mRNA_H-elongata_contig8446.16058.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: D7FJR7_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR7_ECTSI) HSP 1 Score: 248 bits (634), Expect = 2.200e-78 Identity = 124/198 (62.63%), Postives = 148/198 (74.75%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDEIGTAS-DSEKHTQVEEIGR--RPPP 587
V+H+WSP G +RF+DLVKDDYFTDVALFRCV+ FL QFGISP S K +W+ +GPIKDDP L I F RG LSFAG+G NSR TQ+FITF ++ LG+ +PWETPLGIVT GM+TV+D Y GYGDQ PFN+ GINQ TLQ+RGNAYLREEFP ISY K+CRVV E +E +A + ++ E G RPPP
Sbjct: 37 VYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLGK--TPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVVGETVPEEHASARVEKQQEKPGGEYGDVLRPPP 232
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S3MFS0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFS0_9STRA) HSP 1 Score: 177 bits (450), Expect = 9.130e-52 Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDEIGTASDSEKHTQV 560
++ WSP+G +RFLDLVKDD+FTD+A FRCVR FL QFGIS P +W H+ I DDP L + + LSFAG G N+R+TQLFI F++L LG+ PWETP G V G +T +D+LY YGD PF K G +Q + NRGNAY+RE+FP + + K C +V +E + SE H V
Sbjct: 36 IYKEWSPLGAERFLDLVKDDFFTDIAFFRCVRRFLTQFGISDVPSKK---HW-HREEIPDDPNLNLGIKKNYLSFAGGGPNTRSTQLFIAFEDLDFLGK--EPWETPFGQVIEGQQT-LDSLYKDYGDIPPFGK-GPDQQKIHNRGNAYVREKFPKVDFIKSCHMVEPPKVEEKPIVAQSEVHEPV 213
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S1R7D7_ALECA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA) HSP 1 Score: 162 bits (411), Expect = 3.500e-46 Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQD 518
V+ WSP G + FLDLVK ++TD+ALFR V FL QFGIS D S T I+DDP+LG+PF RGTLS+AG G NSRT Q+FI+F + + LG+ SPWETP G V+ ++ +Y GYGD P+ K G + + +Q GN Y+R+EFP I + + C+VV D
Sbjct: 30 VYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGISTD---SAMTQKYGSQTIEDDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLGK--SPWETPFGHVSKHSMDILSQIYTGYGDMPPWGK-GPSPSLIQQHGNKYVRDEFPKIDFIRSCKVVDASSHD 195
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S1T0Y9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO) HSP 1 Score: 159 bits (403), Expect = 1.110e-43 Identity = 81/182 (44.51%), Postives = 114/182 (62.64%), Query Frame = 3
Query: 15 WSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQ-----DEIGTASDSE 545
W+P+G RFL+LV+ +F DVALFR V FL QFGI+ DPE +K W+ +G I DDP++G P RGT++FAG+G+NSRTTQ++I F++ LG+ WETP VT GM+ V+D Y GYGD F + + GN+Y+++EFP + Y CRV+ + D+ GT +E
Sbjct: 48 WAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGIAADPEVTKK--WQSKGNIMDDPSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLGKAF--WETPFAQVTEGMD-VVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVKKEFPQMDYITSCRVLGQEAMVVAAADQAGTVQQAE 224
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A6B2LG42_9EUKA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG42_9EUKA) HSP 1 Score: 148 bits (374), Expect = 3.960e-40 Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSE 506
V+ W+P+G RFL+LV+D+YFT FR V+GFL QFGI DP K W +GPI DDP G+ F RG LSFAG GE+SRTT+LF+ + + G ++ WE P G+V M+ V D + YGD P+ + G +Q L RGNAYL E FP + Y C + SE
Sbjct: 15 VYPDWAPIGSDRFLELVRDNYFTKSPFFRVVKGFLVQFGIPADPSKWKE--WHDKGPINDDPPKGVSFKRGYLSFAGYGEDSRTTELFVAYSDENGFG--NTRWEVPFGVVQ-DMD-VFDQINDEYGDVPPYGQ-GPDQQQLYLRGNAYLTENFPKMDYISYCSIESE 175
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S0CX23_9EUKA (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CX23_9EUKA) HSP 1 Score: 143 bits (361), Expect = 2.320e-38 Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 3
Query: 12 AWSPVGVQRFLDLVKDDYFTD-VALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTA-GMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRV 497
AWSP G RF DLV++ YF D V +FR V+GFL QFGIS + S+N W+ + PI DD + F RG +SFAG+G NSRTTQ FI +++ LG ++PWETP G ++ ME V+DN Y YGD F K +Q + G Y+++EFP + Y CRV
Sbjct: 51 AWSPRGADRFKDLVEEGYFDDGVGMFRVVKGFLVQFGISNNV--SRNAAWEVKSPIPDDTRVLSTFKRGYVSFAGSGPNSRTTQTFICYQDNNHLG--NAPWETPFGWISGYDMEKVVDNFYSEYGDIPHFGGKCPDQGRYSHEGGEYVKKEFPNLDYITSCRV 210
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A2R5GIZ6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIZ6_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.560e-37 Identity = 73/162 (45.06%), Postives = 97/162 (59.88%), Query Frame = 3
Query: 12 AWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTA-GMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCR 494
+W+PVG +RFL+LV + +F LFR VRGFL QFG+S DPE+ N W H + DDP G+ RGTL+FAG+G+NSR TQ+FI + S PWETP V A + V+ L YGD PFNK+G++ + G +YL + FP + Y CR
Sbjct: 33 SWAPVGAERFLNLVDEGFFDGAPLFRAVRGFLVQFGLSSDPEA--NNRWGHLT-LPDDPKQGVRIRRGTLAFAGSGKNSRATQMFIALTDKAWPRLGSEPWETPFAYVPAEDYQAVVSLLNTEYGDIKPFNKQGVDPGKIWRHGMSYLEDGFPNLDYLAYCR 191
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A835YQT8_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT8_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.300e-37 Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 3
Query: 9 HAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGP-IKDD-PTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVV 500
H W+P+G RF+ ++ TD+ALFR + F+ Q G+ W P DD P +PF G +SFAG G++SR T FI + + + LG SPWETP G+V GM V+ Y GYG+ PFN G+NQ+ + GNAYLR EFP + Y K C +V
Sbjct: 48 HEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLG--GSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIV 211
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S0J996_9EUKA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J996_9EUKA) HSP 1 Score: 132 bits (331), Expect = 9.690e-34 Identity = 71/167 (42.51%), Postives = 104/167 (62.28%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNA--YLREEFPLISYFKKCRV 497
++ W+P+GV+R + L +D +F+++ FR + FL QFGI D ++K +W+HQG IKDDP+ GIPF G +SFAG ++SR+T LFIT E + LG S PWE +G V G++ V+ +Y GYGDQ + Q LQ R +A Y+ + FP + F+ C V
Sbjct: 40 LYPEWAPLGVERAIALAEDGFFSNLPFFRAIPHFLIQFGIQLD--AAKQRHWQHQGNIKDDPSQGIPFTEGVVSFAGYSKDSRSTHLFITLGEQRGLG--SRPWEVAIGKVVRGID-VVHGIYTGYGDQ-------VQQGRLQ-RSDAVQYVADNFPKLDKFEACEV 193
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S4JKR9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JKR9_9EUKA) HSP 1 Score: 132 bits (333), Expect = 2.480e-33 Identity = 76/182 (41.76%), Postives = 109/182 (59.89%), Query Frame = 3
Query: 3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVR-----GFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYG----DQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDE 521
V+ WSP+G +RF++LVKD Y+ +FR + G+L QFGIS + + + W I DDP+LG F RG +SFAGNG NSRTTQ+FI + + + G ++PWETP G V GM + D Y G G D PF + G + + ++ +G YLR+ FP ++Y ++C VVSE + E
Sbjct: 75 VYSNWSPLGAKRFVELVKDGYYDQSPIFRVAKRGRNWGYLTQFGISLNKDLEEK--WG-SSTIPDDPSLGFSFDRGDISFAGNGPNSRTTQVFIPYGDTTSRGLGNAPWETPFGKVVVGMN-IADEFYDGDGKISLDIPPFGQ-GPDPHKIKTQGRPYLRKNFPELTYIEEC-VVSEDFTHE 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8446.16058.1 >prot_H-elongata_contig8446.16058.1 ID=prot_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp METVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRback to top mRNA from alignment at H-elongata_contig8446:4868..7025- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8446.16058.1 ID=mRNA_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2158bp|location=Sequence derived from alignment at H-elongata_contig8446:4868..7025- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8446:4868..7025- >mRNA_H-elongata_contig8446.16058.1 ID=mRNA_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig8446:4868..7025- (Himanthalia elongata Himel1 dioecious)back to top |