prot_H-elongata_contig85119.16104.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85119.16104.1
Unique Nameprot_H-elongata_contig85119.16104.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Match: D8LCV7_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV7_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 8.480e-30
Identity = 76/110 (69.09%), Postives = 85/110 (77.27%), Query Frame = 0
Query:    1 GQGELGRRREALGALQRGLGAWRG--GSRPPGGFPTSXXXXXXXXXSRLEQQRETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAAAGLRNEAR 108
            GQGEL RRR AL  L R +GA RG  G          XXXXXXXX SRLEQQRETM+EH+RMLA+LG+GVGRLKTQS +INEETSLHVRLLDDMEG+A  A++GL  EAR
Sbjct:   11 GQGELARRRAALDTLHREVGAVRGSMGGXXXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLLTEAR 120          
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Match: A0A6H5KPB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 6.030e-29
Identity = 77/113 (68.14%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 GQGELGRRREALGALQRGLGAWRGGSRPPGG-----FPTSXXXXXXXXXSRLEQQRETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAAAGLRNEAR 108
            G GEL RRR  L  L+R +GA RG   P GG         XXXXXXXX SRLEQQRETM+EH+RMLA+LG+GVGRLKTQS +INEETSLHVRLLDDMEG+A  A++GLR EAR
Sbjct:   58 GHGELARRRAELETLRREVGAVRG---PMGGGQXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSAMINEETSLHVRLLDDMEGDAERASSGLRTEAR 167          
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Match: A0A835ZEW5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW5_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.020e-11
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   46 RLEQQRETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAAAGLRNEAR 108
            RL +QRE M+EH+R++ ELG+GVGRL   S +IN+E +LHVRLLDDM+ +   A A L  E R
Sbjct:   87 RLAKQREAMQEHDRIVEELGKGVGRLHQTSVVINDEANLHVRLLDDMDEDIERANASLMQETR 149          
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Match: A0A4D9D1R7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.620e-8
Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   24 GGSRPPGGFPTSXXXXXXXXXSRLEQQRETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAAAGLRNEAR 108
            GG   PGG  T             +Q+RE + E + +L +LG+GV RLK Q  +I +ET +H +LL+D++G+   AA+ LR EAR
Sbjct:  112 GGGGVPGGLRTL-----------AQQRREIIHEQDELLEDLGKGVDRLKMQGLVIRDETGIHHKLLEDIDGDVEAAASSLRMEAR 185          
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Match: A0A024G688_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G688_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.490e-5
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   47 LEQQRETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAAAGLRNE 106
            L  Q++ MR+ +  L  +G+GV  LK  S  + +ET LH+RLLDDM+G+   A  GL  E
Sbjct:  110 LGLQKQIMRDQDDQLDIIGKGVANLKNFSMAVKDETDLHIRLLDDMDGDVLHAKDGLNTE 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85119.16104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCV7_ECTSI8.480e-3069.09Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A6H5KPB3_9PHAE6.030e-2968.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEW5_9STRA2.020e-1155.56Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9D1R7_9STRA4.620e-840.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A024G688_9STRA5.490e-543.33t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67
NoneNo IPR availableGENE3D1.20.5.110coord: 51..108
e-value: 1.6E-8
score: 36.3
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 47..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85119contigH-elongata_contig85119:2..2013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85119.16104.1mRNA_H-elongata_contig85119.16104.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85119 2..2013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85119.16104.1 ID=prot_H-elongata_contig85119.16104.1|Name=mRNA_H-elongata_contig85119.16104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
GQGELGRRREALGALQRGLGAWRGGSRPPGGFPTSGGGGGKGGGSRLEQQ
RETMREHERMLAELGQGVGRLKTQSTLINEETSLHVRLLDDMEGNAATAA
AGLRNEAR
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