mRNA_H-elongata_contig84310.16045.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: D7G6C7_ECTSI (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C7_ECTSI) HSP 1 Score: 236 bits (603), Expect = 8.860e-75 Identity = 117/148 (79.05%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 444
VYL KRIPPEAGLGGGSANAATALFAAN+LAG PASL DLQ+WSAELGSDITFFLSTGTCYCTGRGE+LHPQ+PLP T VWLVKP++GLST VF HLDYDQLSR+EP+ LL+QF ++GL +A +VNDLE PAFKAMPSL+ +K+EL
Sbjct: 172 VYLSKRIPPEAGLGGGSANAATALFAANKLAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEVLHPQEPLPQTRVWLVKPNKGLSTPVVFRHLDYDQLSRIEPAGLLKQFI-EEGLAEADYVNDLELPAFKAMPSLQTMKEEL 318
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S3YEW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEW3_HETAK) HSP 1 Score: 190 bits (482), Expect = 5.550e-57 Identity = 96/151 (63.58%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTT--QQGLVDAHFVNDLESPAFKAMPSLRQIKQELK 447
V LDKR+P + GLGGGS N ATA FAANEL G PA+L DL+ WSAELGSDITFF S GTCYCTGRGE+LHPQ PLPP+ +LVKP EGLST VF +LDY LS +P ++L FT +GL A +VNDLE PAFK MP+L ++K +L+
Sbjct: 186 VDLDKRVPAQGGLGGGSGNCATAFFAANELCGAPAALGDLEAWSAELGSDITFFFSRGTCYCTGRGEVLHPQAPLPPSVCYLVKPEEGLSTPLVFKNLDYALLSPADPEEVLATFTGGGDRGLYGATYVNDLEPPAFKVMPALAELKADLR 336
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A835Z2M9_9STRA (4-diphosphocytidyl-2c-methyl-d-erythritol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M9_9STRA) HSP 1 Score: 179 bits (454), Expect = 5.430e-53 Identity = 90/149 (60.40%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPP-TSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 444
V+LDK IP +AG+GGGS +AAT LFAANEL G PA+ L WS +LGSDITFFLS+GTCYCTGRGE+LHPQ + VWL+KP EGLST VF HLDY++LS +P +LL+ F +G+ A ++NDLE PAFKA+P L+Q+KQ++
Sbjct: 109 VHLDKLIPAQAGMGGGSGDAATTLFAANELTGCPATPEQLVAWSGDLGSDITFFLSSGTCYCTGRGEVLHPQPNIQAYKKVWLIKPEEGLSTPMVFKHLDYNELSSEDPLELLKSFQ-DKGIEGATYLNDLEPPAFKALPMLKQMKQDM 256
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S2V6H6_9STRA (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6H6_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.240e-49 Identity = 81/133 (60.90%), Postives = 105/133 (78.95%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESP 399
VYLDK +P +AGLGGGSANAATA+FAANEL G PAS++DL++WSA++GSDITFF S G+CYCTGRGEIL P P+P V+LVKPSEGL T VF +L+ ++ S+ +P ++LE F + L A+++NDLE P
Sbjct: 25 VYLDKNVPAQAGLGGGSANAATAMFAANELTGSPASMKDLELWSADIGSDITFFFSCGSCYCTGRGEILDPVDPIPTYPVYLVKPSEGLPTPLVFKNLNLEENSKEDPLQVLETF--KGDLFKANYINDLEKP 155
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S4C8S3_9EUGL (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8S3_9EUGL) HSP 1 Score: 165 bits (418), Expect = 3.640e-46 Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAH----FVNDLESPAFKAMPSLRQIKQEL 444
V L+K++P +AGLGGGS NAAT L+A NEL GRPA+L L WS LGSDITFFLS GT YCTGRGEIL P PLPP ++L KP GLST VF LDY+ LS +P LL QF Q V A +VNDLE PAF+ +P L IK+EL
Sbjct: 259 VRLEKKVPAQAGLGGGSGNAATTLWAVNELYGRPATLEQLVEWSGALGSDITFFLSGGTAYCTGRGEILTPLPPLPPQRIYLFKPDIGLSTPAVFKALDYEALSPADPEDLLAQFQAAQPDVAAASRDIYVNDLEPPAFRLVPELAAIKEEL 410
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A2V3J5K4_9FLOR (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K4_9FLOR) HSP 1 Score: 159 bits (403), Expect = 2.320e-45 Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 444
V L+KR+P EAGLGGGSANAATAL+AAN+L+G+P + L + A+ GSDI+FFLS GT YCTGRGEI+ LPP ++++VKP EGLST VF ++D + S +P +LL + Q+G++ A FVNDLE+P+F+ MP L+ +K++L
Sbjct: 110 VRLEKRVPHEAGLGGGSANAATALWAANQLSGKPCTAEQLAEFGADFGSDISFFLSEGTAYCTGRGEIMEFVPRLPPQALYIVKPYEGLSTAEVFKNMDLSECSEKDPRELLRKM--QKGVIFADFVNDLETPSFRLMPRLKTLKEDL 255
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S2LLF5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLF5_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.520e-45 Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1
Query: 7 LDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPP-TSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAH---FVNDLESPAFKAMPSLRQIKQEL 444
L K +P +AGLGGGS NAA AL+ ANEL GRPA+L L WS +LGSDITFFLS GT YCTGRGEI+ P PLP +V++VKP GLST +VF LDYD LS ++P ++L F T+ G+ ++ FVNDLE PAFK +P L+++K +L
Sbjct: 152 LVKHVPHQAGLGGGSGNAAAALYGANELLGRPATLEQLVEWSGDLGSDITFFLSEGTAYCTGRGEIMTPVDPLPAGQTVYIVKPDIGLSTPSVFKALDYDLLSTLDPEEILNVFMTE-GVTTSNQSVFVNDLEPPAFKVVPELKELKDDL 300
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A1M3CW31_9CHLA (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chlamydiales bacterium 38-26 TaxID=1895743 RepID=A0A1M3CW31_9CHLA) HSP 1 Score: 158 bits (400), Expect = 2.970e-45 Identity = 85/148 (57.43%), Postives = 104/148 (70.27%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 444
V+L+K IP EAGLGGGS+NAAT L+A NEL R L+DL WSAE+GSDITFF S GT YCTGRGEI++ PLP S+W+ KP++GLST VF HLD QLS +P + L F + L H+ NDLE PAF+ P+L IKQ+L
Sbjct: 95 VHLEKHIPYEAGLGGGSSNAATTLWALNELHSRAYPLQDLMTWSAEIGSDITFFFSNGTAYCTGRGEIINSLNPLPRESLWIAKPAQGLSTPAVFKHLDLTQLSLHDPERTLIGFYNGRPL---HY-NDLEEPAFRIDPTLHHIKQQL 238
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: B8BTG9_THAPS (4-diphosphocytidyl-2c-methyl-d-erythritol kinase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTG9_THAPS) HSP 1 Score: 158 bits (399), Expect = 4.900e-45 Identity = 87/151 (57.62%), Postives = 111/151 (73.51%), Query Frame = 1
Query: 7 LDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHP-QKPLPPTS-VWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDA---HFVNDLESPAFKAMPSLRQIKQEL 444
L KR+P +AGLGGGSANAATA++ ANEL G+PA+L +L WS ELGSDITFFLS GT YCTGRGE++ P PLP S + +VKP GLST VFS LDY+QLS +P +LL F + G+VD +++NDLE PAF +P L+ +K++L
Sbjct: 88 LFKRVPAQAGLGGGSANAATAMWGANELMGKPATLGELIEWSGELGSDITFFLSRGTAYCTGRGEVMTPIDPPLPSGSKLSIVKPDLGLSTPKVFSALDYEQLSAEDPEELLNTFL-EFGVVDTDDEYYINDLEQPAFDCLPELKALKEDL 237
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: R7Q8C9_CHOCR (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8C9_CHOCR) HSP 1 Score: 155 bits (391), Expect = 5.710e-44 Identity = 78/149 (52.35%), Postives = 111/149 (74.50%), Query Frame = 1
Query: 1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQELK 447
V L+KR+P +AGLGGGSANAATAL+AAN LA +P + + L + AE GSD++FFLS+GT YCTGRGE+L +PLP S++++KP+EGLST VF L + S +P +LL++ + G++ A +VNDLE P+FK +P L ++K++LK
Sbjct: 110 VRLEKRVPFQAGLGGGSANAATALWAANVLADKPCTNKQLAEFGAEFGSDVSFFLSSGTAYCTGRGEVLEDVQPLPQESLFIIKPNEGLSTAEVFKTLKMEDCSDRDPRQLLDKM--RAGVISAEYVNDLEVPSFKLLPRLAELKEKLK 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84310.16045.1 >prot_H-elongata_contig84310.16045.1 ID=prot_H-elongata_contig84310.16045.1|Name=mRNA_H-elongata_contig84310.16045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDback to top mRNA from alignment at H-elongata_contig84310:1178..2190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84310.16045.1 ID=mRNA_H-elongata_contig84310.16045.1|Name=mRNA_H-elongata_contig84310.16045.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1013bp|location=Sequence derived from alignment at H-elongata_contig84310:1178..2190- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84310:1178..2190- >mRNA_H-elongata_contig84310.16045.1 ID=mRNA_H-elongata_contig84310.16045.1|Name=mRNA_H-elongata_contig84310.16045.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig84310:1178..2190- (Himanthalia elongata Himel1 dioecious)back to top |