mRNA_H-elongata_contig84371.16051.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI) HSP 1 Score: 270 bits (689), Expect = 6.230e-84 Identity = 129/144 (89.58%), Postives = 134/144 (93.06%), Query Frame = 1
Query: 757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 1188
RLQQELM IMM ADPGASAFPNDDNLFEWTATL G +DTAY+GLTYKLKLVFP+TYPYK PLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAA LWADQ+KYRQVC QKYQE EA
Sbjct: 11 RLQQELMGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQKYQEGAGEA 154
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A9T770_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T770_PHYPA) HSP 1 Score: 198 bits (503), Expect = 3.510e-56 Identity = 88/150 (58.67%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSEA 1188
S+ + RLQ ELMS+MMS DPG SAFP DN+F W T+KG + T Y+GL+YKL L FP YP+KPP++ F+T CFHPNVD+ GNICLDIL++KWSSA+ V T+L S++SLL +PNNDSPLN+ AA LW+DQE+Y++V ++Y++ + A
Sbjct: 34 SHSVSRRLQSELMSLMMSGDPGISAFPEGDNIFSWIGTIKGSNGTVYEGLSYKLTLKFPTDYPFKPPVVKFDTLCFHPNVDQFGNICLDILQDKWSSAYDVRTVLLSIQSLLGEPNNDSPLNSYAAALWSDQEEYKKVMRKQYRDAAALA 183
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: C3YEG7_BRAFL (UBC core domain-containing protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YEG7_BRAFL) HSP 1 Score: 197 bits (502), Expect = 4.450e-56 Identity = 90/147 (61.22%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
+ + RLQQELM +MMS D G SAFP+ D+LF WT TL G T Y+GL YKL L FP+ YPYKPP + FETPCFHPNVDEHGNICLDILKEKWS+ + V T+L S++SLL +PNNDSPLN AA LW +Q +Y++ L++Y++ V
Sbjct: 29 KHTVSRRLQQELMGLMMSDDKGISAFPSGDSLFNWTGTLTGPLGTVYEGLQYKLSLEFPQGYPYKPPTVRFETPCFHPNVDEHGNICLDILKEKWSALYDVRTVLLSIQSLLGEPNNDSPLNVHAAGLWENQTEYKKTLLERYEKDV 175
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO) HSP 1 Score: 197 bits (501), Expect = 4.960e-56 Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
S+ RLQ ELMS+M + DPG SAFP+ D+LF W T++G DT Y+G++YKL L FP YP+K P + FETPCFHPN+D++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN+ AA LW QE Y++V ++KY E
Sbjct: 27 SHAVTKRLQSELMSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAE 171
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A8J4ZIV0_9CHEL (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZIV0_9CHEL) HSP 1 Score: 197 bits (500), Expect = 8.130e-56 Identity = 86/151 (56.95%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 727 P*HCSYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
P ++ + RLQ+ELM++MMS D G SAFP+ DNLF+W T+KG D+T Y+GL+YKL L FP YPY+PP++ F+TPCFHPNVD+ GNICLDILKEKWS+ + V ++L S++SLL +PNN SPLN +AA LW++Q+ YR+V +KY +
Sbjct: 26 PKQENHSVSKRLQKELMTLMMSGDKGISAFPDSDNLFKWIGTIKGADNTVYEGLSYKLSLEFPSGYPYQPPIVKFDTPCFHPNVDQFGNICLDILKEKWSALYDVRSVLLSIQSLLGEPNNASPLNLQAAELWSNQDVYRKVLKEKYSKAT 176
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.080e-55 Identity = 90/139 (64.75%), Postives = 107/139 (76.98%), Query Frame = 1
Query: 757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
RLQQELM +M D A+AFP+ DNLF W+ + G +T Y+GL+YKL + FP YPY P I F TPCFHPNVD HGNICLDILKEKWS+ +SVSTIL SLRSLL+DPNNDSPLN AA LW +QE+Y++V L+KY E
Sbjct: 15 RLQQELMQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKKYDE 153
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A6J8EP90_MYTCO (UBE2C n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8EP90_MYTCO) HSP 1 Score: 196 bits (498), Expect = 1.690e-55 Identity = 89/149 (59.73%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 739 SYLYNLRLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECVSE 1185
++ + RLQQELM+++ S DPG SAFP++DNLF+W AT+ G T YDGL YKL L FP YPY+ P + FE+PC+HPNVD+HGNICLDILKEKWS+ + V TIL SL+SLL +PN DSPLN +AA LW +QE Y++V L+KY + V++
Sbjct: 30 NHSVSKRLQQELMTLLTSGDPGISAFPDNDNLFKWIATVNGAKGTVYDGLRYKLTLDFPSGYPYQAPTVRFESPCYHPNVDKHGNICLDILKEKWSALYDVRTILLSLQSLLGEPNIDSPLNVQAADLWKNQEGYKKVLLEKYDQEVTK 178
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI) HSP 1 Score: 196 bits (497), Expect = 2.350e-55 Identity = 87/138 (63.04%), Postives = 110/138 (79.71%), Query Frame = 1
Query: 757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQ 1170
RLQ ELM++MM DPG SAFP DN+F+W T+ G TAY+G +Y+L L FP YPYKPP + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+QE++R++ + Y+
Sbjct: 42 RLQSELMALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLYK 179
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A5A8DJT4_CAFRO (UBC core domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJT4_CAFRO) HSP 1 Score: 195 bits (495), Expect = 4.030e-55 Identity = 86/141 (60.99%), Postives = 112/141 (79.43%), Query Frame = 1
Query: 757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQECV 1179
RLQ ELM ++M+A+PG SAFP DNLFEW T+ G +T ++G+ ++++LVFP YP+K P +TFETP FHPNVDE GNICLDILKE+WS+A+SV T+L S+RSLL +PNNDSPLN AA LW +Q +YR+VC+ KY+E
Sbjct: 32 RLQAELMQLVMAAEPGVSAFPAGDNLFEWIGTIDGSKETVFEGMKFQMRLVFPAQYPFKAPQVTFETPVFHPNVDESGNICLDILKEEWSAAYSVKTLLVSIRSLLGEPNNDSPLNAHAAGLWDNQAEYRRVCVAKYEEAT 172
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Match: A0A4Y7LQC3_9CRUS (EOG090X0DZY n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LQC3_9CRUS) HSP 1 Score: 194 bits (494), Expect = 6.600e-55 Identity = 90/139 (64.75%), Postives = 106/139 (76.26%), Query Frame = 1
Query: 757 RLQQELMSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYPYKPPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAHLWADQEKYRQVCLQKYQE 1173
RLQQELMS+MMS D G SAFPN D++F W T+KG T Y+GL YKL L FP YP+ P + F TPCFHPNVD HGNICLDILK+KWS+ + V TIL S++SLL DPNNDSPLN +AA LWA+Q Y+QV L K+QE
Sbjct: 38 RLQQELMSLMMSGDKGISAFPNGDDVFSWIGTIKGPQGTVYEGLIYKLSLNFPNGYPFTAPTVKFVTPCFHPNVDTHGNICLDILKDKWSAMYDVRTILLSIQSLLGDPNNDSPLNMQAAQLWANQVAYKQVLLDKFQE 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84371.16051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84371.16051.1 >prot_H-elongata_contig84371.16051.1 ID=prot_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MSIMMSADPGASAFPNDDNLFEWTATLKGCDDTAYDGLTYKLKLVFPETYback to top mRNA from alignment at H-elongata_contig84371:2..2714- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84371.16051.1 ID=mRNA_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2713bp|location=Sequence derived from alignment at H-elongata_contig84371:2..2714- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84371:2..2714- >mRNA_H-elongata_contig84371.16051.1 ID=mRNA_H-elongata_contig84371.16051.1|Name=mRNA_H-elongata_contig84371.16051.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig84371:2..2714- (Himanthalia elongata Himel1 dioecious)back to top |