prot_H-elongata_contig85114.16103.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85114.16103.1
Unique Nameprot_H-elongata_contig85114.16103.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: D8LJ82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ82_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.400e-79
Identity = 128/167 (76.65%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDSQLGETMADMVARLG-----VVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEKALGDDD+DVIYLNGWVAVFQFL+ LLFAVPSA+AMGLPV+ELPRNTYEGYLCF+G +S   + MA+M A  G     ++  DHC  AP +V+LYLCFN++YN+VLIVILK+GSANVLFLASTVMVPIGNVAFSLKFVPHHQDL  SDTMGL+FIL+G
Sbjct:  180 MCLSSVYKEKALGDDDMDVIYLNGWVAVFQFLSSLLFAVPSAYAMGLPVAELPRNTYEGYLCFMGENSHFTD-MANMAATTGGRISDMIPPDHCETAPFFVTLYLCFNLVYNVVLIVILKHGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLHWSDTMGLLFILSG 345          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A6H5K4Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Y7_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 6.330e-79
Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDSQLGETMADMVARLG-----VVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEKALGDDD+DVIYLNGWVAVFQFLA LLFAVPSA+AMGLPV+ELP+NTYEGYLCF+G +S   + MA+M A  G     ++  DHC  AP +V+LYLCFN++YN+VLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDL  SDTMGL+FIL+G
Sbjct:  302 MCLSSVYKEKALGDDDMDVIYLNGWVAVFQFLASLLFAVPSAYAMGLPVAELPQNTYEGYLCFMGENSHFTD-MANMAATTGGNIADMIPPDHCETAPFFVTLYLCFNLVYNVVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLHWSDTMGLLFILSG 467          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A836CGK6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGK6_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.500e-58
Identity = 107/195 (54.87%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDSQLGETMADMVAR---------------------------------LGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEKALG+ DIDV++LNGWVAV+QFLA ++FA PSA+AMGLP++ELP NTY G+LCFLG ++ L                                           + +  +DHC +AP++V+ YL FNI YN+VLIVILKYGSANVL+LASTVMVPIGNVAFSL FVP HQDL+ +D  GL  IL G
Sbjct:  257 MCLSSVYKEKALGELDIDVVFLNGWVAVYQFLASVVFAAPSAYAMGLPLAELPENTYSGWLCFLGQNTALPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETMSMPHMDHCELAPLFVTTYLVFNIAYNVVLIVILKYGSANVLWLASTVMVPIGNVAFSLHFVPGHQDLRPADMGGLALILGG 451          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A7S1XX65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX65_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.780e-50
Identity = 91/166 (54.82%), Postives = 123/166 (74.10%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDS-QLGETMADMVARLGV---VLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEKALG+ DIDV+YLNGWVA FQFLA LL A PSA AM LP+SELP NT EG+ C++G++  ++ E + +  +R G+   +    C+ AP +VS YL FN+  N+++IVILKYGSAN+L+++ST +VP+ NV FSL F+P+ + L  +D  GLV I+ G
Sbjct:  312 MCLSSVYKEKALGEADIDVVYLNGWVAFFQFLATLLTAWPSAIAMQLPLSELPANTIEGFWCWMGYNPPEVEEALMNEASRSGLYDDLGAADCKYAPFFVSSYLVFNLALNILMIVILKYGSANILYMSSTALVPLSNVVFSLPFMPNARPLHTADVEGLVLIMAG 477          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A485K7Q2_9STRA (Aste57867_403 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7Q2_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.920e-48
Identity = 82/164 (50.00%), Postives = 117/164 (71.34%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPV--SELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKE ALG+ ++D +YLNGW+AVFQFL  +  A+P+A     PV   +LP N Y+G+LC+LGH++  G    D            C+MAP+YV++Y+ FN+ YNL++I++LK+GSAN+L+LA T+MVP+GNVAF+  F+P H+ L  +D +GLV I+ G
Sbjct:  177 MCLSSVYKEIALGEAELDAVYLNGWIAVFQFLLSIPLAIPAAMIGSPPVVPKDLPTNLYDGWLCYLGHNTITGGDHPD-----------DCKMAPLYVTIYMIFNVGYNLLIILMLKFGSANILWLAMTIMVPLGNVAFTFPFMPEHKPLHTTDVIGLVVIMLG 329          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A3F2RYX5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYX5_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.300e-48
Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPV--SELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEK LG+ ++D +YLNGW+AVFQFL  +    P+A     PV  SELP N Y+G +C+LG D     T+ D   +      D C  A VYV+ YL FN++YNL++I+ILK+GSAN+L+LA T+MVP+GNVAF+  F+P HQ L   D  GLVFI+TG
Sbjct:  180 MCLSSVYKEKTLGEAELDAVYLNGWIAVFQFLFSIPLTFPAAMVGDHPVTPSELPENLYDGLMCYLGQD-----TIIDGPHK------DDCEKATVYVTAYLLFNVVYNLLIILILKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLHAKDIAGLVFIMTG 332          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A7S1MYB1_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MYB1_HEMAN)

HSP 1 Score: 162 bits (410), Expect = 1.280e-47
Identity = 80/162 (49.38%), Postives = 114/162 (70.37%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            M LSSVYKEK + + D+D + LNG++A++QF+A +  A+P+A A G+ + ++P NT  G+ C++G DS    T           L DHC  APV VS+YL FN++YN+++I+I+KYGSAN++F+A T+MVP+GNVAFSL +VP HQDL   D  GL  IL+G
Sbjct:   31 MALSSVYKEKVMNNVDMDAVLLNGYIALYQFIACIPSAIPAALAQGMAIEDIPSNTINGFKCYMGIDSVTNSTDPS--------LDDHCHSAPVDVSVYLGFNVLYNILMILIMKYGSANIMFMALTLMVPMGNVAFSLPWVPGHQDLTPFDYSGLAVILSG 184          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A6G0X121_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X121_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.510e-47
Identity = 84/164 (51.22%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVS--ELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKE ALG+ ++D +YLNGW+AVFQFL  +  AVP+A     PVS  +LP+N Y+G  C+LGH++ L     D            C  A ++V++YL FN+ YNL++I++LK+GSAN+L+LA T+MVP+GNVAF+  F+P HQ LK +D +GLV I+TG
Sbjct:  177 MCLSSVYKEIALGEAELDAVYLNGWIAVFQFLLSIPLAVPAAMIGSPPVSPKDLPKNLYDGMRCYLGHNTILDGPHPD-----------DCEKATLFVTIYLFFNVGYNLLIILMLKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLKTTDVVGLVVIMTG 329          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A7S0YT28_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YT28_9CRYP)

HSP 1 Score: 158 bits (400), Expect = 2.810e-46
Identity = 81/162 (50.00%), Postives = 112/162 (69.14%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVSELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            M LSSVYKEK + + D+D I LNG++A +QFLA +  AVP+A A G+ V ++P NT  G+ C+LG ++ +  T           L DHC  AP+ V+ YL FN+ YN+++I+I+KYGSAN++F+A T+MVP+GNVAFS+ +VP HQDL   D  GL  ILTG
Sbjct:   19 MALSSVYKEKVMNNVDMDAILLNGYIAFYQFLACIPSAVPAALAQGMAVEDIPSNTVAGFRCYLGANTIVNSTDPS--------LDDHCGSAPLDVNAYLAFNVCYNILMILIMKYGSANIMFMALTLMVPMGNVAFSIPWVPGHQDLTPFDYSGLAVILTG 172          
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Match: A0A3M6VT01_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT01_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.470e-46
Identity = 82/164 (50.00%), Postives = 112/164 (68.29%), Query Frame = 0
Query:    1 MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVS--ELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYLCFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKLSDTMGLVFILTG 162
            MCLSSVYKEKALG+ ++D IYLNGW+A+FQF+  +    P++     PVS  ELP N Y+G +C+LG +     T+ D   +      D C  A +YV+ Y+ FN+ YNL++I+ILK+GSAN+L+LA T+MVP+GNVAF+  F+P HQ L   D  GLVFI+ G
Sbjct:  157 MCLSSVYKEKALGETELDAIYLNGWIALFQFVFAIPLTFPASMVGDHPVSPSELPENLYDGLMCYLGQN-----TITDGAHK------DDCEKATIYVTAYMLFNVAYNLLIILILKFGSANILWLAMTIMVPLGNVAFTFPFMPEHQPLHAKDIAGLVFIMLG 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85114.16103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ82_ECTSI3.400e-7976.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4Y7_9PHAE6.330e-7977.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CGK6_9STRA3.500e-5854.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XX65_9STRA7.780e-5054.82Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A485K7Q2_9STRA1.920e-4850.00Aste57867_403 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A3F2RYX5_9STRA3.300e-4853.05Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S1MYB1_HEMAN1.280e-4749.38Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A6G0X121_9STRA1.510e-4751.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S0YT28_9CRYP2.810e-4650.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A3M6VT01_9STRA4.470e-4650.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013936Chloroquine-resistance transporter-likePFAMPF08627CRT-likecoord: 1..162
e-value: 1.3E-42
score: 146.0
NoneNo IPR availablePANTHERPTHR31326FAMILY NOT NAMEDcoord: 2..162
NoneNo IPR availablePANTHERPTHR31326:SF1PROTEIN CLT2, CHLOROPLASTICcoord: 2..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..142
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85114contigH-elongata_contig85114:261..1779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85114.16103.1mRNA_H-elongata_contig85114.16103.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85114 240..1779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85114.16103.1 ID=prot_H-elongata_contig85114.16103.1|Name=mRNA_H-elongata_contig85114.16103.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
MCLSSVYKEKALGDDDIDVIYLNGWVAVFQFLAGLLFAVPSAFAMGLPVS
ELPRNTYEGYLCFLGHDSQLGETMADMVARLGVVLVDHCRMAPVYVSLYL
CFNIMYNLVLIVILKYGSANVLFLASTVMVPIGNVAFSLKFVPHHQDLKL
SDTMGLVFILTGKPKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013936CRT-like