prot_H-elongata_contig84398.16053.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84398.16053.1
Unique Nameprot_H-elongata_contig84398.16053.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig84398.16053.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 5.950e-12
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 DPVFRVRKATALNLHKICRIAGEAGIQRLLPAYVRLT 37
            DPVFRVRKATALNL KIC++ GEAGI RLLPAY+RLT
Sbjct:  194 DPVFRVRKATALNLDKICKVVGEAGIARLLPAYLRLT 230          
BLAST of mRNA_H-elongata_contig84398.16053.1 vs. uniprot
Match: A0A6H5JCV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV5_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 9.930e-12
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 DPVFRVRKATALNLHKICRIAGEAGIQRLLPAYVRL 36
            DPVFRVRKATALNL KIC++ GEAGI RLLPAYVRL
Sbjct:  194 DPVFRVRKATALNLDKICKVVGEAGIARLLPAYVRL 229          
BLAST of mRNA_H-elongata_contig84398.16053.1 vs. uniprot
Match: A0A836CCL0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.640e-7
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 DPVFRVRKATALNLHKICRIAGEAGIQ-RLLPAY 33
            DPVFRVRKATALNLH +CR+ G A  + RLLPAY
Sbjct:   26 DPVFRVRKATALNLHNVCRVVGAADSRDRLLPAY 59          
BLAST of mRNA_H-elongata_contig84398.16053.1 vs. uniprot
Match: A0A2R5GM29_9STRA (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM29_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.650e-7
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 DPVFRVRKATALNLHKICRIAGEAGIQRLLPAYVRLTKDDVYRVRKS 47
            DP F+VRKA AL++ KI R+A    + RLLPAY RL+KD ++ VRK+
Sbjct:  222 DPSFKVRKAVALSMDKIMRVAHTCSV-RLLPAYERLSKDSIWGVRKA 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84398.16053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTC4_ECTSI5.950e-1283.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV5_9PHAE9.930e-1286.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCL0_9STRA8.640e-773.53Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A2R5GM29_9STRA8.650e-755.32Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..55
e-value: 2.7E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84398contigH-elongata_contig84398:2030..2203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84398.16053.1mRNA_H-elongata_contig84398.16053.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84398 2030..2203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84398.16053.1 ID=prot_H-elongata_contig84398.16053.1|Name=mRNA_H-elongata_contig84398.16053.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
DPVFRVRKATALNLHKICRIAGEAGIQRLLPAYVRLTKDDVYRVRKSVNI
EEAVTNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like