prot_H-elongata_contig848.16078.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A438HBF3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HBF3_VITVI) HSP 1 Score: 114 bits (285), Expect = 9.590e-26 Identity = 87/278 (31.29%), Postives = 135/278 (48.56%), Query Frame = 0
Query: 2 ENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPEEYQEFPGAVGHLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETFDI-------------------RSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
E + + + S R+I+A A D EL D + L +ID Y+ PE ++ + +K + + VDQC++ K G +++V++V+DIL + + L KF +KD+GDA + + I R+R R H ++ +E D+ R DIA V + R+ NPG H K +++YL KD+ +TY + G L + Y+DSDF CLD++RS S + MLV A+SW S Q + AS T EAE
Sbjct: 89 ETFLPVSSKHSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFE------SNDSKQLENI--VDQCIYLKF-SGCKFIILVLYVDDILLASSDVRLLHETKRFLSSKFDMKDLGDASFVMGIQIYRDRS-RGNKFSLHQCPKNELEKKDMERFPYASTIGSLMYAQVCTRPDIAFIVGMLGRYLSNPGMDHWKKAKWVMRYLQRTKDYMLTYH-RSGHLEIVGYSDSDFTGCLDSKRSTSCYIFMLVGGAVSWKSVKQTLIASSTMEAE 355
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A6A3GLU4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GLU4_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.760e-25 Identity = 69/192 (35.94%), Postives = 109/192 (56.77%), Query Frame = 0
Query: 74 DQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETFDIRS-----DIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
D+CV+ + +G+ E +V ++V+D+L ++ KA + A + +KF++KD+G AR+ L I + + R L I Q Y ES+++ F + V + RF ENPG H A +K+++YLL KD GI Y G G +EAY+D+D+ D RRS+S +LML + W S Q+ A ++EAE
Sbjct: 9 DRCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLCISQKAYTESIIKKFGQENAKPCLTPLEPVAKLSRFLENPGEKHCDAGIKVVRYLLKTKDVGIVYDGLLGTQ-LEAYSDADWAGNQDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAE 198
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A2P4X8N7_9STRA (Mitochondrial protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8N7_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.050e-25 Identity = 67/200 (33.50%), Postives = 110/200 (55.00%), Query Frame = 0
Query: 61 GHLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETFDIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
HL ++ D CV+ + +G +E +V ++V+D+L ++ K + A + +KF++KD+G AR+ L I + + + L I Q Y ES++ R IA AV + R+ ENP H A +K+++YL KD ITY G+ G + AY+D+D+ D RRS+S +LM+ + W S Q+ A ++EAE
Sbjct: 51 AHLKTMGFKAADADPCVYTRG-EGDSECIVCLYVDDMLIASREKDIIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTESIINR--TRPGIAFAVAKLSRYLENPDHRHWDAGIKVVRYLTKTKDAAITYNGRMGTE-LTAYSDADWAGNRDNRRSVSGVMLMMCGAPVVWISTFQKTVALSSTEAE 246
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A2N9FS65_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FS65_FAGSY) HSP 1 Score: 110 bits (276), Expect = 7.200e-24 Identity = 87/288 (30.21%), Postives = 140/288 (48.61%), Query Frame = 0
Query: 2 ENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPEEYQEFPGAVGH------LNKTIYRLTKV----------------------DQCVFRKVVDGKAEVVVV-VHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETFDIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
+ +S + ASIR+IL+ A +D EL D + L ++D E Y+ P ++ A GH L ++IY L + D CV+ K K ++++ ++V+DIL ++ L F++KD+G+A + L ITR+R + L++ Q Y++ ++E I AV V R+ NPGPAH +AV +I++YL D + Y G D RL Y+D+D+ + D R+S S +L A+SW S+ Q A T E+E
Sbjct: 766 DTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFE----AKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLK--RSKRSILILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILE------HICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGGDLRLT--GYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESE 1039
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A6A3WAP3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WAP3_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.800e-23 Identity = 87/314 (27.71%), Postives = 135/314 (42.99%), Query Frame = 0
Query: 2 ENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPE---EYQEFPGAVG----------------------------HLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETF------------------------DIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
E YS + S+R +LA E+ D + L ++ E Y+E+PE E + A G HL + D CV+ + +G+ E +V ++V+D+L ++ KA + A + +K+++KD+G AR+ L I + K R L I Q Y+ES+ + F D A R NPG H A +K+++YLL KD I Y G G +EAY+D+D+ D RRS+S +LML + W S Q+ A ++EAE
Sbjct: 70 ETYSPVAYLNSVRTMLAECGVDGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLDLAEAEGEDDVVCVLLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKYRIKDMGRARFILGIEIDYDMKRRTLGISQKAYIESITKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSL-NPGEKHWDAGIKVVRYLLKTKDVDIVYDGLLGTQ-LEAYSDADWAGNRDDRRSVSGVLLMLCGAPVVWLSTFQKTVALSSTEAE 380
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A438H4A9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H4A9_VITVI) HSP 1 Score: 107 bits (268), Expect = 7.310e-23 Identity = 87/278 (31.29%), Postives = 134/278 (48.20%), Query Frame = 0
Query: 1 MENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPEEYQEFPGAVGHLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNR---KVRELNIDQ----HLYVESMVET-------------FDIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSE 258
M+ +S + S+ +ILA A D EL+ D + L ++ E Y++ PE FP + ++ +DQC++ KV G +V++V+DIL K + L + F +K++G+A Y + I R+R K N+DQ L E M R DIA AV + R+ NP H KA K+++YL KD+ + Y + L + Y+DSDF C+D+R+S S + +LV AISW S Q +TA+ T E
Sbjct: 404 MKTFSLVSKKDSLHIILALVAHFDLELQQMDVKTKFLNGELKEEVYMKQPEG---FPSSDENV---------MDQCIYLKV-SGSKVCFLVLYVDDILLATNDKGLLHELKQFLSKNFDMKNMGEASYVIGIKIHRDRFQVKGDRFNLDQCPKNDLEREQMKNIPYASAIGSLMYAQVRTRPDIAFAVGILGRYQSNPSMDHWKATKKVMRYLQGTKDYKLMYRWRSN-LEVVGYSDSDFAGCVDSRKSTSGYIFILVGGAISWRSVKQTMTATSTME 667
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A6A3XLG1_9STRA (CCHC-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XLG1_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.210e-23 Identity = 88/314 (28.03%), Postives = 137/314 (43.63%), Query Frame = 0
Query: 2 ENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPE---EYQEFPGAVG----------------------------HLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETF------------------------DIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
E YS + SIR +LA + + E+ D + L ++ E Y+E+PE E + A G HL + D CV+ + +G+ E V ++V+D+L ++ KA + A + +KF++KD+G AR+ + I + + R L I Q Y ES+++ F D + RF ENPG H A +K+++YLL KD GI Y G G +EAY+D+D+ D R S+S +LML W S Q+ A ++EAE
Sbjct: 790 ETYSPVAYLNSIRAVLAKCSAEGMEIEQCDVDTAFLYRKLEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDEHLKSMGFEPADADPCVYTRG-EGEDECTVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIIGIEIDYDVERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKVKMNCQLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQ-LEAYSDADWAGNRDDRCSVSGMLLML------WRSTFQKTVALSSTEAE 1095
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A438IVK4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IVK4_VITVI) HSP 1 Score: 103 bits (256), Expect = 1.920e-22 Identity = 75/259 (28.96%), Postives = 122/259 (47.10%), Query Frame = 0
Query: 17 LATAATKDGELRHFDAEQTCLKADIDYEFYIEIPEEYQEFPGAVGHLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSL-----------RCHITRNRKVRELNIDQHLYVES----MVETFDIRSDIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
+A A D EL D + L +ID Y+ PE ++ + ++ VDQC++ K +G +++V++V+DIL + + L KF +K++G+A + L H ++ + ++++ Y + M R DIA V + R+ NP H K +++YL K + +TY + L + Y+DSDF CLD+RRS S + MLV A+SW S Q + AS T EAE
Sbjct: 1 MALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVITSFGFKENTVDQCIYLKF-NGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKNLGNASFVLGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPSMDHWKKAKWVMRYLQRTKAYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLVGGAVSWKSVKQTLIASSTMEAE 257
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A6A3KIP4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3KIP4_9STRA) HSP 1 Score: 104 bits (260), Expect = 8.920e-22 Identity = 89/319 (27.90%), Postives = 139/319 (43.57%), Query Frame = 0
Query: 2 ENYSSMPATASIRMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPE---EYQEFPGAVG----------------------------HLNKTIYRLTKVDQCVFRKVVDGKAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESMVETFD-----------------IRSDIASAVRAVV------------RFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
E YS + SIR +LA + + E+ D + L ++ E Y+E+PE E + A G HL + D CV+ + +G+ E V ++V+D+L ++ KA + A + +KF++KD+G AR+ + I + + R L I Q Y ES+++ F ++D V RF ENPG H A +K+++YLL KD GI Y G G +EAY+D+D+ D R S+S +LML W S Q+ A ++EAE
Sbjct: 560 ETYSPVAYLNSIRAVLAKCSAEGMEIEQCDVDTAFLYRKLEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDEHLKSMGFEPADADPCVYTRG-EGEDECTVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIIGIEIDYDVERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKVKMKSKPYRCQLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQ-LEAYSDADWAGNRDDRCSVSGMLLML------WRSTFQKTVALSSTEAE 870
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Match: A0A5D6XLK3_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLK3_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.370e-21 Identity = 82/287 (28.57%), Postives = 131/287 (45.64%), Query Frame = 0
Query: 14 RMILATAATKDGELRHFDAEQTCLKADIDYEFYIEIPEEYQEFPGAVGHLNKTIYRLTKV----------------------DQCVFRKVVDG-KAEVVVVVHVNDILAHAKGKATMERFAAELGQKFKLKDVGDARYSLRCHITRNRKVRELNIDQHLYVESM---VETFDIRS--------------DIASAVRAVVRFFENPGPAHKKAVMKIIQYLLHAKDWGITYGGQDGRLCMEAYTDSDFGACLDTRRSISDAVLMLVKEAISWYSRMQEVTASGTSEAE 260
R I+ DG FD + L A + YI +P+ V L K++Y L + D CV+ + G + V + ++V+D+L A A + L KF+LKD+G AR+ L +++ + R + + Q Y+ + ++T RS D++ AV ++ R+ ENPG AH KA + +++YL H +D + + GQ ++ + AY DSD+ A D RRS+S V + I + SR Q A TSEAE
Sbjct: 255 RSIVVDERDVDGIYAEFDVDTAFLYAPLKEAVYIAVPDGVDAPESTVLKLRKSLYGLRQASREWNNMFDSALKDIGFSPATADPCVY--IARGERGFVYLCLYVDDLLVGASTVADADAVRQRLLPKFRLKDLGIARFVLGVEVSKQHERRLVTMKQSRYIGDVRFEMKTKPYRSLIGCLLYISACTRPDMSYAVGSLSRYVENPGRAHWKAAIHVLRYLYHTRDLALRFKGQGDKIKLRAYCDSDWAANRDDRRSVSGVVGFAAGDPIIFKSRTQSTVALSTSEAE 539 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig848.16078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig848.16078.1 ID=prot_H-elongata_contig848.16078.1|Name=mRNA_H-elongata_contig848.16078.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bpback to top |