mRNA_H-elongata_contig84470.16059.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: D7G8Z6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z6_ECTSI) HSP 1 Score: 233 bits (595), Expect = 2.180e-71 Identity = 112/146 (76.71%), Postives = 130/146 (89.04%), Query Frame = 1
Query: 1 ADELAKTMRSPWETPPAVTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYLRFQQ 438
A+ LAKTMRSPW TPPA+TVDLEPLR MR+L+IQWPMPPV+ LWR SPT VLSHL+GHEGPGSL+AALQDQGLA S+S+G+RTAHEDFSLFQV V LT+EG+ RW +VAALVHAHA LVR++P +DA R W+E+RDM AIYLRFQQ
Sbjct: 55 AEALAKTMRSPWATPPAMTVDLEPLRGMRQLIIQWPMPPVRDLWRNSPTMVLSHLLGHEGPGSLYAALQDQGLANSLSSGMRTAHEDFSLFQVIVHLTKEGQARWKEVAALVHAHAGLVRKLPPEDASRAWQESRDMRAIYLRFQQ 200
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A6H5KRX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX7_9PHAE) HSP 1 Score: 233 bits (594), Expect = 2.200e-68 Identity = 112/146 (76.71%), Postives = 129/146 (88.36%), Query Frame = 1
Query: 1 ADELAKTMRSPWETPPAVTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYLRFQQ 438
A+ LAKTMRSPW TPPA+TVDLEPLR MR+L+IQWPMPPV+ LWR SPT VLSHL+GHEGPGSL+AALQDQGLA S+S+G+RTAHEDFSLFQV V LT EG+ RW +VAALVHAHA LVR++P +DA R W+E+RDM AIYLRFQQ
Sbjct: 346 AEALAKTMRSPWATPPAMTVDLEPLRGMRQLIIQWPMPPVRDLWRNSPTMVLSHLLGHEGPGSLYAALQDQGLANSLSSGMRTAHEDFSLFQVIVHLTREGQARWKEVAALVHAHAGLVRKLPPEDASRAWQESRDMRAIYLRFQQ 491
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A836CLR7_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR7_9STRA) HSP 1 Score: 152 bits (385), Expect = 4.430e-40 Identity = 71/138 (51.45%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 19 TMRSPWETPPAVTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYLRF 432
TM SP++ P + V++EPLR R++ +QWP+PP + LWR+SPTR+LSH+ G E PGSLF+ LQD+GLA SV+AG+RT+++DFSLFQV V LT++GE R +V +L+H ++RLVR + + A ++W E + M + RF
Sbjct: 544 TMNSPFKATPLM-VEVEPLRGQRKIFVQWPLPPQRRLWRESPTRLLSHIWGSESPGSLFSVLQDRGLANSVAAGVRTSYDDFSLFQVTVALTQDGEARADEVLSLIHQYSRLVRSMTDEQAAQLWSEVKAMGDLDFRF 680
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A1Z5KBP4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBP4_FISSO) HSP 1 Score: 126 bits (317), Expect = 6.220e-31 Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 1 ADELAKTMRSPWETPPA-----VTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRD-------------DAQRVWKEARDMSAIYL 426
AD A RSP+ + + + +P+R +RRL++ +P+P V LL +SP VLSHL+GHEGP S FA LQD GL +S+SAG RT+ DF+LFQVD+GLTE GEK W V ++ H RL+ E D QR+W E+ + A++
Sbjct: 279 ADSSATVFRSPFRSDVQGGQWPIMITTKPVRPVRRLVMMFPLPSVHLLSDRSPVSVLSHLLGHEGPNSPFAVLQDAGLLSSLSAGPRTSGPDFTLFQVDMGLTENGEKNWRQVVDVIIQHCRLIHEATTRLPTCGGDAEGTVFDVQRIWAESTKLRALFF 438
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A1E7EVI0_9STRA (Peptidase_M16-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVI0_9STRA) HSP 1 Score: 126 bits (317), Expect = 6.240e-31 Identity = 58/125 (46.40%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 52 VTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYL 426
V + +PLR MR+L++ +P+P + ++P+ +LSHL+GHEGPGS FA LQ++GL +S+SAG RT+ DF++FQVD+GLTE+GE++W DV + A+ RL++ DD +R+WKE ++ I+
Sbjct: 316 VLLTTKPLRSMRKLVLMFPIPSDRKTPDRAPSSMLSHLLGHEGPGSAFATLQNKGLLSSLSAGPRTSGPDFTIFQVDMGLTEKGEEQWKDVVHTIFAYCRLLKGSGDDDLKRIWKEMSELDKIFF 440
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A1Z5JM00_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JM00_FISSO) HSP 1 Score: 124 bits (310), Expect = 5.450e-30 Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1
Query: 1 ADELAKTMRSPWETPPA-----VTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIY 423
AD A RSP+ + + +P+R +RRL++ +P+P V +L +SP VLSHL+GHEGP S FA LQD GL +S+SAG RT+ DF+LFQVD+GLTE+GE W V ++ H RL+ E +A+RV +D IY
Sbjct: 279 ADSSASVFRSPFRPDVQGGQWPILITTKPVRPVRRLVMMFPLPSVHILSDRSPVSVLSHLLGHEGPNSPFAVLQDAGLLSSLSAGQRTSGPDFTLFQVDMGLTEKGEANWKQVVDVIFQHCRLISE----EAKRVSTPGKDSGTIY 420
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A7S4VKR3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VKR3_9DINO) HSP 1 Score: 123 bits (309), Expect = 7.160e-30 Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 58 VDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYLRFQQ 438
V++ PLRE+R L ++W MP ++ R + ++ SHL+GHEG GS+FA LQD G ATS+SAG ++F+LF V V LT EGEK WH V LV + RL+R + D QR W E R ++AI RFQQ
Sbjct: 101 VEVAPLRELRALQLKWAMPSMRSRCRTNALQLFSHLLGHEGEGSIFARLQDNGWATSLSAGSGHEDDNFTLFTVKVTLTPEGEKNWHQVLRLVMDYCRLLRAMQPADIQRYWAEVRAIAAIRFRFQQ 227
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: K8YXD5_NANGC (Insulysin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXD5_NANGC) HSP 1 Score: 119 bits (299), Expect = 1.610e-28 Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 37 ETPPAVTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAIYLRFQQAS 444
+ P + + PLR+ + + + WP+PP + +R PTR+LSHL+GHEG GS+F+ L G A+ V AGL T+ +DF LF+V V LTEEG W DVA+L+ + L+ ++ +W E R +SA RFQQ S
Sbjct: 159 QCPAVPLIRIVPLRDKKEIRVTWPLPPSRPAYRAPPTRLLSHLLGHEGEGSIFSVLHRAGWASGVHAGLGTSQDDFCLFEVTVALTEEGLPHWQDVASLIFQYVHLIGRASPEELLVLWDELRVISATAFRFQQKS 294
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A7S2S1E0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1E0_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.450e-28 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 73 LREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLVREIPRDDAQRVWKEARDMSAI 420
L+E+R L + W +PP + LW PT +LSHL+GHEGPGS+FAALQD+G T++SAG R ED + FQV LTEEGE W ++ LV+ + R++ + QR W+E R M +
Sbjct: 3 LKELRILQLLWEIPPTKDLWPAPPTALLSHLLGHEGPGSIFAALQDRGWVTALSAGERIGQEDVAAFQVRAALTEEGEAHWQEIGHLVYGYLRVLAAASDGELQRHWEEIRTMCKV 118
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Match: A0A7S2YC00_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC00_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.720e-26 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 52 VTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGHEGPGSLFAALQDQGLATSVSAGLRTAHEDFSLFQVDVGLTEEGEKRWHDVAALVHAHARLV-------REIPRDDAQRVWKEARDMSAIYL 426
V + ++P+R MRRL++ +P+P V+ + +SPT VLSHL+GHEGP S FA LQ++GL TS+SAG R FSLFQVD+ LTE+GEKRW DV ++ + R + + + R+W+E ++ I+
Sbjct: 286 VLLTVKPVRSMRRLVLMFPLPSVRKIPDQSPTAVLSHLLGHEGPKSPFALLQNEGLITSLSAGNRFGEPTFSLFQVDISLTEKGEKRWKDVVDVILQYCRFLHLEGLAAKNGKSSELSRIWEEKIALNRIFF 417 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84470.16059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84470.16059.1 >prot_H-elongata_contig84470.16059.1 ID=prot_H-elongata_contig84470.16059.1|Name=mRNA_H-elongata_contig84470.16059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp MRSPWETPPAVTVDLEPLREMRRLMIQWPMPPVQLLWRKSPTRVLSHLMGback to top mRNA from alignment at H-elongata_contig84470:809..2616+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84470.16059.1 ID=mRNA_H-elongata_contig84470.16059.1|Name=mRNA_H-elongata_contig84470.16059.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1808bp|location=Sequence derived from alignment at H-elongata_contig84470:809..2616+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84470:809..2616+ >mRNA_H-elongata_contig84470.16059.1 ID=mRNA_H-elongata_contig84470.16059.1|Name=mRNA_H-elongata_contig84470.16059.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig84470:809..2616+ (Himanthalia elongata Himel1 dioecious)back to top |