prot_H-elongata_contig84798.16077.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84798.16077.1
Unique Nameprot_H-elongata_contig84798.16077.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length290
Homology
BLAST of mRNA_H-elongata_contig84798.16077.1 vs. uniprot
Match: D7FQ48_ECTSI (HECT-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ48_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 4.480e-82
Identity = 177/324 (54.63%), Postives = 209/324 (64.51%), Query Frame = 0
Query:    1 ALDAVGTLSPPNSTTVRASAIRQGDRLPPXXXXXXXXXXXXXXXXXXSAPLRAAFVAQVLSVPLLPYRIGADGVNLLLRERAVAFVDCLEDFLAEMKASRA---ARGYAGGNAAA---------------------ALGSKPHWDEAFGLPPSPVACCSTETFLLGNVVALGTKLPVDGGNGK--------GAVVVASRVARGQREFMRTVTGLLELKAIPESLLTDRQAITWRE-----GGDGGGTSMTALAVPQAVQNQVRLLVSDRWIRAASRQALEGVNERLLKRCSEEERRENEQTLEVSAANLAIASVQSYRHEVLEG 287
            ALDAVG+LSP  +  + A+ + +                  XXXXXX+ PLRA+FVA++LSVPLLP R+G DGVNLLL+ERA AF DCL DF  EM A+ A   A G  GG   A                       G   HW  AF LPP PV+CCSTE FLLGNVVA+GTK+ V+G            G  + AS   RGQREFMR VT LLEL+AIPESLLTDRQAITW+      GG  GGTSMTALAVPQAVQ+QVRLLVSDRW+R+AS  AL+GVNE+ L+RC+E ER EN++ LE +AANLA+ASVQS+R E   G
Sbjct:  296 ALDAVGSLSPAATVALAAAPLSRSPXX--------------XXXXXXAVPLRASFVAEILSVPLLPSRLGVDGVNLLLKERAEAFFDCLRDFRVEMVAAAAYAAADGEGGGKGRAKGXXXXXSDPGAEEGKRRSRGGAGGAGHWG-AFHLPPPPVSCCSTEAFLLGNVVAMGTKISVEGXXXXXXXXXIDAGGPMTASAARRGQREFMRAVTSLLELRAIPESLLTDRQAITWQSQDGASGGGSGGTSMTALAVPQAVQDQVRLLVSDRWVRSASMLALDGVNEKSLQRCTEAERLENKEVLESNAANLAVASVQSHRAEANRG 604          
BLAST of mRNA_H-elongata_contig84798.16077.1 vs. uniprot
Match: A0A6H5KX73_9PHAE (HECT-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX73_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.330e-41
Identity = 110/242 (45.45%), Postives = 128/242 (52.89%), Query Frame = 0
Query:    1 ALDAVGTLSPPNSTTVRASAIRQGDRLPPXXXXXXXXXXXXXXXXXXSAPLRAAFVAQVLSVPLLPYRIGADGVNLLLRERAVAFVDCLEDFLAEMKASRAARGYAGGNAAA------------------------ALGSKPHWDEAFGLPPSPVACCSTETFLLGNVVALGTKLPVDGGNG--------KGAVVVASRVARGQREFMRTVTGLLELKAIPESLLTDRQAITWREG-GDGGG 209
            ALDAVG+LSP  +  + AS +    R PP                  + PLRA+FVA++LSVPLLP R+G DGVNLLL+ERA AF DCL DF  EM A+ AA G  GG   A                          G   HW   F LPP PV+CCSTE FLLGNVVA+GTK+  +GG G         GA + AS   RGQREFMR VT LLEL+          +  TWR G G GGG
Sbjct:  296 ALDAVGSLSPAATVALAASPL---SRSPPPPSAATA-----------AVPLRASFVAEILSVPLLPSRLGVDGVNLLLKERAEAFFDCLRDFRVEMVAAAAADGERGGKGRAQSAXXXXXXXXGPGAEEGNMRSRGGAGGAGHWG-TFHLPPPPVSCCSTEAFLLGNVVAMGTKISAEGGGGVGGGGRINAGAPMTASAARRGQREFMRAVTSLLELRV---------RGQTWRGGVGVGGG 513          
BLAST of mRNA_H-elongata_contig84798.16077.1 vs. uniprot
Match: A0A6H5KXV6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV6_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.720e-35
Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 0
Query:  187 AIPESLLTDRQAITWRE-----GGDGGGTSMTALAVPQAVQNQVRLLVSDRWIRAASRQALEGVNERLLKRCSEEERRENEQTLEVSAANLAIASVQSYRHEVLEG 287
            AIPESLLTDRQAITW+      GG  GGTSMTALAVPQAVQ+QVRLLVSDRW+R+AS  AL+GVNE+ L+RC+E ER EN++ LE +AANLA+ASVQS+R E   G
Sbjct:    2 AIPESLLTDRQAITWQSQDGASGGGSGGTSMTALAVPQAVQDQVRLLVSDRWVRSASMLALDGVNEKSLQRCTEAERLENKEVLESNAANLAVASVQSHRAEANRG 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84798.16077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ48_ECTSI4.480e-8254.63HECT-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5KX73_9PHAE1.330e-4145.45HECT-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5KXV6_9PHAE4.720e-3569.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84798contigH-elongata_contig84798:186..2547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84798.16077.1mRNA_H-elongata_contig84798.16077.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84798 186..2547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84798.16077.1 ID=prot_H-elongata_contig84798.16077.1|Name=mRNA_H-elongata_contig84798.16077.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bp
ALDAVGTLSPPNSTTVRASAIRQGDRLPPPPHDPPGATGSPAAAAAASAP
LRAAFVAQVLSVPLLPYRIGADGVNLLLRERAVAFVDCLEDFLAEMKASR
AARGYAGGNAAAALGSKPHWDEAFGLPPSPVACCSTETFLLGNVVALGTK
LPVDGGNGKGAVVVASRVARGQREFMRTVTGLLELKAIPESLLTDRQAIT
WREGGDGGGTSMTALAVPQAVQNQVRLLVSDRWIRAASRQALEGVNERLL
KRCSEEERRENEQTLEVSAANLAIASVQSYRHEVLEGNG*
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