prot_H-elongata_contig84576.16064.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84576.16064.1
Unique Nameprot_H-elongata_contig84576.16064.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
BLAST of mRNA_H-elongata_contig84576.16064.1 vs. uniprot
Match: D7G4A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A3_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.700e-36
Identity = 81/145 (55.86%), Postives = 93/145 (64.14%), Query Frame = 0
Query:    1 MGEGVRVQEGESEEDFYGADLGGVTMSPGWRTIERDRGRTESASNGVP---PTGDGGPTITSEELRKLTIEHAADNHHENRLNAAYGSGFFGGGLMGAP-----GIAATMQARSRLVDDLLRSGRVQLAGVPISREASALRRLHQ 137
            +GEGVRV+EGE+EE FYG   G +     W    RD  RTE AS          D GP +TSEELR++TI+HA DNHH +  +A  GSGF GGGL G       G  A  QARSR VDDLLRSGRVQ AGVP+ REA+AL RLHQ
Sbjct:    6 VGEGVRVKEGETEEAFYGEAFG-LGRRRRWAGPRRDGTRTERASRTTDRGQQEHDHGPRMTSEELRRITIDHAGDNHHVDPWDAGAGSGFLGGGLGGGRRGRFGGAEAASQARSRRVDDLLRSGRVQFAGVPVYREAAALLRLHQ 149          
BLAST of mRNA_H-elongata_contig84576.16064.1 vs. uniprot
Match: D7G1D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D8_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.310e-34
Identity = 85/145 (58.62%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    1 MGEGVRVQEGESEEDFYGADLGGVTMSPGWRTIERDRGRTESASNGVPPTGDGGPTITSEELRKLTIEHAADNHHENRLNAAYGSGFFGGGLM-----GAP---GIAATMQARSRLVDDLLRSGRVQLAGVPISREASALRRLHQ 137
            +G+GVRV+EG +EE FYG   G V          RD  RTE AS          PTITSEELRKLTIEHA DNHH +  +A  GSGFFGGGL      GA    G  A+ QARSR VDDLLRSGRVQ AGVP+SREA+AL RLHQ
Sbjct:  125 IGDGVRVREGGTEEAFYGEAFG-VGRRRRRGGAPRDGIRTERASRTTNRDQGDEPTITSEELRKLTIEHAGDNHHVDPWDAGAGSGFFGGGLXXXXXKGARRFGGAEASSQARSRRVDDLLRSGRVQFAGVPVSREAAALLRLHQ 268          
BLAST of mRNA_H-elongata_contig84576.16064.1 vs. uniprot
Match: A0A6H5JN32_9PHAE (DUF4460 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN32_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.400e-34
Identity = 82/145 (56.55%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    1 MGEGVRVQEGESEEDFYGADLGGVTMSPGWRTIERDRGRTESASNGVPPTGDGGPTITSEELRKLTIEHAADNHHENRLNAAYGSGFFGGGLMGAPG--------IAATMQARSRLVDDLLRSGRVQLAGVPISREASALRRLHQ 137
            MG+GVRV+EGE+EE FYG   G V          RD  RTE AS          PT+TSEELR+LTIEHA DNHH +  +A  GSGFFGGGL    G          A  QARSR VDDLLRSGRVQ AGVP+SREA+AL RLH+
Sbjct:  189 MGDGVRVREGETEEAFYGEAFG-VGRRRRRGGPPRDGIRTERASRTTDRDQGDAPTMTSEELRELTIEHAGDNHHVDPWDAGAGSGFFGGGLGXXXGRGVRRFGGAEAASQARSRRVDDLLRSGRVQFAGVPVSREAAALLRLHR 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84576.16064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4A3_ECTSI2.700e-3655.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1D8_ECTSI1.310e-3458.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN32_9PHAE8.400e-3456.55DUF4460 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84576contigH-elongata_contig84576:1648..2772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84576.16064.1mRNA_H-elongata_contig84576.16064.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84576 1642..2772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84576.16064.1 ID=prot_H-elongata_contig84576.16064.1|Name=mRNA_H-elongata_contig84576.16064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
MGEGVRVQEGESEEDFYGADLGGVTMSPGWRTIERDRGRTESASNGVPPT
GDGGPTITSEELRKLTIEHAADNHHENRLNAAYGSGFFGGGLMGAPGIAA
TMQARSRLVDDLLRSGRVQLAGVPISREASALRRLHQ
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