prot_H-elongata_contig84511.16062.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig84511.16062.1
Unique Name	prot_H-elongata_contig84511.16062.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	128

Homology

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A6H5L258_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L258_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 6.680e-67
Identity = 119/124 (95.97%), Postives = 122/124 (98.39%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASS 124
            +VLVCAPSNVAVDHLTAKI ATGLRVVRLCAKSREAVSTDVDHLSLH MVRA+DTP+KQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASS
Sbjct:  560 QVLVCAPSNVAVDHLTAKISATGLRVVRLCAKSREAVSTDVDHLSLHVMVRALDTPDKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASS 683

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: D7FN00_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN00_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 3.070e-65
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLVCAPSNVAVDHLTAKI ATGLRVVRLCAKSREAVSTDVDHLSLH MVRA+DTP+KQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQ   + A
Sbjct:  549 QVLVCAPSNVAVDHLTAKISATGLRVVRLCAKSREAVSTDVDHLSLHVMVRALDTPDKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEA 675

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A7C8YEN4_OPUST (RNA helicase n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YEN4_OPUST)

HSP 1 Score: 157 bits (397), Expect = 4.170e-47
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQ 121
            +VLVCAPSNVAVD L  KI ATG++VVRLCAKSREAVS+ V+HL+LH  VR +DT EK +L KLQ LKDE GEL ++DEK+++ L+ + EREI Q+ADVIC TCVGAGDPRL+N   RFRQ
Sbjct:   20 QVLVCAPSNVAVDQLAEKISATGMKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKSLKRATEREIAQSADVICCTCVGAGDPRLAN--FRFRQ 138

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A8K1FJJ0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJJ0_PYTOL)

HSP 1 Score: 170 bits (431), Expect = 1.250e-46
Identity = 90/127 (70.87%), Postives = 106/127 (83.46%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLTAKI ATGL+VVRL AKSREAV++ V+HLSLH MV+++D+P+K DLRKL  LKD+ GEL + DEKRF+ L+  AEREILQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  506 QVLVTAPSNIAVDHLTAKISATGLKVVRLAAKSREAVASSVEHLSLHAMVKSLDSPDKADLRKLMQLKDDQGELSSQDEKRFKALKRQAEREILQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 630

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: H3G5R3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5R3_PHYRM)

HSP 1 Score: 169 bits (428), Expect = 2.200e-46
Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLT KI ATGLRVVRL AKSREAV++ V+HLSLH M++++D+P+K DLRKL  LKD+ GEL + DEKRF+ L+  AEREILQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  427 QVLVTAPSNIAVDHLTMKISATGLRVVRLAAKSREAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDQGELSSQDEKRFKSLKRQAEREILQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 551

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A662XNM8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNM8_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.340e-46
Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLT KI ATGLRVVRL AKSREAV++ V+HLSLH M++++D+P+K DLRKL  LKD+ GEL + DEKRF+ L+  AEREILQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  525 QVLVTAPSNIAVDHLTTKISATGLRVVRLAAKSREAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDQGELSSQDEKRFKALKRQAEREILQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 649

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A3R7KMF1_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A3R7KMF1_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.230e-46
Identity = 89/127 (70.08%), Postives = 105/127 (82.68%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLT KI ATGLRVVRL AKSREAV++ V+HLSLH M++++D+P+K DLRKL  LKD+ GEL + DEKRF+ L+  AEREILQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  606 QVLVTAPSNIAVDHLTMKISATGLRVVRLAAKSREAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDQGELSSQDEKRFKSLKRQAEREILQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 730

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: K3X0E4_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0E4_GLOUD)

HSP 1 Score: 169 bits (427), Expect = 4.370e-46
Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLTAKI ATGL+VVRL AKSREAV++ V+HLSLH M++++D+P+K DLRKL  LKD+ GEL + DEKRF+ L+  AERE+LQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  543 QVLVTAPSNIAVDHLTAKISATGLKVVRLAAKSREAVASSVEHLSLHAMIKSLDSPDKADLRKLTQLKDDQGELSSQDEKRFKALKRQAERELLQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 667

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A4D8Y1Y1_SALSN (Regulator of nonsense transcripts 1 n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y1Y1_SALSN)

HSP 1 Score: 158 bits (399), Expect = 6.180e-46
Identity = 83/121 (68.60%), Postives = 99/121 (81.82%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQ 121
            +VLVCAPSNVAVD L  KI ATGL+VVRLCAKSREAVS+ V+HL+LH  VR +DT EK +L KLQ LKDE GEL ++DEK+++ L+ + EREI Q+ADVIC TCVGAGDPRL+N   RFRQ
Sbjct:   96 RVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN--FRFRQ 214

[Close]

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Match: A0A418E558_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E558_9STRA)

HSP 1 Score: 160 bits (404), Expect = 7.030e-46
Identity = 84/127 (66.14%), Postives = 105/127 (82.68%), Query Frame = 0

Query:    1 KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMVRAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQASSEAA 127
            +VLV APSN+AVDHLT KI +TGL+VVRL AKSREAV++ V+HL+LH M++++ +P+K DLRKL  LK++ GEL + DEKRF+ L+ +AEREILQAADVICTTCVGAGDPRLSN   RFRQ   + A
Sbjct:  103 QVLVTAPSNIAVDHLTEKIASTGLKVVRLAAKSREAVTSIVEHLTLHTMIKSLVSPDKADLRKLMQLKEDQGELSSQDEKRFKSLKRNAEREILQAADVICTTCVGAGDPRLSN--FRFRQVLIDEA 227

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot

BLAST of mRNA_H-elongata_contig84511.16062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L258_9PHAE	6.680e-67	95.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FN00_ECTSI	3.070e-65	92.13	RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]
A0A7C8YEN4_OPUST	4.170e-47	67.77	RNA helicase n=3 Tax=Opuntia streptacantha TaxID=3...	[more]
A0A8K1FJJ0_PYTOL	1.250e-46	70.87	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
H3G5R3_PHYRM	2.200e-46	70.08	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A662XNM8_9STRA	2.340e-46	70.08	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]
A0A3R7KMF1_9STRA	3.230e-46	70.08	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
K3X0E4_GLOUD	4.370e-46	69.29	AAA domain-containing protein n=1 Tax=Globisporang...	[more]
A0A4D8Y1Y1_SALSN	6.180e-46	68.60	Regulator of nonsense transcripts 1 n=1 Tax=Salvia...	[more]
A0A418E558_9STRA	7.030e-46	66.14	Uncharacterized protein (Fragment) n=2 Tax=Aphanom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041677	DNA2/NAM7 helicase, AAA domain	PFAM	PF13086	AAA_11	coord: 1..60 e-value: 2.1E-8 score: 34.3
None	No IPR available	GENE3D	3.40.50.300		coord: 1..122 e-value: 1.6E-17 score: 65.6
None	No IPR available	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 1..121
None	No IPR available	PANTHER	PTHR10887:SF451		coord: 1..121
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig84511	contig	H-elongata_contig84511:1000..2315 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig84511.16062.1	mRNA_H-elongata_contig84511.16062.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig84511 1000..2315 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig84511.16062.1 ID=prot_H-elongata_contig84511.16062.1|Name=mRNA_H-elongata_contig84511.16062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
KVLVCAPSNVAVDHLTAKICATGLRVVRLCAKSREAVSTDVDHLSLHCMV
RAMDTPEKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVI
CTTCVGAGDPRLSNVNLRFRQASSEAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041677	DNA2/NAM7_AAA_11
IPR027417	P-loop_NTPase