prot_H-elongata_contig85483.16134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85483.16134.1
Unique Nameprot_H-elongata_contig85483.16134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: D7FUY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY5_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.610e-40
Identity = 60/104 (57.69%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDEQVSGRLEVRCEYALNSKGLLGVSIREHLLLPDENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G+LTN++ W L+DE + GRLEV C+Y+ + +G +  S+R+HLLLPD  MPRDP++L+R+L+RAMPYE+FDPD+HA+ETT++D+ +RIV+ RGPK EG +N+F R
Sbjct:  127 GNLTNIITWTLKDEGIDGRLEVMCDYSFDPRGRMNTSLRKHLLLPD-GMPRDPQELVRVLRRAMPYELFDPDDHAMETTFLDDTLRIVKHRGPKFEGLVNIFAR 229          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: K0TAS2_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAS2_THAOC)

HSP 1 Score: 93.2 bits (230), Expect = 5.110e-21
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    1 GSLTNVLVWRL----EDEQVSGRLEVRCEYALNSKGLLGVSIREHLLLPDE--NMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G+LTN+  W      E    SG     C Y++N    + V +++H L P +  ++P D   L+ LL RAMP E+FDP  HAL+TTY+D ++RIVR+ GP+HEG  N+F+R
Sbjct:  122 GTLTNIASWDYAETGEQFDSSGNFSAVCTYSINQGARMVVDLKDHELRPAKGSSIPSDVPGLVGLLHRAMPKELFDPSAHALDTTYLDADIRIVRLTGPQHEGVRNIFMR 231          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: B8BYW6_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW6_THAPS)

HSP 1 Score: 95.5 bits (236), Expect = 1.230e-20
Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 0
Query:    1 GSLTNVLVWRL-EDEQV---SGRLEVRCEYALNSKGLLGVSIREHLLLPDEN--MPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            GS+TN+  W   EDE+    +G   V+C Y +N    + V + +H L P +   +P D   L+ LL RA+P EMFDP+ HA++TTY+D ++RIVR+ GP HEG  N+FIR
Sbjct:  560 GSVTNMAQWDFAEDEETFDATGNFNVKCSYTINQGARMVVDLDDHELRPAKGSKIPSDVPALVGLLHRAIPKEMFDPNGHAMDTTYLDADLRIVRLTGPNHEGVRNIFIR 669          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A7S0AIY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIY2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.930e-20
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDE-----QVSGRLEVRCEYALNSKGLLGVSIREHLL--LPDENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIRD 105
            G++TN+  W L +E       SG   V+C+Y +N    + + +++H+L       +P D E L+ +L  AMP EMFDP+E A++TTY+DE +R+VR+ G + EG  NVFIR 
Sbjct:  101 GTVTNMARWDLAEEVPGVFDCSGTFSVKCDYGINQGARMNIDLKDHVLELARGSRVPTDVEGLVGMLSGAMPSEMFDPNELAMDTTYLDEKIRVVRLTGSRLEGVRNVFIRS 212          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A7S2FVE3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVE3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.540e-20
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDEQVSGRLEVRCEYALNSKGLLGVSIREHLLLPDENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G LTN + W L +E  SG +E++C+Y +  KG L + + EH+L P    P DP  L  +LQRA+P E+F P+E  +  TYMD ++R+V     K+    N++ R
Sbjct:   67 GKLTNTIAWELVEEGASGTMEIKCDYMVTPKGDLHLDLTEHVLTPVNGSPADPMQLCGMLQRAVPPEVFMPEELDVHITYMDADIRVVECTSRKYGTSKNIYSR 170          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A7S2XQJ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQJ7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.230e-19
Identity = 42/111 (37.84%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDEQ-----VSGRLEVRCEYALNSKGLLGVSIREHLLLP--DENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G++TN+  W L + +     V+G   V+C+Y +     + V +++HLL P     +P+D + L+ LL RAMP E+FDP++  ++TTY+D +++IVR+ G ++EG  N+FIR
Sbjct:  188 GTITNIATWDLSEGEGGVFDVTGTFSVKCDYEIEQGSRMKVELKDHLLEPARGSKIPQDVQGLVGLLHRAMPTELFDPNDVNIDTTYLDADLKIVRLTGSRYEGIRNIFIR 298          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A1Z5JQY1_FISSO (PAP_fibrillin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQY1_FISSO)

HSP 1 Score: 89.7 bits (221), Expect = 1.700e-19
Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDE-----QVSGRLEVRCEYALNSKGLLGVSIREHLLLPDEN--MPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G L N   W L ++     + SG   V C Y +N    + +S+ EH+L P +   +P+D   L+ LL RAMP EMFDP +HA++TTY+D ++RIVR  GP+ EG  ++FIR
Sbjct:  143 GKLINEATWDLAEQGDGNFECSGTFTVDCSYKINQGARMILSLDEHILKPAKGTKIPKDVPALVGLLHRAMPKEMFDPADHAIDTTYLDGDLRIVRHTGPRLEGVRDIFIR 253          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A448ZFM7_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFM7_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.220e-19
Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDEQVS----------GRLEVRCEYALNSKGLLGVSIREHL--LLPDENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G++ N   W L ++             G+  ++C Y++N    + + + +H+  L     +P+DPE L+ +L RA+P E+FDP++HA++TTY+D ++RIVRM GPK E   ++FIR
Sbjct:  182 GTVVNEATWSLAEDHTDPTPATSFEAFGKFSIKCSYSINQGARMVMELNDHVIELSKGSKVPKDPEKLVGMLYRAIPTELFDPNDHAMDTTYLDGDLRIVRMAGPKFESVRDIFIR 297          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: B7G6D7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6D7_PHATC)

HSP 1 Score: 83.6 bits (205), Expect = 5.050e-17
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDE-----QVSGRLEVRCEYALNSKGLLGVSIREHLLLPDEN--MPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIR 104
            G +TN  +W L +        +G   V+C Y++N    + V + +HLL P     +P+D + L+  L RAMP  +FDP +HA++TTY+D ++RIVR  G + EG  ++F+R
Sbjct:  161 GVVTNQALWDLAEAGDAAFDATGTFSVKCNYSINQGARMIVDLEDHLLQPARGSAIPQDVQGLVGYLHRAMPKTLFDPSDHAMDTTYLDVDLRIVRYTGARLEGSRDIFMR 271          
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Match: A0A7S1CY27_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY27_CYCTE)

HSP 1 Score: 81.3 bits (199), Expect = 1.830e-16
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    1 GSLTNVLVWRLEDE------QVSGRLEVRCEYALNSKGLLGVSIREHL--LLPDENMPRDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLNVFIRD 105
            G + NV +W +  +        SG   V+C Y++N    + V +  H   L     +P+D   ++  +  AMP E+FDP EHA++TTY+D ++RIVR  GPK+EG  ++FIR 
Sbjct:  114 GRVNNVALWDVALDPSSDVFDASGIFSVKCTYSINQGARMVVDLDGHTIELAKGSKLPKDVPAVIASIHGAMPPELFDPSEHAMDTTYLDGDLRIVRYTGPKYEGARDIFIRS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85483.16134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FUY5_ECTSI2.610e-4057.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0TAS2_THAOC5.110e-2142.73PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
B8BYW6_THAPS1.230e-2044.55PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A7S0AIY2_9STRA1.930e-2040.18Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2FVE3_9STRA3.540e-2039.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XQJ7_9STRA1.230e-1937.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5JQY1_FISSO1.700e-1942.34PAP_fibrillin domain-containing protein n=2 Tax=Fi... [more]
A0A448ZFM7_9STRA2.220e-1935.34PAP_fibrillin domain-containing protein n=1 Tax=Ps... [more]
B7G6D7_PHATC5.050e-1736.94Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1CY27_CYCTE1.830e-1636.28Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85483contigH-elongata_contig85483:1715..2353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85483.16134.1mRNA_H-elongata_contig85483.16134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85483 1715..2353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85483.16134.1 ID=prot_H-elongata_contig85483.16134.1|Name=mRNA_H-elongata_contig85483.16134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
GSLTNVLVWRLEDEQVSGRLEVRCEYALNSKGLLGVSIREHLLLPDENMP
RDPEDLLRLLQRAMPYEMFDPDEHALETTYMDENMRIVRMRGPKHEGRLN
VFIRDRPLIS*
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