prot_H-elongata_contig8483.16081.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig8483.16081.1
Unique Name	prot_H-elongata_contig8483.16081.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	110

Homology

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: D7FIR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR1_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.830e-48
Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0

Query:    1 MFAAAKNLGDGGGGMGDLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARR---SIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGN 99
            MFAAAKNLG G  GMGDLLTRLRAREKARH  QAKKDVDSSGLPIMTAAA+RQAR    +IDD+GYETPELND LYLHFKGYR IQNL+PYTSLKALWLGGN
Sbjct:    1 MFAAAKNLGQGADGMGDLLTRLRAREKARHGVQAKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFKGYRKIQNLDPYTSLKALWLGGN 102

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A6H5KFG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG8_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 3.050e-42
Identity = 86/130 (66.15%), Postives = 89/130 (68.46%), Query Frame = 0

Query:    1 MFAAAKNLGDGGGGMGDLLTRLRAREKARHSEQ-------------------------------AKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGN 99
            MFAAAKNLG G  GMGDLLTRLRAREKARH  Q                               AKKDVDSSGLPIMTAAA+RQ   +IDD+GYETPELND LYLHFKGYR IQNLEPYTSLKALWLGGN
Sbjct:    1 MFAAAKNLGQGADGMGDLLTRLRAREKARHGAQVQVVERTTSVAYVERRWIQWMKVAHTFEAACAKKDVDSSGLPIMTAAALRQV--AIDDEGYETPELNDRLYLHFKGYRKIQNLEPYTSLKALWLGGN 128

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A836CBU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.490e-23
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 0

Query:   19 LTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLG 97
              +LR REKAR +E A++     GLP+MT  AIRQA  +++D+GYETPELND LYLHFKGYR I+NLEPYT++KALWLG
Sbjct:   13 FNKLREREKAR-TEAAQRA--KGGLPVMTPDAIRQA--ALEDNGYETPELNDRLYLHFKGYRRIENLEPYTAVKALWLG 86

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A1V9ZFA3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFA3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.360e-17
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNGI 101
            DLL RLR +++    E+ K       LP+M    + Q    +D+DGYETPELND+LY+HFKG++ I+ LEPY +LKALWL  N +
Sbjct:   10 DLLERLRKKDREILREKQK-----GQLPVMDLETLTQI--CVDNDGYETPELNDNLYVHFKGFQKIEGLEPYFNLKALWLESNNL 87

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A2D4BY29_PYTIN (Peroxin-5 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY29_PYTIN)

HSP 1 Score: 84.7 bits (208), Expect = 7.430e-17
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGN 99
            D   RLRAREK R  E+ K       +P+M A  +++    +D+DGYETPELND+LY HF+G++ I+ L PY +LKALWL  N
Sbjct:  675 DTFDRLRAREKERFREERK-----GRIPVMDAETLKEL--CLDNDGYETPELNDNLYAHFQGFQKIEGLAPYYNLKALWLESN 750

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A8K1FKW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKW3_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 1.310e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGN 99
            +   RLR REK R  E+ K       +P+M A  +++    +D+DGYETPELND+LY HF+G++ I+ LEPY +LKALWL  N
Sbjct:    7 ETFERLREREKQRFREERK-----GKIPVMDAETLKEL--CVDNDGYETPELNDNLYAHFQGFQKIEGLEPYFNLKALWLESN 82

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A1Y3NUU8_PIRSE (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NUU8_PIRSE)

HSP 1 Score: 78.6 bits (192), Expect = 3.370e-16
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query:   36 KDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNGISDIQGIGHL 110
            ++VD  G  +MT   I+Q  R  +   Y TPELND +YLH+KG+  I+NL  Y  LK+LWL GNGI  I+ +GHL
Sbjct:   15 REVDKKGNTLMTEKYIKQLCR--EQKLYVTPELNDKIYLHYKGFSKIENLTNYIGLKSLWLEGNGIDKIENLGHL 87

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: T0PMI9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PMI9_SAPDV)

HSP 1 Score: 82.4 bits (202), Expect = 4.440e-16
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNGI 101
            DLL RLR +++ +  E+ K       +P+M  A + Q    +D+DGYETPELND+L+ HFKG++ I+ LEP+ +LKALWL  N +
Sbjct:   10 DLLDRLRKKDREKLREKQK-----GQMPVMDLATLTQI--CVDNDGYETPELNDNLFAHFKGFQKIEGLEPFYNLKALWLESNNL 87

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A067C8X6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8X6_SAPPC)

HSP 1 Score: 82.4 bits (202), Expect = 4.450e-16
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNGI 101
            DLL RLR +++ +  E+ K       +P+M  A + Q    +D+DGYETPELND+L+ HFKG++ I+ LEP+ +LKALWL  N +
Sbjct:   10 DLLDRLRKKDREKLREKQK-----GQMPVMDLATLTQI--CVDNDGYETPELNDNLFAHFKGFQKIEGLEPFYNLKALWLESNNL 87

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BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Match: A0A397A7J9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A7J9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.800e-16
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0

Query:   17 DLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAAIRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNGIS 102
            D L RLR R++ +   + K       LP+M    + Q    +D+DGYETP+LND+L+ HFKG++ I+ LEP+ +LKALWL  NG+S
Sbjct:   10 DFLERLRKRDREKLKLKQK-----GHLPVMDRETLVQL--CVDNDGYETPDLNDNLFAHFKGFQKIEGLEPFFNLKALWLESNGLS 88

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8483.16081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIR1_ECTSI	1.830e-48	85.29	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5KFG8_9PHAE	3.050e-42	66.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CBU5_9STRA	1.490e-23	64.56	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A1V9ZFA3_9STRA	2.360e-17	48.24	Uncharacterized protein (Fragment) n=1 Tax=Thraust...	[more]
A0A2D4BY29_PYTIN	7.430e-17	49.40	Peroxin-5 n=1 Tax=Pythium insidiosum TaxID=114742 ...	[more]
A0A8K1FKW3_PYTOL	1.310e-16	48.19	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A1Y3NUU8_PIRSE	3.370e-16	49.33	Uncharacterized protein n=1 Tax=Piromyces sp. (str...	[more]
T0PMI9_SAPDV	4.440e-16	45.88	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]
A0A067C8X6_SAPPC	4.450e-16	45.88	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
A0A397A7J9_9STRA	8.800e-16	45.35	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027734	Dynein assembly factor 1, axonemal	PANTHER	PTHR45973:SF9	DYNEIN ASSEMBLY FACTOR 1, AXONEMAL	coord: 38..109
None	No IPR available	PANTHER	PTHR45973	FAMILY NOT NAMED	coord: 38..109
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 90..110 score: 7.904

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8483	contig	H-elongata_contig8483:438..2787 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8483.16081.1	mRNA_H-elongata_contig8483.16081.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig8483 438..2787 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig8483.16081.1 ID=prot_H-elongata_contig8483.16081.1|Name=mRNA_H-elongata_contig8483.16081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MFAAAKNLGDGGGGMGDLLTRLRAREKARHSEQAKKDVDSSGLPIMTAAA
IRQARRSIDDDGYETPELNDHLYLHFKGYRTIQNLEPYTSLKALWLGGNG
ISDIQGIGHL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027734	DNAAF1
IPR001611	Leu-rich_rpt