prot_H-elongata_contig85513.16135.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85513.16135.1
Unique Nameprot_H-elongata_contig85513.16135.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: D8LMZ4_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ4_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.080e-34
Identity = 121/159 (76.10%), Postives = 132/159 (83.02%), Query Frame = 0 
Query:    1 MLIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVHVDGNVGL---DRRYLDELLQTRPELRIVGG 156
            M+IARSLKDAA+ G ATTSLLLR S+DL+C+NLMCAK+G ACVCRLAVHLSRL  L ELD+AENDL VLPE VF+LP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EVHVDGN GL   DR  + E LQ RP+  +V G
Sbjct:    1 MVIARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTEVHVDGNSGLGSSDR--VVEALQHRPQTTVVFG 157
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A1V9ZV51_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV51_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.310e-18
Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPELE 80
            +IA+SL+DAA    +   L+LR S DL+CRNLMC ++G ACVC+L++ L RL  L ELD++EN L++LP S+F L +L+
Sbjct:    1 MIAKSLRDAATHTSSVQKLVLRKSQDLVCRNLMCERVGEACVCKLSLVLERLPQLEELDVSENKLQMLPPSIFQLSKLK 79
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A836CFY3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.870e-17
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0 
Query:    2 LIARSLKDAAKFG--GATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFD 75
            L+A SL +A+     G   SL+LR+S+DL+CRN+MC KLGGAC+CRLAV L R  GL  LD+A+N L  LPE+V +
Sbjct:    9 LVAASLAEASSMAPQGGPVSLVLRSSEDLLCRNIMCEKLGGACLCRLAVCLGRCSGLQSLDLAKNGLATLPEAVLE 84
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A485L6B7_9STRA (Aste57867_16664 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6B7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.550e-16
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPELE 80
            +I RS++DAA   GA   LLLR S+DL+CRNLMC ++G AC+CR ++ L +L  L +LD++ N+L  LP ++F LP LE
Sbjct:  332 MIVRSVRDAAMHMGAVKELLLRRSEDLLCRNLMCERVGEACICRFSLVLEKLPQLTKLDVSHNNLHALPPALFQLPRLE 410
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A024GQG6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQG6_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.650e-16
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    3 IARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPEL 79
            +A S + AAK G AT  L+L  S DL+C+NLMC ++GGAC CRLA  L+ +  L  LD++ N+L  +P++VF L +L
Sbjct:    5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSLQDL 81
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: T0QH27_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QH27_SAPDV)

HSP 1 Score: 80.1 bits (196), Expect = 4.390e-16
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPEL 79
            +IA+SL+DAA    A   L+LR S+DL+C NLMC ++G ACVC+L+V L RL  L  LD++ N+L+ LP ++F L  L
Sbjct:    1 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSLRHL 78
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: F0WI42_9STRA (Uncharacterized protein AlNc14C107G6249 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WI42_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.080e-15
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:    3 IARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPELE 80
            +A S +D AK G     L+L+ S DL+C+NLMC K+GGAC CRLA  L+ +  L  LD++ N L  +PE+VF L +L+
Sbjct:    5 VATSFRDVAKNGATIKKLILKKSQDLVCKNLMCEKIGGACACRLAHILTCVPKLTHLDLSNNSLETIPEAVFGLQDLK 82
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A6G0X207_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X207_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.290e-15
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPELE 80
            +I RS+++AA   GA   L+LR S+DL+CRNLMC ++G AC+CRL++ L +L  L  LD++ N L  LP SVF L  LE
Sbjct:  291 MIVRSVREAAMHMGAVRELILRQSEDLLCRNLMCERVGDACMCRLSIVLEKLPNLTTLDVSANRLPALPPSVFQLGRLE 369
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A067CF62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CF62_SAPPC)

HSP 1 Score: 79.0 bits (193), Expect = 3.890e-14
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFDLPEL 79
            +IA+SL+DAA    A   L+LR S+DL+C NLMC ++G ACVC+L+V L RL  L  LD++ N+L  LP ++F L  L
Sbjct:  382 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLMSLPPAIFSLRHL 459
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BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Match: A0A397AM31_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AM31_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.040e-13
Identity = 35/74 (47.30%), Postives = 53/74 (71.62%), Query Frame = 0 
Query:    2 LIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHLSRLRGLHELDIAENDLRVLPESVFD 75
            +IARS+++AA   GA   L+L+ S+DL+CRNLMC ++G ACVCR ++ L +L  L  L+++ N L  LP S+F+
Sbjct:    1 MIARSVREAAMHMGAVRELILQRSEDLLCRNLMCERVGEACVCRFSMVLEKLPQLKALNVSHNHLHALPPSLFN 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85513.16135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LMZ4_ECTSI4.080e-3476.10Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A1V9ZV51_9STRA2.310e-1851.90Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A836CFY3_9STRA2.870e-1755.26Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A485L6B7_9STRA2.550e-1650.63Aste57867_16664 protein n=1 Tax=Aphanomyces stella... [more]
A0A024GQG6_9STRA3.650e-1648.05Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
T0QH27_SAPDV4.390e-1650.00Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
F0WI42_9STRA1.080e-1547.44Uncharacterized protein AlNc14C107G6249 n=1 Tax=Al... [more]
A0A6G0X207_9STRA5.290e-1550.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067CF62_SAPPC3.890e-1450.00Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A397AM31_9STRA1.040e-1347.30Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 79..92
score: 47.79
coord: 99..112
score: 52.6
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 53..72
e-value: 64.0
score: 7.5
coord: 76..95
e-value: 10.0
score: 13.7
coord: 99..118
e-value: 72.0
score: 7.2
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 40..133
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 30..136
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 53..76
e-value: 0.33
score: 20.0
coord: 99..122
e-value: 0.044
score: 22.9
coord: 77..98
e-value: 88.0
score: 5.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 51..89
e-value: 1.5E-6
score: 27.8
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 101..117
e-value: 0.68
score: 10.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 17..143
e-value: 5.8E-24
score: 86.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85513contigH-elongata_contig85513:1082..2015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85513.16135.1mRNA_H-elongata_contig85513.16135.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85513 896..2188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85513.16135.1 ID=prot_H-elongata_contig85513.16135.1|Name=mRNA_H-elongata_contig85513.16135.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MLIARSLKDAAKFGGATTSLLLRASDDLICRNLMCAKLGGACVCRLAVHL
SRLRGLHELDIAENDLRVLPESVFDLPELEHLDISGNGLTALPATVASLA
SLRTLRLSNNSLMGLPRELGSLPCLKEVHVDGNVGLDRRYLDELLQTRPE
LRIVGGKDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf