prot_H-elongata_contig84277.16041.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84277.16041.1
Unique Nameprot_H-elongata_contig84277.16041.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: D8LSU0_ECTSI (Similar to helicase, lymphoid-specific isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU0_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 1.330e-114
Identity = 179/213 (84.04%), Postives = 196/213 (92.02%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAASK-DKDTASTISGILKRAIQIHIAS 213
            KE+ GYSDFD+HQ+CS FDSL+HLCL EETLFTSAKM RLR LLP+L+S+GHRILLFSQWTRLLDL EVLL +SMG+ FCRLDGSTPVSERKALID+FGADTSIPVFLLSTRAGGLGINLT ADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVI+MVA GTVDEDIY MGERKKE+N+ VLND+  K +KD ASTISGILKRAIQ+H+ S
Sbjct:  730 KEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRALLPQLVSEGHRILLFSQWTRLLDLLEVLLGESMGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIRMVAAGTVDEDIYLMGERKKEVNQRVLNDSGKKGEKDAASTISGILKRAIQVHVGS 942          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A6H5KRD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD4_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 5.130e-111
Identity = 179/217 (82.49%), Postives = 196/217 (90.32%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFE----VLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAASK-DKDTASTISGILKRAIQIHIAS 213
            KE+ GYSDFD+HQ+CS FDSL+HLCL EETLFTSAKM RLR LLP+L+S+GHR+LLFSQWTRLLDL E    VLL DSMG+ FCRLDGSTPVSERKALID+FGADTSIPVFLLSTRAGGLGINLT ADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVI+MVA GTVDEDIY MGERKKE+N+ VLND+  K +KD ASTISGILKRAIQ+H+ S
Sbjct:  994 KEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFTSAKMERLRTLLPQLVSEGHRVLLFSQWTRLLDLLEASAHVLLGDSMGMTFCRLDGSTPVSERKALIDKFGADTSIPVFLLSTRAGGLGINLTAADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIRMVAAGTVDEDIYLMGERKKEVNQRVLNDSGKKGEKDAASTISGILKRAIQVHVGS 1210          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A7S3H645_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H645_9STRA)

HSP 1 Score: 255 bits (651), Expect = 6.510e-81
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 0
Query:    3 EIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLND 187
            EI  +SDFDIHQ+C  +D+L  L L E+ L+ S KM  L+D LPKL S GHR+L+FSQWTRLLDL EVLLQD + L + RLDGSTPV +R+ LID F  DTSIPVFLLST+AGGLGINLT ADTV+LHD+DFNPEND+QAEDRCHRIGQTKPVTV K+ A+ +VDEDI+ MGERK +L+K+VL D
Sbjct:  130 EINTFSDFDIHQLCLEYDALNSLQLTEDVLYDSPKMHWLKDNLPKLKSDGHRVLVFSQWTRLLDLLEVLLQD-INLTYLRLDGSTPVKQRQDLIDTFNTDTSIPVFLLSTKAGGLGINLTAADTVVLHDLDFNPENDKQAEDRCHRIGQTKPVTVYKLFAKDSVDEDIFEMGERKSKLSKAVLQD 313          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A835Z3Y7_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y7_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.180e-73
Identity = 132/212 (62.26%), Postives = 165/212 (77.83%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAASKDKDT-----ASTISGILKRAIQ 208
            KE++ +SD+D+HQ+CS F +L  L L ++ LF+SAKM RLR LLP+L +QGHR+LLFSQWTR+LDL EV L + +G+++ RLDGSTPV +R+ALI  F AD  I VFLLSTRAGGLGINLT ADTVILHD+DFNPEND+QAEDR   IGQTKPV VIK+VA+GTVDEDIY +G RK  ++ +VL++ A   K         TI+GIL RAI+
Sbjct:  952 KELETFSDYDMHQLCSHFPALEDLTLQQDALFSSAKMVRLRGLLPELQAQGHRVLLFSQWTRILDLMEVFLSEVLGMRYTRLDGSTPVQQRQALIQGFAADPGIAVFLLSTRAGGLGINLTSADTVILHDLDFNPENDKQAEDR---IGQTKPVRVIKLVAQGTVDEDIYRLGARKASVSAAVLDEVAPGKKGAQGDADGGTIAGILNRAIR 1160          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A7S3US29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US29_HETAK)

HSP 1 Score: 229 bits (585), Expect = 4.720e-72
Identity = 114/191 (59.69%), Postives = 144/191 (75.39%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAASKD 192
            KEI+GYSD+D+H +C+    L    L E+T+  SAK  +L +LLP++   GHR+LLFSQWTR+LDL EV LQ  +G+ F RLDGST V  R+ALI++F  DT IPVFLLSTRAGGLGINLT AD V+LHD+D+NP ND+QAEDRCHRIGQT+PVTVIK+VA+ TVD+ IY++G  K  +   VL +    D
Sbjct:   65 KEIEGYSDYDLHHLCAQHPELGKYELGEDTIMNSAKFRKLEELLPQMQKDGHRVLLFSQWTRILDLLEVFLQSRLGMGFLRLDGSTDVKSRQALIEKFN-DTDIPVFLLSTRAGGLGINLTAADAVVLHDLDWNPTNDQQAEDRCHRIGQTRPVTVIKLVAQDTVDQAIYDIGHCKAAVTAKVLGEEEDDD 254          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A2D4BWW0_PYTIN (Helicase C-terminal domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWW0_PYTIN)

HSP 1 Score: 235 bits (600), Expect = 7.200e-72
Identity = 120/187 (64.17%), Postives = 146/187 (78.07%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTF---DSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVL 185
            KEI+GYSDF++H +C  +   D L+ L LP E L  SAK   LRDLLPKL ++GHR+L+FSQWT+LLDL EVL+   M  ++ RLDGST V+ER+ LID +  DT+I VFLLSTRAGGLGINLT ADTVILHD+DFNP ND QA DRCHRIGQTKPV++ K+V+E TVD DIY +GE K +LN +VL
Sbjct:  280 KEIEGYSDFELHDLCVQYGGIDELKQLQLPIEALLESAKFDLLRDLLPKLKTEGHRVLIFSQWTKLLDLLEVLMSH-MDYRYLRLDGSTEVAERQGLIDTYNQDTNIFVFLLSTRAGGLGINLTAADTVILHDLDFNPTNDEQACDRCHRIGQTKPVSIYKLVSEDTVDHDIYRLGESKTQLNNAVL 465          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A2D4CG48_PYTIN (ATP-dependent helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG48_PYTIN)

HSP 1 Score: 235 bits (600), Expect = 8.890e-69
Identity = 120/187 (64.17%), Postives = 146/187 (78.07%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTF---DSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVL 185
            KEI+GYSDF++H +C  +   D L+ L LP E L  SAK   LRDLLPKL ++GHR+L+FSQWT+LLDL EVL+   M  ++ RLDGST V+ER+ LID +  DT+I VFLLSTRAGGLGINLT ADTVILHD+DFNP ND QA DRCHRIGQTKPV++ K+V+E TVD DIY +GE K +LN +VL
Sbjct:  691 KEIEGYSDFELHDLCVQYGGIDELKQLQLPIEALLESAKFDLLRDLLPKLKTEGHRVLIFSQWTKLLDLLEVLMSH-MDYRYLRLDGSTEVAERQGLIDTYNQDTNIFVFLLSTRAGGLGINLTAADTVILHDLDFNPTNDEQACDRCHRIGQTKPVSIYKLVSEDTVDHDIYRLGESKTQLNNAVL 876          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A8K1FHG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHG0_PYTOL)

HSP 1 Score: 234 bits (597), Expect = 6.290e-68
Identity = 119/187 (63.64%), Postives = 148/187 (79.14%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTF---DSLRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVL 185
            KE++GYSDF++H +C  +   + LR L LP ETL  SAK   LR LLPKL S+GHR+L+FSQWT+LLDL EVL++D M  ++ RLDGST VS+R+ LID +  DT++ VFLLSTRAGGLGINLT ADTVILHD+DFNP ND QA DRCHRIGQTKPV++ K+V+E TVD +IY +GE K +LN +VL
Sbjct:  807 KELEGYSDFELHDLCVQYGGNEELRKLQLPMETLLHSAKFDFLRTLLPKLRSEGHRVLIFSQWTKLLDLLEVLMRD-MDYRYLRLDGSTDVSDRQQLIDEYNQDTNLFVFLLSTRAGGLGINLTAADTVILHDLDFNPTNDEQACDRCHRIGQTKPVSIYKLVSEDTVDHNIYKLGEAKTQLNNAVL 992          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A7S2A6Z7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Z7_TRICV)

HSP 1 Score: 214 bits (546), Expect = 1.890e-67
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 0
Query:   35 SAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAAS 190
            S K  RLRDLLP+L S+GHR+L+FSQWTR LDL   L+ DS+G +F RLDG TP++ER+ LID F  DTSIPVFLLSTRAGG+GINLT ADT ILHD+DFNP ND QAEDRCHRIGQ +PVT+IKMV EGTVD DIY M ERK ++N ++L + +S
Sbjct:    1 SPKFVRLRDLLPRLSSEGHRMLVFSQWTRCLDLLGCLM-DSIGFRFLRLDGQTPIAERQGLIDEFNTDTSIPVFLLSTRAGGMGINLTAADTCILHDLDFNPFNDIQAEDRCHRIGQKRPVTIIKMVTEGTVDADIYKMQERKAKMNAAILENGSS 155          
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Match: A0A2P4YB21_9STRA (ATP-dependent helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YB21_9STRA)

HSP 1 Score: 222 bits (565), Expect = 7.200e-67
Identity = 113/187 (60.43%), Postives = 141/187 (75.40%), Query Frame = 0
Query:    2 KEIKGYSDFDIHQICSTFDS---LRHLCLPEETLFTSAKMSRLRDLLPKLISQGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFGADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIGQTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVL 185
            +E++ YSDF++H +C  +++   LR L LP E+L  SAK   LR LLPKL  +GHR+L+FSQWT+LLDL EVL+   M  ++ RLDGST V ER+ LID +  D +I VFLLSTRAGGLGINLT ADTVILHD+DFNP  D QA DRCHRIGQTKPV++ K+V+E TVD DIY +GE K +LN  +L
Sbjct:  250 QELESYSDFELHDLCVQYEAIEELRQLQLPMESLLASAKFDYLRKLLPKLQKEGHRVLIFSQWTKLLDLLEVLMSH-MEYRYLRLDGSTDVQERQGLIDTYNEDKNIFVFLLSTRAGGLGINLTAADTVILHDLDFNPTADEQACDRCHRIGQTKPVSIYKLVSENTVDHDIYKLGESKTDLNHKIL 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84277.16041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSU0_ECTSI1.330e-11484.04Similar to helicase, lymphoid-specific isoform 9 n... [more]
A0A6H5KRD4_9PHAE5.130e-11182.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3H645_9STRA6.510e-8169.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835Z3Y7_9STRA1.180e-7362.26SNF2 family N-terminal domain-containing protein n... [more]
A0A7S3US29_HETAK4.720e-7259.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2D4BWW0_PYTIN7.200e-7264.17Helicase C-terminal domain-containing protein n=1 ... [more]
A0A2D4CG48_PYTIN8.890e-6964.17ATP-dependent helicase, putative n=1 Tax=Pythium i... [more]
A0A8K1FHG0_PYTOL6.290e-6863.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2A6Z7_TRICV1.890e-6768.59Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A2P4YB21_9STRA7.200e-6760.43ATP-dependent helicase n=1 Tax=Phytophthora palmiv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 66..150
e-value: 5.8E-21
score: 85.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 37..150
e-value: 2.8E-20
score: 72.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 40..203
score: 16.728
NoneNo IPR availableGENE3D3.40.50.300coord: 11..214
e-value: 5.7E-69
score: 234.5
NoneNo IPR availablePANTHERPTHR10799:SF964SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1coord: 26..204
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 26..204
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84277contigH-elongata_contig84277:28..2596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84277.16041.1mRNA_H-elongata_contig84277.16041.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84277 28..2599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84277.16041.1 ID=prot_H-elongata_contig84277.16041.1|Name=mRNA_H-elongata_contig84277.16041.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MKEIKGYSDFDIHQICSTFDSLRHLCLPEETLFTSAKMSRLRDLLPKLIS
QGHRILLFSQWTRLLDLFEVLLQDSMGLKFCRLDGSTPVSERKALIDRFG
ADTSIPVFLLSTRAGGLGINLTCADTVILHDVDFNPENDRQAEDRCHRIG
QTKPVTVIKMVAEGTVDEDIYNMGERKKELNKSVLNDAASKDKDTASTIS
GILKRAIQIHIASSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase