prot_H-elongata_contig8485.16082.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8485.16082.1
Unique Nameprot_H-elongata_contig8485.16082.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: D7G2Z0_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z0_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 2.250e-120
Identity = 189/217 (87.10%), Postives = 207/217 (95.39%), Query Frame = 0
Query:    1 MVTFDESEAERERDVEDATREVTALFRRSEKQLKQLMAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHS 217
            MVTFDESEAERERDVEDATREVTALFRR+E+QLK LM ES+GLT AEATVRNNIQRATARKLQSLS GFR+SQKDYLRRLQ+QKKGD AFDFLAEE+RA+K+AKGRLDPGFN+QQMAVLEDTE++VGQRD EINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGV+QLQRAEE+Q+SALP+KCI  LV L ++MLG+LVWKHS
Sbjct:   90 MVTFDESEAERERDVEDATREVTALFRRAERQLKHLMGESAGLTPAEATVRNNIQRATARKLQSLSGGFRTSQKDYLRRLQAQKKGDGAFDFLAEEERASKHAKGRLDPGFNEQQMAVLEDTEVLVGQRDGEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVSQLQRAEEHQKSALPLKCIGILVVLIIIMLGLLVWKHS 306          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A835YLG5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLG5_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.220e-79
Identity = 141/222 (63.51%), Postives = 178/222 (80.18%), Query Frame = 0
Query:    1 MVTFDE-SEAERERDVEDATREVTALFRRSEKQLKQLMAESSG-LTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKG---RLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHS 217
            MVTFD+ SE  +ERD+E  T+E+T +FR +E++LK++M E  G  T+AEATVR N+Q+ATARKLQ+LS  FRSSQKDYLRRL+ QK+G   FDFLA E++AA  A      +  GFNQ QMAVLE+TE  V +RDAEI NIVKSIE+LS IFKELAV+VIDQGT+LDRID+NMEQVVEHT+EGV QLQ+AEE+Q+SA+P+KCI  LV L  +M+ +L+ KH+
Sbjct:   87 MVTFDDASEQSKERDIEFMTQEITQIFRHAERELKKIMTEGGGGRTEAEATVRTNLQKATARKLQNLSMAFRSSQKDYLRRLKLQKEGGQDFDFLAVEEKAAAKAAAAGVNMSSGFNQAQMAVLEETESYVQERDAEIRNIVKSIEELSAIFKELAVMVIDQGTMLDRIDYNMEQVVEHTKEGVVQLQKAEEHQKSAMPLKCIAVLVFLIFVMVIVLILKHT 308          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A836CM56_9STRA (Soluble NSF attachment protein receptor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM56_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.250e-69
Identity = 130/218 (59.63%), Postives = 166/218 (76.15%), Query Frame = 0
Query:    1 MVTFDE-SEAERERDVEDATREVTALFRRSEKQLKQLMAESSGL-TQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKH 216
            MV+FD+ SE  +E+++E  T+E+T +FR +E++LK ++ +  G  T A+ATVR NIQRATARKLQ+LS  FRS+QKDYL RL+ QK+G   FDFLA E+RAA  AK  +   ++Q Q+AVLE++E  V +RDAEI NIVKSIE+LS IFKELAVLVIDQGTILDRIDFNMEQVVEHT++GV QL RAEE Q++A+P+KCI  L+          V KH
Sbjct:   87 MVSFDDVSEQHKEKEIELMTQEITQIFRHAERELKAIVGDGGGARTAADATVRGNIQRATARKLQALSIAFRSAQKDYLVRLKRQKEGGHEFDFLAVEERAA--AKVGMSAAYDQAQLAVLEESESYVQERDAEIRNIVKSIEELSMIFKELAVLVIDQGTILDRIDFNMEQVVEHTKDGVAQLHRAEESQKAAMPVKCIAALLXXXXXXXXXXVLKH 302          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A7S3XU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU54_HETAK)

HSP 1 Score: 216 bits (551), Expect = 6.280e-67
Identity = 128/208 (61.54%), Postives = 160/208 (76.92%), Query Frame = 0
Query:    1 MVTFDES-EAERERDVEDATREVTALFRRSEKQLKQLMAESS----GLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVS 203
            MVTFDE  EA+R+R+++ AT  VT LFR +E  L+Q+  E      G  QA+A VR NIQR+ ARKLQSLS  FR+SQK+YL R+++QK GDD FDFL+EE     +   R D GF  QQMAVLEDTE +V +RD EIN+IV+SIE+LSTIFKELAVLVIDQGT+LDRID+NME VVE T+EG+TQL++AE+ Q+SA P+KCI  LV+
Sbjct:   29 MVTFDEGHEADRDREIDQATAAVTGLFRHAEGVLRQVGTEGKAAGGGGGQADARVRENIQRSLARKLQSLSMNFRNSQKEYLIRVKAQKTGDDTFDFLSEEKNKPDFGLDR-DTGFTAQQMAVLEDTETLVQERDQEINHIVQSIEELSTIFKELAVLVIDQGTVLDRIDYNMELVVESTKEGITQLEKAEKNQKSARPLKCIAFLVA 235          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A7S3GW24_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW24_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.550e-62
Identity = 117/223 (52.47%), Postives = 153/223 (68.61%), Query Frame = 0
Query:    1 MVTFDESEAERERDVEDATREVTALFRRSEKQLKQL--MAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQK--KGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHSGN 219
            MV F+  EA +ER+++  TRE+T LF  +E  LK+    +E   L+ A+ TVR N+Q + ARK+Q LS  FRS+QK Y+ ++Q+QK  +G  A DFL E  +     +   D GF+  QM +LEDTE  V +RD EI  I KSIE+L+ IFKELAVLVIDQGTILDRID+NME  VEH REGV QL +AEE+Q++ L IKCI  LV    +M+G+L+WKHSG 
Sbjct:   85 MVNFETDEAHQEREIDGKTREITDLFHHAENVLKRFGKQSEDPNLSVADRTVRKNMQMSMARKIQGLSMSFRSTQKQYMMKVQNQKHGQGGHALDFLNEPSKKPAEFQAEEDLGFDAMQMRILEDTEQEVNRRDEEITKIAKSIEELAAIFKELAVLVIDQGTILDRIDYNMENAVEHAREGVKQLHKAEEHQKANLAIKCIILLVIXXXIMIGVLIWKHSGK 307          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A7S0SYL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYL7_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.160e-61
Identity = 112/221 (50.68%), Postives = 153/221 (69.23%), Query Frame = 0
Query:    1 MVTFDESEAERERDVEDATREVTALFRRSEKQLKQL--MAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHSGN 219
            MV F+  E ++ER+++  T+E+T LFR +EK L++     + +  +  E  VRNNIQR+ A+KLQSLS  FR SQ +Y+ +L +QK G+D F +L   D+      G +D G   QQ+ +++DTE +V QRD EI  I KSI++L+ IF ELAVLVIDQGTILDRID+NME  V H  EG+ QL +A E+Q++ALP +CI  LV L  +MLGIL+WKHSGN
Sbjct:   92 MVNFETDELQQEREIDIKTQEITTLFRSAEKLLQKFSTQGDENKTSAEELKVRNNIQRSNAKKLQSLSQSFRQSQSEYMTKLNAQKSGNDDFKYL---DKRVAAPVGDIDVGMTTQQIQMIDDTEELVNQRDEEIKRIAKSIQELAQIFNELAVLVIDQGTILDRIDYNMESAVAHATEGIVQLNKANEHQKNALPFRCIIVLVILIAIMLGILIWKHSGN 309          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A482SBF2_9ARCH (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBF2_9ARCH)

HSP 1 Score: 194 bits (494), Expect = 4.980e-59
Identity = 113/222 (50.90%), Postives = 148/222 (66.67%), Query Frame = 0
Query:    2 VTFDESEAERERDVEDATREVTALFRRSEKQLKQL--MAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDA--FDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHSGN 219
            V F+  E ++ER+++  TRE+T +F  +E  LK+    +E+ GLT  E  VR N+Q + A+KLQ LS  FRS+QK Y+ +LQ QK G  A   DFL E  + A  A G +D GF   QM VLED E +V QRD EI  I KSIE+L+ IF+ELAVLVIDQGTILDRID+NME  VEH +EG+ QL  AE +Q++A+  KCI  LV L ++ + IL+WKH   
Sbjct:   14 VDFETDETQQEREIDAKTREITEVFHHAENLLKRFGKQSEAPGLTGEERAVRKNMQMSMAKKLQGLSMSFRSTQKQYMTQLQDQKNGGGAPSLDFLNETKKPAAEAGGFVDQGFQGVQMNVLEDIEDIVNQRDEEITRIAKSIEELAQIFRELAVLVIDQGTILDRIDYNMENAVEHAKEGLKQLNEAETHQKNAMSTKCIIVLVILIIIFMSILIWKHDSK 235          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A7S3JZH1_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZH1_9STRA)

HSP 1 Score: 194 bits (493), Expect = 8.540e-58
Identity = 116/220 (52.73%), Postives = 153/220 (69.55%), Query Frame = 0
Query:    1 MVTFDES-EAERERDVEDATREVTALFRRSEKQLKQLMAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKG--DDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHS 217
            MV+FD++ EA  ++++E  TRE T LFR  E  LK++    + L+ +E T+R NIQR  A ++Q L+  FR SQ +YL RL+ QK+G  D  FDFL+    A  YA      GFN+QQ+  + D E +V +RD EI  I +SI++LSTIFKELAVLVIDQGTILDRIDFNMEQV EHTR+GV ++++AE+YQ++A P  CI  L+ LN LML  LV KHS
Sbjct:   94 MVSFDDANEAAMDQEIEGKTREATRLFRSCESSLKRIALTGNDLSDSERTIRANIQRGMALRIQRLNQDFRRSQGEYLSRLKRQKEGANDATFDFLSGGQAAVDYAVQDDSGGFNEQQIQAVADIEALVVERDEEIRKIAESIQELSTIFKELAVLVIDQGTILDRIDFNMEQVAEHTRKGVIEIEKAEQYQKAARPRICIALLLFLNALMLIFLVLKHS 313          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: A0A7S2SRN9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRN9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.400e-54
Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 0
Query:    1 MVTFDESEAERERDVEDATREVTALFRRSEKQLKQLMAESSGLTQAEATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKK---GDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHS 217
            MVTFDESEA R+R+++  TR +T  FR  E  LK++  +S G  +++A VR NIQRATA+KLQ  S  FRS QKDY+R+L+ QK    G    DFL E  R +  A+     G  Q+Q+  +E  E +  +RD EI  I +SIE+LS IFKELAVLVIDQGTILDRIDFNMEQVVEHT+EG+ QL  AE++Q+SA P+KCI            +L+ KHS
Sbjct:   83 MVTFDESEARRDREIQSKTRAITDCFRHMEVSLKRVANDSDG-DESDAKVRGNIQRATAKKLQERSHKFRSMQKDYMRKLRLQKNRTSGGGELDFLTEPPRPSDRARML---GLTQEQVNEVEHVEALANERDEEIAQIAQSIEELSQIFKELAVLVIDQGTILDRIDFNMEQVVEHTQEGLGQLGVAEKHQKSARPMKCIIXXXXXXXXXXALLILKHS 298          
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Match: F0WW35_9STRA (Syntaxinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WW35_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.090e-54
Identity = 109/218 (50.00%), Postives = 152/218 (69.72%), Query Frame = 0
Query:    1 MVTFDESEAERERDVEDATREVTALFRRSEKQLKQLMAESSGLTQA-EATVRNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAAKYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKELAVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICGLVSLNLLMLGILVWKHS 217
            MV FD SE++ E+++E  T+E    FR++EK LK +++ S   T A ++  + N+Q A A +LQ+LS+ FR SQK YL R+++QK+G   FDFL+E     K A   ++ GF+Q QM  ++  E ++ +RD EI  I  SI +L+TIFKELAVLVIDQGTILDRID+NMEQVVEHT +GV +L++AE+ Q+S  P+KCI  L+ L  LM  +LV KHS
Sbjct:   87 MVRFDGSESQNEQEIEQITKEXXQEFRKAEKVLKSMVSHSQNDTSAADSKAQQNVQTALATQLQTLSSDFRKSQKQYLLRVKNQKQGPVEFDFLSETSAVGKRAV--MEMGFDQTQMTDVDIAEDIINERDVEIQKIATSITELATIFKELAVLVIDQGTILDRIDYNMEQVVEHTEKGVLELEKAEQTQKSGGPMKCIGLLLGLIFLMTAVLVLKHS 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8485.16082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z0_ECTSI2.250e-12087.10Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YLG5_9STRA1.220e-7963.51Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A836CM56_9STRA1.250e-6959.63Soluble NSF attachment protein receptor (Fragment)... [more]
A0A7S3XU54_HETAK6.280e-6761.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3GW24_9STRA2.550e-6252.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0SYL7_9STRA2.160e-6150.68Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A482SBF2_9ARCH4.980e-5950.90t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3JZH1_9STRA8.540e-5852.73Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2SRN9_9STRA1.400e-5452.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0WW35_9STRA2.090e-5450.00Syntaxinlike protein putative n=1 Tax=Albugo laiba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 118..185
e-value: 4.8E-12
score: 56.0
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 159..204
e-value: 4.9E-11
score: 42.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 123..185
score: 15.633
NoneNo IPR availableGENE3D1.20.58.70coord: 1..177
e-value: 1.1E-25
score: 92.4
NoneNo IPR availablePANTHERPTHR19957:SF249SYNTAXIN-42coord: 6..211
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 6..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..192
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
IPR006012Syntaxin/epimorphin, conserved sitePROSITEPS00914SYNTAXINcoord: 129..168
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 10..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8485contigH-elongata_contig8485:1038..4365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8485.16082.1mRNA_H-elongata_contig8485.16082.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8485 1003..5925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8485.16082.1 ID=prot_H-elongata_contig8485.16082.1|Name=mRNA_H-elongata_contig8485.16082.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
MVTFDESEAERERDVEDATREVTALFRRSEKQLKQLMAESSGLTQAEATV
RNNIQRATARKLQSLSAGFRSSQKDYLRRLQSQKKGDDAFDFLAEEDRAA
KYAKGRLDPGFNQQQMAVLEDTELVVGQRDAEINNIVKSIEDLSTIFKEL
AVLVIDQGTILDRIDFNMEQVVEHTREGVTQLQRAEEYQRSALPIKCICG
LVSLNLLMLGILVWKHSGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006012Syntaxin/epimorphin_CS
IPR010989SNARE