q  ++ KC
Sbjct:  953 MWAP-VINILHGRNQVGFGIPIVCNKHPYYKNTIVDPDQFEQISPDGGCYENCNMALPCGHICKYKCHSDDPEHIGVKCNERCSRLHSICHHPCPKFCSDDCGRCEFPIGSILLRCGHILQNAKCWQIQIMDSIKC 1087          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A2N0PD28_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N0PD28_9GLOM)

HSP 1 Score: 137 bits (346), Expect = 5.090e-35
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLPCGHRVTNVACVIAQAPETAKC 136
            MW+  V+  L  +  +G  + + C +HP    TI  P++FE ++ DGGC + C++ LPCGH C  +CH DDPEH GV+CNE C RLH  C HPC   C D+CG C   I ++ L CGH + N  C   Q  ++ KC
Sbjct: 1410 MWAP-VINILHNRNQVGFGMPIICNKHPHYKNTIVDPDQFEQISPDGGCYENCNMALPCGHICKYKCHSDDPEHIGVKCNERCSRLHSKCHHPCPKFCSDECGRCEFPIGSILLRCGHILQNAKCWQIQIMDSIKC 1544          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: A0A015LDX1_RHIIW (Ecm32p n=11 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015LDX1_RHIIW)

HSP 1 Score: 137 bits (346), Expect = 5.090e-35
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLPCGHRVTNVACVIAQAPETAKC 136
            MW+  V+  L  +  +G  + + C +HP    TI  P++FE ++ DGGC + C++ LPCGH C  +CH DDPEH GV+CNE C RLH  C HPC   C D+CG C   I ++ L CGH + N  C   Q  ++ KC
Sbjct: 1467 MWAP-VINILHNRNQVGFGMPIICNKHPHYKNTIVDPDQFEQISPDGGCYENCNMALPCGHICKYKCHSDDPEHIGVKCNERCSRLHSKCHHPCPKFCSDECGRCEFPIGSILLRCGHILQNAKCWQIQIMDSIKC 1601          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: V5ZE24_9GLOM (Putative RNA helicase (Fragment) n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=V5ZE24_9GLOM)

HSP 1 Score: 137 bits (344), Expect = 6.430e-35
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRIDAVDLP-CGHRVTN 122
            MW+  V+  L  +G +G  + ++C +HP+ +  I +PE+FE ++ DGGC Q C++ LPCGH C+ +CH DDPEH GV+CN+PC R H  C HPC   C +DCG C   I  + LP CGH + N
Sbjct:  557 MWTP-VIDILHRRGQVGFGMPIKCHKHPDYVNVIVEPEQFEQVSPDGGCYQNCNMSLPCGHICSYKCHSDDPEHIGVKCNKPCSRCHSGCNHPCPKSCFEDCGKCGFSIGDIILPGCGHVLQN 678          
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Match: D8TT17_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TT17_VOLCA)

HSP 1 Score: 137 bits (344), Expect = 9.420e-35
Identity = 66/126 (52.38%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCSQACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGDDCGPCRQRI-DAVDLPCGHRVTNVAC 125
            MW + VL  L   G +G AL ++CA H  T T I +PE+F  LAGDGGC  AC   LPCGHTC RRCHPDD  H  V C  PC RLH  C HP    CG++CG C + I + V LPCGH V  + C
Sbjct: 1012 MWCQ-VLDLLERDGCVGRALRVRCANHG-TETEIHEPEDFSRLAGDGGCQAACGEALPCGHTCPRRCHPDDRSHVHVVCTRPCARLHAKCGHPXDKTCGEECGRCMRVIQEEVTLPCGHGVHGIDC 1135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85523.16138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR9_ECTSI3.180e-5571.67NF-X1 finger and helicase domain protein, putative... [more]
A0A2I1GNP4_9GLOM7.910e-3645.65P-loop containing nucleoside triphosphate hydrolas... [more]
A0A397SDG8_9GLOM1.040e-3546.03P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2I1H2I4_9GLOM1.450e-3543.80Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
A0A2P4PK82_RHIID1.450e-3543.80Uncharacterized protein n=2 Tax=Rhizophagus irregu... [more]
A0A372R9B3_9GLOM1.980e-3544.12Uncharacterized protein (Fragment) n=1 Tax=Rhizoph... [more]
A0A2N0PD28_9GLOM5.090e-3543.38Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
A0A015LDX1_RHIIW5.090e-3543.38Ecm32p n=11 Tax=Rhizophagus irregularis TaxID=5885... [more]
V5ZE24_9GLOM6.430e-3546.34Putative RNA helicase (Fragment) n=1 Tax=Glomus ce... [more]
D8TT17_VOLCA9.420e-3552.38Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85523contigH-elongata_contig85523:165..2207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85523.16138.1mRNA_H-elongata_contig85523.16138.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85523 165..2207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85523.16138.1 ID=prot_H-elongata_contig85523.16138.1|Name=mRNA_H-elongata_contig85523.16138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MWSESVLPTLRAKGLIGPALELQCARHPETITTICKPEEFESLAGDGGCS
QACSLRLPCGHTCARRCHPDDPEHHGVRCNEPCLRLHKPCEHPCTLLCGD
DCGPCRQRIDAVDLPCGHRVTNVACVIAQAPETAKC
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