prot_H-elongata_contig8503.16100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8503.16100.1
Unique Nameprot_H-elongata_contig8503.16100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 8.610e-70
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    1 MASGLGNYMMKSMAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDATNQLRGVKDNFVDNFMAGTS 123
            MASGLGNYMMKS+ PSRTGTASPATQLYRAI+KEVPRILTIYD+DMDFAQAR AIA YFRNNG +KDPRVVDALVMKGYM+LEETTMQYKQKTHLLRLLNP A N  R VKD+F+D FMAGTS
Sbjct:    1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDDFMDKFMAGTS 123          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A067CET6_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET6_SAPPC)

HSP 1 Score: 108 bits (271), Expect = 2.810e-28
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0
Query:   22 SPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDAT--NQLRGVKDNF---VDNFMAG 121
            +PA  LYR I+K+VPR+LT+YDI+M+  +AR A+  +FR N ++KDPRV+D L+ K  MELEET MQ+KQK+HLL LL+      N+   V D+F   +DNF AG
Sbjct:    8 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKSHLLTLLDSGVKLQNEKNVVYDDFEEGLDNFFAG 112          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.160e-28
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 0
Query:    7 NYMMKSMAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPD--ATNQLRGVKDNFVDNFMAGT 122
            +YM K   P      +P  QLYR ISKE+PR+LTIYD D+  A+AR  +   FR N  ++DP +VD LV KGYMELEET MQ+KQKTHLLRLL  D  A  + R  K+ F + F++ +
Sbjct:    8 SYMGKEKTP-----RNPVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAADTEAPRKYR-EKNTFTEKFLSNS 119          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.210e-28
Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MASGLGNYMMKSMAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLL 99
            +A GL N + KS      G+ +P   LYR+I +E+PR+LTIYD+DMD A AR  +   FR NG ++DP V+  +V KGYMELEET +Q+KQ+THL+RLL
Sbjct:    1 VAQGLRNAIFKSGGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: K3W7P5_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7P5_GLOUD)

HSP 1 Score: 108 bits (270), Expect = 6.480e-28
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 0
Query:   20 TASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNP------DATNQLRGVKDNFVDNFMAG 121
            T+SPA  LYR I+K+VPR+LT+YDI M+ A+AR A+   FR +  VKDPRVVD L+ K  MELEET MQ+KQK HLL LL        D  N ++ V+D+   NF AG
Sbjct:   14 TSSPAVTLYRYITKQVPRVLTLYDISMEPAEARLAVQALFRKHADVKDPRVVDMLITKANMELEETLMQWKQKVHLLTLLESGAALRADKKNDVKTVEDSLA-NFYAG 120          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.100e-27
Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   22 SPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDATNQLRGVKDNFVDNFMAGT 122
            +P  QLYR I KE+PR++ IYD+DM   +A  AIA +FR +  VKD RV+D LV KGYM +EE TMQYKQKTHL+ +L+P   ++     + F + F  GT
Sbjct:   18 NPVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEPETFEEKFYKGT 118          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A485LSK2_9STRA (Aste57867_25210 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSK2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.710e-27
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   13 MAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDATNQLRGVKDNFVDNFMAG 121
            +A  + G ++PA  LYR I+K+VPR+LT+YDI M+ AQAR A+  +FR N  VKDPRVVD L+ K  MELEET MQ+KQK HL  LL  D+  +L   K    D +  G
Sbjct:    5 LAAEKLGGSTPAVTLYRQITKQVPRVLTLYDISMEPAQARLAVQAFFRKNADVKDPRVVDMLITKAGMELEETLMQWKQKAHLQTLL--DSGVKLNDNKAKVFDEYEEG 111          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A1V9YKZ4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKZ4_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.710e-27
Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   22 SPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDATNQLRGVKDNF-------VDNFMAG 121
            +PA  LYR I+K+VPR+LT+YDI+M+  +AR A+  +FR N ++KDPRV+D L+ K  MELEET MQ+KQK HL+ LL+  A  +L+  KD+        +DNF AG
Sbjct:   14 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKAHLVTLLDSGA--KLQAEKDSVFDEYEDGLDNFFAG 118          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A6G0XRI9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRI9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.840e-27
Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = 0
Query:   13 MAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDATNQLRGVKDNFVD-------NFMAG 121
            +A  + G ++PA  LYR I+K+VPR+LT+YDI+M+ ++AR A+  +FR N  VKDPRVVD L+ K  MELEET MQ+KQK HL  LL  D+  +L+  K   VD       NF AG
Sbjct:    5 LAAEKLGGSNPAVTLYRQITKQVPRVLTLYDINMEPSEARLAVQAFFRKNADVKDPRVVDMLITKAGMELEETLMQWKQKAHLETLL--DSGLKLKNEKLKVVDEDEEGLANFFAG 118          
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Match: A0A0P1B7E0_PLAHL (NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7E0_PLAHL)

HSP 1 Score: 106 bits (264), Expect = 3.960e-27
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   16 SRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLNPDAT---NQLRGVKDNFVDNFMAG 121
            S   TASPA  LYR I+K+VPR+LT+YDI M+ ++AR A+   FR + +VKDPR+VD L+ K  MELEET MQ+KQK HLL LL    T    +L    D  ++ F AG
Sbjct:   11 SAASTASPAVTLYRYITKQVPRVLTLYDISMEPSEARLAVQALFREHAEVKDPRIVDMLITKANMELEETLMQWKQKVHLLTLLERAQTLRQPKLVNSVDQSLEKFFAG 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8503.16100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR2_ECTSI8.610e-7086.18NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A067CET6_SAPPC2.810e-2852.38Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A4D9D5Z3_9STRA3.160e-2850.85Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YPN0_9STRA6.210e-2852.53NADH dehydrogenase (Fragment) n=1 Tax=Tribonema mi... [more]
K3W7P5_GLOUD6.480e-2853.70Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S2XV13_9STRA1.100e-2750.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485LSK2_9STRA2.710e-2751.38Aste57867_25210 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YKZ4_9STRA2.710e-2750.47Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6G0XRI9_9STRA3.840e-2750.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A0P1B7E0_PLAHL3.960e-2751.38NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 24..84
e-value: 8.8E-5
score: 22.5
NoneNo IPR availablePANTHERPTHR12964:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6coord: 22..121
IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6PANTHERPTHR12964NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNITcoord: 22..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8503contigH-elongata_contig8503:2036..7420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8503.16100.1mRNA_H-elongata_contig8503.16100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8503 2036..7420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8503.16100.1 ID=prot_H-elongata_contig8503.16100.1|Name=mRNA_H-elongata_contig8503.16100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MASGLGNYMMKSMAPSRTGTASPATQLYRAISKEVPRILTIYDIDMDFAQ
ARTAIANYFRNNGQVKDPRVVDALVMKGYMELEETTMQYKQKTHLLRLLN
PDATNQLRGVKDNFVDNFMAGTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR
IPR016488NADH_Ub_cplx-1_asu_su-6