prot_H-elongata_contig8429.16044.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig8429.16044.1
Unique Name	prot_H-elongata_contig8429.16044.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	106

Homology

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: D7FM89_ECTSI (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM89_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 6.970e-53
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALRGLH 105
            + S  ELDK+T+DNKDKLVV+DYSTTWCGPCKM+LPK+E LAEQYS +VF+KVIGDS+++AS LMKREGVRSVPSFHFWK GKK++ V GANEE LE+ LR  H
Sbjct:   20 IGSFAELDKLTSDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKVIGDSTNDASQLMKREGVRSVPSFHFWKDGKKVEKVNGANEEALEQTLRDFH 123

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A6H5K2L8_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L8_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 2.390e-52
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALRGLH 105
            + S  ELDK+T+DNKDKLVV+DYSTTWCGPCKM+LPK+E LAEQYS +VF+KVIGDS+++AS LMKREGVRSVPSFHFWK GKK++ V GANEE LE+ LR  H
Sbjct:   59 IGSFAELDKLTSDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKVIGDSTNDASQLMKREGVRSVPSFHFWKDGKKVEKVNGANEEALEQTLRDFH 162

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A7S0Z4I3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z4I3_9CRYP)

HSP 1 Score: 144 bits (364), Expect = 2.900e-42
Identity = 63/101 (62.38%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            + ++ ELD +   + DKLVVIDYSTTWCGPCK+V PKYEAL++ Y+ +VFLK IGDSS+EA+ LMKREG+RSVP+FHFWKGG+K++ + GAN E LE  ++
Sbjct:   51 ITTAGELDDVVKSSGDKLVVIDYSTTWCGPCKIVAPKYEALSDVYTDAVFLKCIGDSSAEATALMKREGIRSVPAFHFWKGGEKVEVIAGANVEALENTIK 151

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A7S1MTD0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MTD0_HEMAN)

HSP 1 Score: 144 bits (364), Expect = 3.170e-42
Identity = 63/101 (62.38%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            + ++ ELD +   + DKLVVIDYSTTWCGPCK+V PKYEAL+E Y+ +VFLK IGDSS++A+ LMKREG+RSVP+FHFWKGG+K++ + GAN E LE  ++
Sbjct:   54 ITTAGELDDVVKSSGDKLVVIDYSTTWCGPCKIVAPKYEALSEVYTDAVFLKCIGDSSADATALMKREGIRSVPAFHFWKGGEKVEVIAGANVEALENTIK 154

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A835ZHZ2_9STRA (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHZ2_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.520e-41
Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0

Query:    1 QVNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            +V+S + LDK  A     LVV+DYSTTWCGPCK++ PKYE L+ +Y+ +VFLKVIGDSS  A+ LMKREGVRSVPSFHFWK GKK+D V GAN E LE  +R
Sbjct:   47 EVDSEEALDKTIAAAGSGLVVVDYSTTWCGPCKVIFPKYEELSNKYTNAVFLKVIGDSSQAATKLMKREGVRSVPSFHFWKDGKKVDQVNGANSEALETTIR 148

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: B8BVB7_THAPS (Thioredoxin f n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVB7_THAPS)

HSP 1 Score: 136 bits (343), Expect = 3.330e-39
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            VNS  E D   +   DKLVVIDYSTTWCGPCK++ PK++ L++QY  SVF+KVIGD+S +AS LMKREGVRSVPSFH++K G K+D V GAN E +E A++
Sbjct:   41 VNSEAEFDAKVSGAGDKLVVIDYSTTWCGPCKVIAPKFDELSDQYPDSVFIKVIGDASPDASKLMKREGVRSVPSFHYFKNGSKVDVVNGANAEAIEAAIK 141

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A6U0YZC0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0YZC0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.020e-39
Identity = 63/102 (61.76%), Postives = 83/102 (81.37%), Query Frame = 0

Query:    1 QVNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            +V+S  E D++ A + D LVV+DYSTTWCGPCK++ PK+ AL+++  Q+VFLKV+GDSS+EAS LMKREGVRSVPSFHFWK  ++++ V GAN E LE +LR
Sbjct:   58 EVSSEAEFDQVMASSGDALVVVDYSTTWCGPCKVMEPKFVALSDETPQAVFLKVVGDSSAEASKLMKREGVRSVPSFHFWKNKERLEVVNGANTEALEGSLR 159

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A6S9BEG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BEG3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.360e-38
Identity = 60/100 (60.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEAL 101
            ++S  + DK      D LVV+DYSTTWCGPCK++ PK++ L+EQYS +VF+KVIGD+S +AS LMKREGVRSVPSFH++KGG+K++ V GAN E +E A+
Sbjct:   48 IDSEAKFDKTIESAGDSLVVVDYSTTWCGPCKVIAPKFDELSEQYSDAVFVKVIGDASPDASKLMKREGVRSVPSFHYFKGGEKVEVVNGANAEAIEAAI 147

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A7R9U0I5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0I5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.430e-38
Identity = 60/101 (59.41%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    1 QVNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEAL 101
            ++  +D+ DK  +   D +VV+DYSTTWCGPCK++ P +  L+E++  +VFLKVIGDSS+EA+ LMKREGVRSVP+FHFWKGG+K+D V GAN + LE AL
Sbjct:   46 EIGDTDKFDKALSAAGDAVVVVDYSTTWCGPCKVIAPFFAELSEKHQDTVFLKVIGDSSAEATKLMKREGVRSVPAFHFWKGGEKVDIVSGANPDALEGAL 146

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BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Match: A0A7S1FX09_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FX09_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.170e-37
Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0

Query:    2 VNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSVFLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEALR 102
            + S    DK      D LVVIDYSTTWCGPCK++ PKY+ L+++Y  +VFLKVIGDSS++AS LMKREGVRSVPSFH++K G K++ V GAN E +E A++
Sbjct:   53 IGSEAAFDKTIGGAGDALVVIDYSTTWCGPCKVIAPKYDELSDKYPDAVFLKVIGDSSADASKLMKREGVRSVPSFHYYKNGNKVEVVNGANAEAIEAAIK 153

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8429.16044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FM89_ECTSI	6.970e-53	74.04	Flagellar outer arm dynein 14 kDa light chain LC5 ...	[more]
A0A6H5K2L8_9PHAE	2.390e-52	74.04	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S0Z4I3_9CRYP	2.900e-42	62.38	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]
A0A7S1MTD0_HEMAN	3.170e-42	62.38	Hypothetical protein n=2 Tax=Hemiselmis andersenii...	[more]
A0A835ZHZ2_9STRA	1.520e-41	64.71	Flagellar outer arm dynein 14 kDa light chain LC5 ...	[more]
B8BVB7_THAPS	3.330e-39	62.38	Thioredoxin f n=1 Tax=Thalassiosira pseudonana Tax...	[more]
A0A6U0YZC0_9STRA	4.020e-39	61.76	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6S9BEG3_9STRA	2.360e-38	60.00	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7R9U0I5_9STRA	2.430e-38	59.41	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S1FX09_9STRA	3.170e-37	59.41	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 70..81 score: 32.59 coord: 28..37 score: 61.5 coord: 20..28 score: 30.56
None	No IPR available	GENE3D	3.40.30.10		coord: 1..105 e-value: 2.8E-28 score: 100.1
None	No IPR available	PANTHER	PTHR46115	FAMILY NOT NAMED	coord: 1..102
None	No IPR available	PANTHER	PTHR46115:SF1	THIOREDOXIN-LIKE PROTEIN 1	coord: 1..102
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 10..101 e-value: 4.7E-20 score: 71.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..105 score: 12.555
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 21..39
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 2..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8429	contig	H-elongata_contig8429:6913..7991 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8429.16044.1	mRNA_H-elongata_contig8429.16044.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig8429 6913..7991 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig8429.16044.1 ID=prot_H-elongata_contig8429.16044.1|Name=mRNA_H-elongata_contig8429.16044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
QVNSSDELDKITADNKDKLVVIDYSTTWCGPCKMVLPKYEALAEQYSQSV
FLKVIGDSSSEASVLMKREGVRSVPSFHFWKGGKKIDSVQGANEEDLEEA
LRGLH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS
IPR036249	Thioredoxin-like_sf