prot_H-elongata_contig84642.16066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84642.16066.1
Unique Nameprot_H-elongata_contig84642.16066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig84642.16066.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.120e-20
Identity = 46/88 (52.27%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    1 AIDTAVFSISNLFRPGTVALDIFGDKETSDARRRCQPDSSDTEGQELFTLHLRVAVLYTVVYGGLMGTPSCRDSIEPLMDNISHPLSL 88
            A+D A FS+ ++F    VALDIFGDKETSDARRRCQP   D +G  LF +HL VA LY   Y G    P C D++  LM+    PLS+
Sbjct:   73 ALDAAQFSLGSMFESNGVALDIFGDKETSDARRRCQPADGDEDGAVLFNMHLGVAGLYMAAYVGSEHMPWCTDTVSALMEAYGAPLSM 160          
BLAST of mRNA_H-elongata_contig84642.16066.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.540e-16
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    1 AIDTAVFSISNLFRPGTVALDIFGDKETSDARRRCQPDSSDTEGQELFTLHLRVAVLYTVVYGGLMGTPSCRDSIEPLMDNISHPLS 87
            AI ++ +S+++ F+P  V L+IFGD++TSD RRRC PD+ +T   ELF+LH +VA LY + +  L   P C   I+PLM  + HP+S
Sbjct:   81 AIQSSSWSVASAFQPPPV-LNIFGDRQTSDERRRCYPDTPETI--ELFSLHYKVAALYVLAHAALKAMPFCHAEIDPLMLGLDHPMS 164          
BLAST of mRNA_H-elongata_contig84642.16066.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.140e-14
Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   12 LFRPGTVALDIFGDKETSDARRRCQPDSSDTEGQELFTLHLRVAVLYTVVYGGLMGTPSCRDSIEPLMDNISHPLSL 88
            +F P  VALDIFGDKETSDARRRCQP +   E + +F LHL V+VLY + Y G    P C + I    + +  P+SL
Sbjct:    1 MFEPNGVALDIFGDKETSDARRRCQPATE--EDRVIFDLHLSVSVLYAISYIGWKYMPYCSEQIAAEAEALGGPMSL 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84642.16066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4I1_9PHAE4.120e-2052.27CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D8LLS4_ECTSI6.540e-1645.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ2_9PHAE7.140e-1450.65CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84642contigH-elongata_contig84642:1595..1858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84642.16066.1mRNA_H-elongata_contig84642.16066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84642 1595..1859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84642.16066.1 ID=prot_H-elongata_contig84642.16066.1|Name=mRNA_H-elongata_contig84642.16066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
AIDTAVFSISNLFRPGTVALDIFGDKETSDARRRCQPDSSDTEGQELFTL
HLRVAVLYTVVYGGLMGTPSCRDSIEPLMDNISHPLSL
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