mRNA_H-elongata_contig84709.16070.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: D8LCG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCG1_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.140e-31 Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 1
Query: 1 QAAANEVTHRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQPGSD 216
QAAA + THR+ALKAALN+CVRLCVVAPTVNINL+D RSFCSGLPEE+IRAF+E S+LPRFTRVLLQPGS+
Sbjct: 435 QAAAADATHRKALKAALNNCVRLCVVAPTVNINLDDRSRSFCSGLPEERIRAFVEESVLPRFTRVLLQPGSE 506
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A7S3XWJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWJ8_HETAK) HSP 1 Score: 70.5 bits (171), Expect = 4.790e-13 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 25 HRRALKAALNSCVRLCVVAPTVNINLNDHRRSFC--SGLPEEKIRAFIESSLLPRFTRVLLQPGS 213
H++AL+AALNS VRLCVVAPTVN+NL + LPE KIR+F+E +LP+F R+ LQ S
Sbjct: 124 HKQALEAALNSVVRLCVVAPTVNVNLAAPAAPLAMKAPLPESKIRSFVEGEILPKFARIFLQRDS 188
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A6G0XE29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE29_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.930e-8 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 22 THRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
TH +AL+ A+ S VRLCVVAPTVN++L+ S LP++ IR +++ +LP F+ + LQ
Sbjct: 571 THTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKSTLPKDAIRTIVQNDILPVFSSIFLQ 631
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A485KJ64_9STRA (Aste57867_8007 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJ64_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.910e-8 Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 THRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
TH ++L+ A+ S VRLCVVAPTVN++L+ S LP++ IR ++ +LP F+ + LQ
Sbjct: 107 THAKSLEKAMQSLVRLCVVAPTVNVHLSGQVLPCKSVLPKDAIRTIVQKDILPVFSSIFLQ 167
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A1W0A4L8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4L8_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.890e-8 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 THRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
TH +AL+ A+ S VRLCVVAPTVN++L+ S LP + IR+ ++ +LP F+ + LQ
Sbjct: 444 THTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKSVLPTDAIRSIVQKDILPVFSSIFLQ 504
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: W4FDP1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDP1_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 6.760e-8 Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 16 EVTHRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
+ TH +AL+ A+ S VRLCVVAPTVN++L+ + LP++ IR ++ +LP F+ + LQ
Sbjct: 607 QATHTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKTVLPKDAIRTIVQRDILPVFSSIFLQ 669
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A024UK10_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK10_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.260e-7 Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 22 THRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
TH +AL+ A+ S VRLCVVAPTVN++L+ + LP++ IR ++ +LP F+ + LQ
Sbjct: 606 THTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKTVLPKDAIRTIVQRDILPVFSSIFLQ 666
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A7S3HDY8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDY8_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.700e-7 Identity = 22/63 (34.92%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 28 RRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQPGSD 216
++AL+ A+ + VRLCVVAPTVN++++D + F +GL ++ +++F+ + +L +++ + Q G +
Sbjct: 399 KKALEKAITASVRLCVVAPTVNVHVSDKKLKFKAGLSQDSLKSFLSNEVLEKYSFLFKQKGEN 461
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: T0S8Y2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S8Y2_SAPDV) HSP 1 Score: 55.8 bits (133), Expect = 2.360e-7 Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 25 HRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
H +AL+ A+ S VRLCVVAPTVN++L+ S LP + IR+ ++ +LP F+ + LQ
Sbjct: 566 HTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKSVLPTDAIRSIVQKDILPVFSSIFLQ 625
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Match: A0A7S3AGN7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AGN7_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 3.290e-7 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 31 RALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIRAFIESSLLPRFTRVLLQ 204
R L+ AL S VRLCVVAPTVN+ ++ + +P ++I+ +E +LP F +V Q
Sbjct: 44 RGLEEALQSSVRLCVVAPTVNVTFGGQHTNYRATMPRDRIQTILEGQILPGFAQVFTQ 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84709.16070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84709.16070.1 >prot_H-elongata_contig84709.16070.1 ID=prot_H-elongata_contig84709.16070.1|Name=mRNA_H-elongata_contig84709.16070.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp QAAANEVTHRRALKAALNSCVRLCVVAPTVNINLNDHRRSFCSGLPEEKIback to top mRNA from alignment at H-elongata_contig84709:905..1120- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84709.16070.1 ID=mRNA_H-elongata_contig84709.16070.1|Name=mRNA_H-elongata_contig84709.16070.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at H-elongata_contig84709:905..1120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84709:905..1120- >mRNA_H-elongata_contig84709.16070.1 ID=mRNA_H-elongata_contig84709.16070.1|Name=mRNA_H-elongata_contig84709.16070.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig84709:905..1120- (Himanthalia elongata Himel1 dioecious)back to top |