mRNA_H-elongata_contig84505.16061.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: D7FJH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH4_ECTSI) HSP 1 Score: 135 bits (341), Expect = 7.180e-37 Identity = 67/114 (58.77%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
SL+W K+VQRAYDKRH GQP+KVQLND FALHA +S T+ QVVYYDW+ R+QRPSSAAV + I++ YAL+V + RGNG + +LNWLDFLYFLSY+K
Sbjct: 67 SLYWSKSVQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYALSVWAGRTTRGNG------SDRGLLNWLDFLYFLSYVK 174
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A6H5L0H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H5_9PHAE) HSP 1 Score: 132 bits (332), Expect = 5.340e-35 Identity = 66/114 (57.89%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
SL W K +QRAYDKRH GQP+KVQLND FALHA +S T+ QVVYYDW+ R+QRPSSAAV + I++ YA++V Q RGNG + +LNWLDFLYFLSY+K
Sbjct: 127 SLHWSKFMQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYAVSVWAGQTTRGNG------SDRGLLNWLDFLYFLSYVK 234
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A1Y1YJ26_9FUNG (Cystinosin n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YJ26_9FUNG) HSP 1 Score: 75.5 bits (184), Expect = 4.200e-14 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
S +W ++Q Y +R+ G + V +NDVFF +HA VI+LVTIVQV +Y ++ Q+PS +VI G I V YA+ + +T W+D LY+LSY+K
Sbjct: 60 SFYWNHSIQEEYRQRNNGHSNLVAVNDVFFGMHAIVITLVTIVQVFFYK-RSPEQKPSWFGIVIVVGSILGAVGYAIYIGVTGSF-----------------WIDLLYYLSYVK 155
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A1E7EIT9_9STRA (PQ-loop-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIT9_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.210e-12 Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPS-KVQLNDVFFALHAAVISLVTIVQVVYYD-----WQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
S FW ++ Y +R+ VQ NDV FA+HA ++S +T+ Q+ YY W + +P+ + I I+ C +Y L V IT RG D D I NWLD+LY LS++K
Sbjct: 108 SFFWSATIKEYYKQRYGPDAEITVQSNDVAFAIHALILSSITLCQIAYYGDEPGIWSIKLSKPT---IFIIVSILGVCAMYPLLV-ITH--RGRDNVDYEDDAIGRFNWLDYLYILSFVK 221
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A7S4REA9_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4REA9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.940e-12 Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHE-GQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
SLFW +Q Y + H G+ V+ NDV FALHA V+S +T+ Q+ YYD Q S +V +FFG+ +V++ V I L+WL FLY LSY+K
Sbjct: 198 SLFWSPYIQNLYRQNHAAGESIPVRSNDVAFALHAFVLSSITLGQIWYYDGFGTSQTKMSFSVKLFFGVAFLVLVFSTLVAIVS---------------SKLSWLGFLYILSYVK 297
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: UPI001C9AD022 (cystinosin homolog isoform X1 n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9AD022) HSP 1 Score: 70.1 bits (170), Expect = 9.570e-12 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 1
Query: 4 LFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
LFW+ V+ Y +RH + VQ+ND+FFALHA +++TI Q Y+ +R ++ + F II C + AV I L+WLDFLY+ SY+K
Sbjct: 176 LFWISDVEIEYFRRHPKGLNPVQVNDIFFALHAVTATVITIFQCFIYETGTQRVSTTARIIHGIFAIIVLCTIILAAVHI-------------------LHWLDFLYYCSYIK 269
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A1Y1YNB3_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YNB3_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 2.270e-11 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAV--VIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
+ +W +++ Y R++G + VQ+NDVFF LHA ++SLVT+ Q++YY Q + AV VI GI+ C + G G+W +D LYFLSY+K
Sbjct: 59 AFYWSSEIRKEYRDRNDGHDNLVQVNDVFFGLHALLVSLVTLGQILYYKQQPSKLLKLFTAVTLVIASGILLC------------ITSGWGMW------------IDLLYFLSYVK 150
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A7S4DB46_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB46_HETAK) HSP 1 Score: 68.2 bits (165), Expect = 4.080e-11 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 1
Query: 4 LFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVV-YALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
+++ A+Q Y K H+G +KV LNDV FA+HA +I+++TI+Q+ YYD R Q +S + GI C+ YA GV + R L WL +LYFLSY+K
Sbjct: 141 FYFVPAIQDEYRKTHDGNDNKVALNDVCFAVHALIITVITIMQMRYYD---RYQTRASWVGCLLLGIGFLCIAGYA-----------GGVLLLRRR----LTWLGWLYFLSYVK 236
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A8J5DIR2_9DIPT (Uncharacterized protein n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5DIR2_9DIPT) HSP 1 Score: 67.0 bits (162), Expect = 9.600e-11 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 4 LFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCCVVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
LFW K +Q Y R + V +NDV FALHA V +LVTIVQ +Y+ +QR S+ A +I G+ CV+ + ++ G V ++WLDFLY+ SY+K
Sbjct: 180 LFWNKFIQAEYFVRFPQGLNPVLINDVVFALHAMVATLVTIVQCYFYE--RAQQRVSNIARIIL-GVFGICVI------VFAILGGTAV----------IHWLDFLYYCSYIK 273
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Match: A0A2R5GBC7_9STRA (Cystinosin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBC7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.010e-10 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 1 SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWQARRQRPSSAAVVIFFGIISCC-VVYALAVEITQLVRGNGVWDVSRDEIPVLNWLDFLYFLSYMK 342
+ F V+ +Y + H+G+ + V+ NDVFFALHA V++ T+ Q+ Y ++ + R V F G+ S VVY LAV L GN +W+ + L +LYF+SY+K
Sbjct: 97 AFFSSSTVRESYRRAHDGEENLVRANDVFFALHATVVTGATLWQMYYCGYRRPKGRLVRPVVFAFIGLTSALTVVYLLAV----LGHGNPMWEQGSNS-NFWTMLSWLYFVSYIK 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84505.16061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84505.16061.1 >prot_H-elongata_contig84505.16061.1 ID=prot_H-elongata_contig84505.16061.1|Name=mRNA_H-elongata_contig84505.16061.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp SLFWLKAVQRAYDKRHEGQPSKVQLNDVFFALHAAVISLVTIVQVVYYDWback to top mRNA from alignment at H-elongata_contig84505:469..2617+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84505.16061.1 ID=mRNA_H-elongata_contig84505.16061.1|Name=mRNA_H-elongata_contig84505.16061.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2149bp|location=Sequence derived from alignment at H-elongata_contig84505:469..2617+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84505:469..2617+ >mRNA_H-elongata_contig84505.16061.1 ID=mRNA_H-elongata_contig84505.16061.1|Name=mRNA_H-elongata_contig84505.16061.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig84505:469..2617+ (Himanthalia elongata Himel1 dioecious)back to top |