mRNA_H-elongata_contig84937.16090.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: D8LL52_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI) HSP 1 Score: 167 bits (423), Expect = 2.730e-48 Identity = 73/113 (64.60%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 7 RDGDVAQDTMPPTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
++G + D MPPTVFCYHPHGVFTQ Y++NGS+N+ELP I GLLA+ L++AP+F+LV GRW CAP+SK+ F+D M+K SF IIPGGFQEA++SKLG DRVW+K R+G VK
Sbjct: 154 KEGPESWDNMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLVK 266
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A7S4D9T5_HETAK (Acyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T5_HETAK) HSP 1 Score: 112 bits (281), Expect = 1.280e-27 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 49 FCYHPHGVFTQSYLLNGSINEELPDIYGLLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
FCYHPHGV + ++LN ++G++A L YAP++ V RW PASKK+ MEK SF IIPGGF+EA+ISKLG RV+LKKR+GFVK
Sbjct: 129 FCYHPHGVLSWGFVLNAGFRHFFEPLFGVVADALCYAPLWYWFVTRWTKAVRPASKKHMTRYMEKGESFGIIPGGFEEATISKLGAQRVYLKKRKGFVK 227
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A836CL97_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL97_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.100e-22 Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 37 PPTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
P T+ CYHPHGV + S++LNG +E GL+ L++AP F+ + W A+K NF LM+ + +IPGG +EA+IS G DRV+LK R+GF+K
Sbjct: 116 PGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIK 218
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A6B2LGP4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LGP4_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 1.910e-17 Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 7 RDGDVAQDTMPPTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
D D+ PT+ C HPHG+F + + + EE D++ +S L+ +P F+ V+ + +P K +LM+K+ + A+IPGGF+EAS+ GTD ++LK R+GFVK
Sbjct: 4 EDKDLLSGQKGPTLLCVHPHGIFCLGWGIMFA-REETKDVHFCFSSALYQSPFFR-VLSMLIGKPSPVDKDTISNLMKKKANLALIPGGFEEASLFVKGTDVIYLKHRKGFVK 114
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A7S2CE87_9STRA (Acyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE87_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.060e-17 Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 43 TVFCYHPHGVFTQSYLLNGSINEELPDIYG--LLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
++ CYHPHG + NG+ EL I L+ +L +AP+F ++ RW+ A N LM++ ++ IIPGGF++A+I K G++R+WLKKR+GF+K
Sbjct: 118 SMLCYHPHGALCVGFSWNGAHAPELKHIPAKWLVVDVLMHAPLFGRIL-RWIGNVGGADAGNMKRLMKEGSNIGIIPGGFEDATIMKKGSERIWLKKRKGFIK 219
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A0G4FZ23_9ALVE (Acyltransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FZ23_9ALVE) HSP 1 Score: 79.0 bits (193), Expect = 1.020e-14 Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 40 PTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASILHYA-PMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
PT+ C HPHG+FT + G + E + D + A L++ P+ +L++ L A AS+ + LM + +FAIIPGGF EA I+K TDRV+L KR+GFVK
Sbjct: 245 PTMVCLHPHGIFTLGLTMLGPLFE-VKDFTLVFAHFLYWLQPVLRLLLDPILKT-ASASRASVNALMRSKRNFAIIPGGFHEAVITKRATDRVFLSKRKGFVK 345
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A7S1LXL7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LXL7_ALECA) HSP 1 Score: 73.6 bits (179), Expect = 3.830e-14 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 37 PPTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASIL-HYAPMFQLVVGRWLNV-CAPASKKNFIDLMEKRTS-FAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
P +FC HPHGV++ L ++E PD+ L + L H+AP+F++ +L + ++ + M+ S A++PGGF EA+IS+ G +RV+LK RRGFVK
Sbjct: 8 PRQLFCIHPHGVYSLGVL---QLSENRPDVRVLSSPYLYHFAPVFRIFAESFLGIKMGSVARGDLTKYMKAGESPLALVPGGFHEATISRPGHERVYLKTRRGFVK 110
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A1V9ZWB6_9STRA (Acyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWB6_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.680e-13 Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 28 DTMPPT-----VFCYHPHGVFTQSYLLNGSINEELPD--IYGLLASILHYAPMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVKVLM 354
D PP + YHPHGV + + NG +E + + L++ +L P+ ++ W C PA K+NF L K+ + A+IPGG++EA+ K G +V+LKKR+GF+K+ +
Sbjct: 84 DAAPPAPDSKALLAYHPHGVLSCGWTSNGIGSESFANSKVEWLVSDVLFNLPVMGDMIS-WAG-CGPAGKENFEKLCSKKHNIALIPGGYEEATHFKHGQHQVYLKKRKGFIKLAL 197
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A7S1JTW8_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JTW8_9ALVE) HSP 1 Score: 73.9 bits (180), Expect = 2.850e-13 Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 25 QDTMPPTVFCYHPHGVFTQSYLLNGSINEELPDIYG--LLASILHY-APMFQLVVGRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
+D PPTV C HPHG+F ++ S N +L + + +S L+Y AP ++ + V A K++F + M++ + ++PGGF EA+IS DRV+L+KR+GFVK
Sbjct: 28 KDGKPPTVICCHPHGIFAAGVVVLTS-NGDLSGLKARTITSSFLYYFAPTLRIFLAP-AGVLGAARKEDFTNYMKRGENMTMVPGGFHEATISCPHKDRVYLRKRKGFVK 135
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Match: A0A7S0JIW8_9EUKA (Acyltransferase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIW8_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 4.540e-13 Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 13 GDVAQDTMPPTVFCYHPHGVFTQSYLLNGSINEEL----------PDIYGLLASILHYAPMFQLVV---GRWLNVCAPASKKNFIDLMEKRTSFAIIPGGFQEASISKLGTDRVWLKKRRGFVK 345
G +A P T++CYHPHG+ +++NG + P I+ + +++ + F+++ GR ASK + M++ + AIIPGGF++A+I K G DR ++K+R+GFVK
Sbjct: 93 GALASMGAPRTLYCYHPHGILAAGFVVNGCWSSHFHTLVDERTGEPTIFLVASNLREWGTFFKVLCDLSGR----LGSASKLQIMRWMQQGRNLAIIPGGFEDATIFKNGLDRTFIKRRKGFVK 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84937.16090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84937.16090.1 >prot_H-elongata_contig84937.16090.1 ID=prot_H-elongata_contig84937.16090.1|Name=mRNA_H-elongata_contig84937.16090.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MGRDGDVAQDTMPPTVFCYHPHGVFTQSYLLNGSINEELPDIYGLLASILback to top mRNA from alignment at H-elongata_contig84937:1337..2665- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84937.16090.1 ID=mRNA_H-elongata_contig84937.16090.1|Name=mRNA_H-elongata_contig84937.16090.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1329bp|location=Sequence derived from alignment at H-elongata_contig84937:1337..2665- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84937:1337..2665- >mRNA_H-elongata_contig84937.16090.1 ID=mRNA_H-elongata_contig84937.16090.1|Name=mRNA_H-elongata_contig84937.16090.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig84937:1337..2665- (Himanthalia elongata Himel1 dioecious)back to top |